version 1.0
Burkholderia mallei SAVP1 chromosome II, complete sequence - 1..1734922 1734 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1484 70.85 0 1481396..1482280 + 294 121597567 ispA BMASAVP1_1511 - geranyltranstransferase 1485 67.18 0 1482313..1484268 + 651 121596455 dxs BMASAVP1_1512 - 1-deoxy-D-xylulose-5-phosphate synthase 1486 65.83 0 1484395..1485228 + 277 121596571 - BMASAVP1_1514 - putative GTP cyclohydrolase 1487 69.96 0 1485180..1485452 - 90 121597053 - BMASAVP1_1513 - hypothetical protein 1488 71.30 0 1485619..1486698 - 359 121597113 gcp BMASAVP1_1515 - O-sialoglycoprotein endopeptidase 1489 70.02 0 1486799..1488022 + 407 121597749 - BMASAVP1_1516 - hypothetical protein 1490 59.15 -1 1488102..1488314 + 70 121596528 rpsU BMASAVP1_1517 - 30S ribosomal protein S21 1491 68.01 0 1488481..1488927 + 148 121597918 - BMASAVP1_1518 - GatB/Yqey family protein 1492 66.83 0 1489022..1490896 + 624 121596975 dnaG BMASAVP1_1519 - DNA primase 1493 64.13 0 1491172..1493382 + 736 121597172 rpoD BMASAVP1_1520 - RNA polymerase sigma factor RpoD 1494 63.70 0 1493804..1495285 + 493 121597964 - BMASAVP1_1522 - transposase 1495 62.45 -1 1495659..1496156 + 165 121597373 - BMASAVP1_1523 - A, transposase OrfB 1496 61.75 -1 1496184..1497017 - 277 121596759 - BMASAVP1_1524 - A, transposase OrfB 1497 57.20 -2 1497041..1497304 - 87 121597584 - BMASAVP1_1525 - transposase subfamily protein 1498 69.79 0 1497541..1497924 + 127 121596699 - BMASAVP1_1526 - hypothetical protein 1499 62.53 -1 1498197..1499138 + 313 121598104 - BMASAVP1_1527 - LysR family transcriptional regulator 1500 74.47 +1 1499152..1499292 - 46 121596648 - BMASAVP1_1528 - hypothetical protein 1501 73.33 0 1499417..1501096 + 559 121597903 - BMASAVP1_1529 - putative lipoprotein 1502 67.16 0 1501167..1501370 - 67 121597144 - BMASAVP1_1530 - hypothetical protein 1503 66.20 0 1501809..1503311 - 500 121596860 - BMASAVP1_1531 - amino acid/peptide transporter 1504 69.80 0 1503463..1503717 + 84 121596965 - BMASAVP1_1532 - hypothetical protein 1505 64.44 0 1503989..1504528 + 179 121597232 - BMASAVP1_1533 - DNA-binding protein 1506 64.92 0 1504664..1506328 + 554 121598126 oppA BMASAVP1_1534 - oligopeptide ABC transporter, periplasmic oligopeptide-binding protein 1507 67.09 0 1506346..1507284 + 312 121596530 oppB BMASAVP1_1535 - oligopeptide ABC transporter, permease protein OppB 1508 69.44 0 1507296..1508198 + 300 121597528 oppC BMASAVP1_1536 - oligopeptide ABC transporter, permease protein OppC 1509 68.18 0 1508200..1509189 + 329 121597354 oppD BMASAVP1_1537 - oligopeptide ABC transporter, ATP-binding protein OppD 1510 71.87 0 1509186..1510319 + 377 121596779 oppF BMASAVP1_1538 - oligopeptide ABC transporter, ATP-binding protein OppF 1511 65.78 0 1510477..1511937 + 486 121597615 - BMASAVP1_1539 - OprD family outer membrane porin 1512 73.40 0 1511962..1512258 + 98 121597947 - BMASAVP1_1540 - hypothetical protein 1513 70.59 0 1512269..1513261 - 330 121597952 - BMASAVP1_1541 - dedA family protein 1514 61.24 -1 1513253..1513381 + 42 121596967 - BMASAVP1_1542 - hypothetical protein 1515 65.93 0 1513416..1513688 - 90 121598045 - BMASAVP1_1543 - chromosome partitioning protein, ATP-binding subunit 1516 64.84 0 1513658..1513876 - 72 121597253 - BMASAVP1_1544 - hypothetical protein 1517 67.38 0 1514019..1515422 - 467 121596587 - BMASAVP1_1545 - hypothetical protein 1518 75.15 +1 1515448..1515612 + 54 121597727 - BMASAVP1_1546 - hypothetical protein 1519 69.27 0 1515709..1517247 + 512 121597047 - BMASAVP1_1548 - sigma-54 dependent DNA-binding transcriptional regulator 1520 61.11 -1 1517211..1517678 - 155 121597780 - BMASAVP1_1547 - hypothetical protein 1521 60.08 -1 1517599..1518099 + 166 121597042 - BMASAVP1_1549 - hypothetical protein 1522 55.33 -2 1518305..1518454 + 49 121597973 - BMASAVP1_1550 - hypothetical protein 1523 60.14 -1 1518557..1518847 + 96 121597229 - BMASAVP1_1551 - H-NS histone family protein 1524 57.14 -2 1518900..1519130 + 76 121597554 - BMASAVP1_1552 - hypothetical protein 1525 64.96 0 1519174..1520286 - 370 121596972 - BMASAVP1_1553 - hypothetical protein 1526 70.23 0 1520341..1522752 + 803 121597730 - BMASAVP1_1554 - acetyltransferase 1527 66.67 0 1522749..1522862 + 37 121598082 - BMASAVP1_1555 - hypothetical protein 1528 63.57 0 1523028..1523156 - 42 121596885 - BMASAVP1_1556 - hypothetical protein 1529 64.46 0 1523257..1523799 - 180 121597442 - BMASAVP1_1557 - hypothetical protein 1530 68.89 0 1523863..1523997 - 44 121597127 - BMASAVP1_1558 - hypothetical protein 1531 73.16 0 1523994..1525640 - 548 121597711 - BMASAVP1_1559 - indole acetimide hydrolase 1532 68.93 0 1525688..1526614 - 308 121596506 - BMASAVP1_1560 - IclR family transcriptional regulator 1533 80.70 +2 1526773..1526886 + 37 121596946 - BMASAVP1_1561 - hypothetical protein 1534 70.67 0 1527023..1527871 + 282 121597299 - BMASAVP1_1562 - fumarylacetoacetate hydrolase family protein 1535 68.68 0 1528055..1529197 - 380 121597553 lldD BMASAVP1_1563 - L-lactate dehydrogenase 1536 74.89 +1 1529262..1530185 - 307 121597305 - BMASAVP1_1564 - LysR family transcriptional regulator 1537 69.74 0 1530265..1530915 - 216 121598143 - BMASAVP1_1565 - hypothetical protein 1538 67.79 0 1530897..1532231 - 444 121597012 - BMASAVP1_1566 - major facilitator family transporter 1539 60.00 -1 1532738..1533082 + 114 121598003 - BMASAVP1_1567 - hypothetical protein 1540 65.86 0 1533573..1534694 - 373 121596862 iscS-2 BMASAVP1_1568 - cysteine desulfurase 1541 65.94 0 1534741..1535982 - 413 121597940 - BMASAVP1_1569 - major facilitator family transporter 1542 67.07 0 1535987..1536727 - 246 121596687 - BMASAVP1_1570 - metallo-beta-lactamase family protein 1543 64.30 0 1536800..1537474 + 224 121597660 - BMASAVP1_1571 - ArsR family transcriptional regulator 1544 59.33 -1 1537562..1537711 + 49 121597852 - BMASAVP1_1572 - hypothetical protein 1545 59.41 -1 1537799..1538239 + 146 121596926 - BMASAVP1_1573 - hypothetical protein 1546 70.30 0 1538342..1538506 + 54 121597146 - BMASAVP1_1575 - hypothetical protein 1547 70.17 0 1538470..1539411 - 313 121597929 - BMASAVP1_1574 - LysR family transcriptional regulator 1548 70.94 0 1539508..1539975 + 155 121598025 - BMASAVP1_1576 - D-serine ammonia-lyase 1549 72.91 0 1539975..1540823 + 282 121596663 - BMASAVP1_1577 - D-serine dehydratase 1550 72.68 0 1540994..1541908 - 304 121597725 - BMASAVP1_1578 - LysR family transcriptional regulator 1551 66.67 0 1541837..1541950 + 37 121596494 - BMASAVP1_1579 - hypothetical protein 1552 70.78 0 1542090..1542794 + 234 121596920 - BMASAVP1_1580 - short chain dehydrogenase/reductase family oxidoreductase 1553 71.74 0 1542791..1543066 + 91 121596744 - BMASAVP1_1581 - protamine P1 1554 70.83 0 1543316..1543483 - 55 121597312 - BMASAVP1_1582 - hypothetical protein 1555 72.64 0 1543541..1543858 - 105 121598165 - BMASAVP1_1583 - hypothetical protein 1556 71.43 0 1543838..1543963 + 41 121597201 - BMASAVP1_1584 - hypothetical protein 1557 63.49 0 1544168..1545490 - 440 121597928 - BMASAVP1_1585 - hypothetical protein 1558 75.81 +1 1545677..1545862 - 61 121597706 - BMASAVP1_1586 - hypothetical protein 1559 71.96 0 1545890..1547779 + 629 121598122 - BMASAVP1_1587 - hypothetical protein 1560 71.54 0 1547822..1549258 - 478 121597531 - BMASAVP1_1588 - FHA domain-containing protein 1561 68.33 0 1549313..1549672 - 119 121596783 - BMASAVP1_1589 - putative lipoprotein 1562 65.70 0 1550354..1550872 + 172 121597771 - BMASAVP1_1590 - putative lipoprotein 1563 70.30 0 1550869..1552272 + 467 121596990 - BMASAVP1_1591 - hypothetical protein 1564 72.82 0 1552288..1553604 + 438 121596826 - BMASAVP1_1592 - hypothetical protein 1565 70.85 0 1553607..1557236 + 1209 121596568 - BMASAVP1_1593 - putative lipoprotein 1566 73.52 0 1557233..1557757 + 174 121597602 - BMASAVP1_1594 - hypothetical protein 1567 75.16 +1 1557754..1557906 + 50 121596790 - BMASAVP1_1595 - hypothetical protein 1568 74.26 +1 1557912..1558148 + 78 121596709 - BMASAVP1_1597 - hypothetical protein 1569 71.93 0 1558133..1558360 - 75 121597653 - BMASAVP1_1596 - hypothetical protein 1570 74.12 +1 1558359..1560947 + 862 121598059 - BMASAVP1_1598 - serine/threonine protein kinase 1571 73.33 0 1561000..1562079 + 359 121596921 - BMASAVP1_1599 - hypothetical protein 1572 65.98 0 1562142..1562720 + 192 121596549 - BMASAVP1_1600 - hypothetical protein 1573 65.87 0 1562713..1564221 + 502 121597320 - BMASAVP1_1601 - hypothetical protein 1574 64.84 0 1564281..1564772 + 163 121596796 - BMASAVP1_1602 - hypothetical protein 1575 73.26 0 1564791..1565351 + 186 121597728 - BMASAVP1_1603 - hypothetical protein 1576 71.21 0 1565356..1567227 + 623 121598163 - BMASAVP1_1604 - hypothetical protein 1577 72.55 0 1567224..1568702 + 492 121597169 - BMASAVP1_1605 - hypothetical protein 1578 70.21 0 1568681..1571335 + 884 121596799 - BMASAVP1_1606 - putative ATP-dependent Clp protease, ATP-binding subunit ClpB 1579 65.22 0 1571332..1573536 + 734 121597925 - BMASAVP1_1607 - Rhs element Vgr protein 1580 65.14 0 1573611..1574264 + 217 121596656 - BMASAVP1_1608 - hypothetical protein 1581 61.03 -1 1574206..1575252 + 348 121597339 - BMASAVP1_1609 - YD repeat-containing protein 1582 61.75 -1 1575280..1576113 - 277 121597189 - BMASAVP1_1610 - IS407A, transposase OrfB 1583 57.20 -2 1576137..1576400 - 87 121596662 - BMASAVP1_1611 - IS407A, transposase OrfA 68.39 MEAN 5.20 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0