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Burkholderia cepacia AMMD chromosome 3, complete sequence - 1..1281472 1013 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 853 55.60 -2 1057096..1057800 + 234 115361170 - Bamb_6429 - aspartate racemase 854 59.63 -1 1058833..1059159 + 108 115361171 - Bamb_6430 - hypothetical protein 855 62.63 0 1059503..1060246 - 247 115361172 - Bamb_6431 - short-chain dehydrogenase/reductase SDR 856 59.18 -1 1060269..1060562 - 97 115361173 - Bamb_6432 - hypothetical protein 857 60.40 -1 1060609..1061454 - 281 115361174 - Bamb_6433 - aminotransferase 858 59.32 -1 1061600..1062565 + 321 115361175 - Bamb_6434 - LysR family transcriptional regulator 859 62.33 0 1062824..1066330 - 1168 115361176 - Bamb_6435 - indolepyruvate ferredoxin oxidoreductase 860 57.20 -2 1066480..1066944 + 154 115361177 - Bamb_6436 - AsnC family transcriptional regulator 861 57.12 -2 1067193..1068449 - 418 115361178 - Bamb_6437 - hypothetical protein 862 57.26 -2 1068508..1069857 - 449 115361179 - Bamb_6438 - glutathione-disulfide reductase 863 57.97 -1 1069854..1070681 - 275 115361180 - Bamb_6439 - hypothetical protein 864 60.57 -1 1070818..1071735 - 305 115361181 - Bamb_6440 - cysteine synthase A 865 62.50 0 1071786..1072817 - 343 115361182 - Bamb_6441 - alcohol dehydrogenase 866 62.68 0 1072977..1073729 - 250 115361183 - Bamb_6442 - short-chain dehydrogenase/reductase SDR 867 62.43 0 1073770..1074996 - 408 115361184 - Bamb_6443 - OsmC family protein 868 65.72 0 1075007..1076170 - 387 115361185 - Bamb_6444 - amine oxidase 869 62.18 0 1076173..1076907 - 244 115361186 - Bamb_6445 - anti-ECFsigma factor, ChrR 870 61.74 -1 1076919..1077263 - 114 115361187 - Bamb_6446 - alkylhydroperoxidase 871 56.38 -2 1077324..1077605 - 93 115361188 - Bamb_6447 - hypothetical protein 872 62.27 0 1077670..1078443 - 257 115361189 - Bamb_6448 - short-chain dehydrogenase/reductase SDR 873 61.94 0 1078751..1079680 + 309 115361190 - Bamb_6449 - LysR family transcriptional regulator 874 59.22 -1 1079753..1080370 - 205 115361191 - Bamb_6450 - TetR family transcriptional regulator 875 56.31 -2 1080440..1081327 + 295 115361192 - Bamb_6451 - peptidase S15 876 54.35 -2 1081345..1082172 + 275 115361193 - Bamb_6452 - short-chain dehydrogenase/reductase SDR 877 50.64 -2 1082594..1083142 + 182 115361194 - Bamb_6453 - OsmC family protein 878 59.50 -1 1083230..1084108 + 292 115361195 - Bamb_6454 - PhzF family phenazine biosynthesis protein 879 64.97 0 1084358..1084888 + 176 115361196 - Bamb_6455 - GCN5-related N-acetyltransferase 880 67.64 0 1084916..1085836 - 306 115361197 - Bamb_6456 - LysR family transcriptional regulator 881 70.15 0 1085921..1087354 + 477 115361198 - Bamb_6457 - argininosuccinate lyase 882 68.23 0 1087348..1088241 + 297 115361199 - Bamb_6458 - polar amino acid ABC transporter, inner membrane subunit 883 69.01 0 1088274..1089041 + 255 115361200 - Bamb_6459 - ABC transporter related 884 66.81 0 1089257..1089970 + 237 115361201 - Bamb_6460 - extracellular solute-binding protein 885 70.56 +1 1089978..1090850 + 290 115361202 - Bamb_6461 - polysaccharide deacetylase 886 69.64 0 1090847..1091755 + 302 115361203 - Bamb_6462 - polysaccharide deacetylase 887 71.31 +1 1091752..1093128 + 458 115361204 - Bamb_6463 - MmgE/