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Burkholderia mallei SAVP1 chromosome II, complete sequence - 1..1734922 1734 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1255 70.32 0 1276557..1277021 - 154 121597637 - BMASAVP1_1278 - hypothetical protein 1256 69.44 0 1277086..1277733 + 215 121597440 - BMASAVP1_1280 - OsmY domain-containing protein 1257 63.01 -1 1277748..1278185 + 145 121597057 - BMASAVP1_1281 - 6-phosphofructokinase 1258 73.85 +1 1278299..1279258 + 319 121598027 pfk BMASAVP1_1282 - 6-phosphofructokinase 1259 73.19 0 1279255..1279392 + 45 121597192 - BMASAVP1_1283 - hypothetical protein 1260 73.68 +1 1279416..1279586 + 56 121597600 - BMASAVP1_1284 - hypothetical protein 1261 72.18 0 1279891..1281069 - 392 121596773 ackA BMASAVP1_1285 - acetate kinase 1262 71.79 0 1281066..1282469 - 467 121597698 - BMASAVP1_1286 - bifunctional enoyl-CoA hydratase/phosphate acetyltransferase 1263 68.51 0 1282480..1284273 - 597 121596889 phbC BMASAVP1_1287 - poly-beta-hydroxybutyrate polymerase 1264 71.60 0 1284264..1284425 + 53 121597912 - BMASAVP1_1288 - hypothetical protein 1265 74.02 +1 1284634..1286238 + 534 121597143 atpD BMASAVP1_1289 - F0F1 ATP synthase subunit beta 1266 74.56 +1 1286228..1286683 + 151 121598127 atpC-2 BMASAVP1_1291 - F0F1 ATP synthase subunit epsilon 1267 78.66 +1 1286680..1287171 + 163 121597495 - BMASAVP1_1292 - putative ATP synthase gene 1 1268 75.08 +1 1287164..1287472 + 102 121596585 - BMASAVP1_1293 - hypothetical protein 1269 68.95 0 1287469..1288170 + 233 121597389 atpB-2 BMASAVP1_1294 - F0F1 ATP synthase subunit A 1270 68.25 0 1288167..1288418 + 83 121597576 atpE-2 BMASAVP1_1295 - F0F1 ATP synthase subunit C 1271 74.93 +1 1288432..1289181 + 249 121596853 - BMASAVP1_1296 - ATP synthase F0, B subunit 1272 73.77 +1 1289165..1291177 + 670 121596459 atpA-2 BMASAVP1_1297 - F0F1 ATP synthase subunit alpha 1273 73.38 0 1291174..1292022 + 282 121596697 - BMASAVP1_1299 - putative ATP synthase F1, gamma subunit 1274 72.50 0 1292017..1292136 - 39 121597694 - BMASAVP1_1298 - hypothetical protein 1275 67.84 0 1292237..1293262 + 341 121596996 - BMASAVP1_1300 - alcohol dehydrogenase, zinc-containing 1276 72.59 0 1293259..1293393 + 44 121597401 - BMASAVP1_1301 - hypothetical protein 1277 63.36 0 1293390..1293842 + 150 121596625 - BMASAVP1_1302 - hypothetical protein 1278 66.86 0 1293900..1294409 - 169 121597173 - BMASAVP1_1303 - hypothetical protein 1279 74.60 +1 1294670..1294795 + 41 121597799 - BMASAVP1_1304 - hypothetical protein 1280 68.93 0 1295058..1296515 + 485 121597889 - BMASAVP1_1305 - putative methyl-accepting chemotaxis protein 1281 68.09 0 1296686..1296826 - 46 121597193 - BMASAVP1_1306 - hypothetical protein 1282 69.99 0 1296865..1298700 - 611 121597705 cckA BMASAVP1_1307 - sensory box histidine kinase/response regulator 1283 67.20 0 1298850..1299974 - 374 121597026 - BMASAVP1_1308 - ABC transporter, permease protein 1284 70.80 0 1299977..1303192 - 1071 121596695 - BMASAVP1_1309 - RND efflux system, cytoplasmic membrane extrusion protein 1285 68.72 0 1303189..1303674 - 161 121597704 - BMASAVP1_1310 - hypothetical protein 1286 72.79 0 1303671..1304258 - 195 121596475 - BMASAVP1_1311 - hypothetical protein 1287 71.84 0 1304255..1305781 - 508 121597458 - BMASAVP1_1312 - NodT family efflux transporter outer membrane lipoprotein 1288 76.50 +1 1305949..1306914 + 321 121596856 - BMASAVP1_1313 - TetR family transcriptional regulator 1289 60.61 -1 1306951..1307115 + 54 121597871 - BMASAVP1_1314 - hypothetical protein 1290 69.85 0 1307130..1307600 + 156 121596845 - BMASAVP1_1315 - universal stress protein 1291 69.10 0 1307597..1307884 + 95 121597671 - BMASAVP1_1316 - hypothetical protein 1292 64.47 0 1307881..1309017 + 378 121596523 - BMASAVP1_1317 - efflux ABC transporter, permease protein 1293 67.80 0 1309014..1309718 + 234 121597445 - BMASAVP1_1318 - efflux ABC transporter, ATP-binding protein 1294 70.99 0 1309715..1310800 + 361 121597176 - BMASAVP1_1319 - MFP family transporter 1295 73.76 +1 1310778..1313117 + 779 121598079 - BMASAVP1_1320 - ABC-type export system, outer membrane channel protein 1296 68.37 0 1314116..1315813 + 565 121598075 - BMASAVP1_1321 - methyl-accepting chemotaxis protein 1297 71.36 0 1315847..1316698 + 283 121597277 cysC-2 BMASAVP1_1322 - adenylylsulfate kinase 1298 67.69 0 1316879..1318150 + 423 121597644 - BMASAVP1_1323 - sulfotransferase domain-containing protein 1299 69.28 0 1318531..1319181 + 216 121597156 - BMASAVP1_1324 - OsmY domain-containing protein 1300 78.79 +2 1319650..1319781 - 43 121597064 - BMASAVP1_1325 - hypothetical protein 1301 69.15 0 1319783..1320064 - 93 121597349 - BMASAVP1_1326 - hypothetical protein 1302 71.04 0 1320499..1321458 - 319 121596879 - BMASAVP1_1327 - decarboxylase family protein 1303 65.33 0 1321762..1322061 + 99 121598068 - BMASAVP1_1328 - hypothetical protein 1304 69.00 0 1322447..1322875 - 142 121597358 - BMASAVP1_1329 - hypothetical protein 1305 76.70 +1 1322880..1323218 - 112 121597818 - BMASAVP1_1330 - hypothetical protein 1306 71.83 0 1323253..1323504 - 83 121597309 - BMASAVP1_1331 - AraC family transcriptional regulator 1307 68.86 0 1323634..1323861 + 75 121597506 - BMASAVP1_1332 - hypothetical protein 1308 71.63 0 1323861..1324847 + 328 121598107 - BMASAVP1_1333 - alcohol dehydrogenase, zinc-containing 1309 65.98 0 1325053..1325781 - 242 121597721 - BMASAVP1_1334 - Crp/FNR family transcriptional regulator 1310 66.67 0 1325879..1326193 + 104 121596688 - BMASAVP1_1335 - hypothetical protein 1311 68.42 0 1326292..1326405 - 37 121597243 - BMASAVP1_1336 - hypothetical protein 1312 65.46 0 1326500..1327246 + 248 121597774 phbB-1 BMASAVP1_1337 - acetoacetyl-CoA reductase 1313 66.06 0 1327437..1327766 - 109 121596484 - BMASAVP1_1338 - hypothetical protein 1314 68.57 0 1327840..1329258 - 472 121598051 - BMASAVP1_1339 - metallo-beta-lactamase family protein 1315 72.08 0 1329263..1329502 - 79 121596707 - BMASAVP1_1340 - hypothetical protein 1316 64.76 0 1329933..1330823 + 296 121597391 - BMASAVP1_1341 - hypothetical protein 1317 64.01 0 1330946..1332562 - 538 121596501 - BMASAVP1_1342 - ISBma2, transposase 1318 69.15 0 1332638..1332838 - 66 121597717 - BMASAVP1_1343 - hypothetical protein 1319 66.22 0 1333058..1334620 + 520 121596762 lysP BMASAVP1_1344 - lysine-specific permease 1320 61.63 -1 1334820..1335653 - 277 121597927 - BMASAVP1_1345 - IS407A, transposase OrfB 1321 56.82 -2 1335677..1335940 - 87 121596710 - BMASAVP1_1346 - IS407A, transposase OrfA 1322 58.70 -1 1337201..1337338 - 45 121596644 - BMASAVP1_1348 - hypothetical protein 1323 68.40 0 1337428..1338867 - 479 121597216 - BMASAVP1_1349 - BNR/Asp-box repeat-containing protein 1324 70.57 0 1338883..1339164 + 93 121597548 - BMASAVP1_1350 - hypothetical protein 1325 72.81 0 1339352..1339579 + 75 121597990 - BMASAVP1_1352 - hypothetical protein 1326 74.83 +1 1339539..1340591 - 350 121597028 - BMASAVP1_1351 - hypothetical protein 1327 69.81 0 1340614..1341186 - 190 121596553 - BMASAVP1_1353 - isochorismatase family protein 1328 73.05 0 1341183..1341668 - 161 121597430 - BMASAVP1_1354 - MarR family transcriptional regulator 1329 57.97 -2 1341870..1342007 - 45 121597561 - BMASAVP1_1355 - hypothetical protein 1330 74.05 +1 1342002..1342949 + 315 121596991 - BMASAVP1_1356 - carboxylesterase family protein 1331 72.33 0 1342993..1343787 - 264 121598166 benD BMASAVP1_1357 - 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase 1332 71.08 0 1343784..1344803 - 339 121597202 benC BMASAVP1_1358 - benzoate 1,2 dioxygenase, electron transfer component 1333 61.38 -1 1344847..1345338 - 163 121596624 benB BMASAVP1_1359 - benzoate 1,2-dioxygenase beta subunit 1334 66.89 0 1345335..1346702 - 455 121597417 benA BMASAVP1_1360 - benzoate 1,2-dioxygenase, alpha subunit 1335 66.12 0 1346920..1347840 + 306 121596488 benM BMASAVP1_1361 - ben operon transcriptional regulator BenM 1336 73.70 +1 1348018..1349055 - 345 121597743 - BMASAVP1_1362 - hypothetical protein 1337 72.33 0 1349111..1349569 + 152 121596457 - BMASAVP1_1363 - LysR family transcriptional regulator 1338 70.14 0 1349629..1349772 - 47 121597886 - BMASAVP1_1364 - hypothetical protein 1339 73.81 +1 1349765..1350058 + 97 121596757 - BMASAVP1_1366 - transcriptional regulator 1340 72.93 0 1350012..1351064 - 350 121597509 - BMASAVP1_1365 - AraC family transcriptional regulator 1341 68.68 0 1351214..1353247 + 677 121597310 - BMASAVP1_1367 - FAD/FMN-binding/pyridine nucleotide-disulphide domain-containing oxidoreductase 1342 76.10 +1 1353265..1353720 + 151 121596507 - BMASAVP1_1368 - hypothetical protein 1343 64.12 0 1353957..1354859 + 300 121597084 cyoA-2 BMASAVP1_1369 - ubiquinol oxidase, subunit II 1344 63.28 0 1354862..1356868 + 668 121597857 cyoB BMASAVP1_1370 - ubiquinol oxidase, subunit I 1345 67.16 0 1356868..1357476 + 202 121598058 cyoC BMASAVP1_1371 - ubiquinol oxidase, subunit III 1346 63.36 0 1357477..1357809 + 110 121597003 cyoD-2 BMASAVP1_1372 - ubiquinol oxidase, subunit IV 1347 64.26 0 1357929..1358219 - 96 121596520 catC BMASAVP1_1373 - muconolactone delta-isomerase 1348 68.11 0 1358257..1359159 - 300 121597522 catA BMASAVP1_1374 - catechol 1,2-dioxygenase 1349 71.60 0 1359194..1360327 - 377 121597617 catB BMASAVP1_1375 - muconate cycloisomerase 1350 71.85 0 1360417..1361304 + 295 121596852 catR BMASAVP1_1376 - cat operon transcriptional activator CatR 1351 71.83 0 1361354..1362379 - 341 121597164 - BMASAVP1_1377 - AraC family transcriptional regulator 1352 64.48 0 1362573..1363850 + 425 121598076 - BMASAVP1_1378 - aromatic-ring-hydroxylating dioxygenase, alpha subunit 1353 63.95 0 1363847..1364362 + 171 121597324 - BMASAVP1_1379 - aromatic-ring-hydroxylating dioxygenase, beta subunit 1354 67.88 0 1364384..1364713 + 109 121597450 - BMASAVP1_1380 - aromatic-ring-hydroxylating dioxygenase, ferredoxin subunit 68.39 MEAN 5.20 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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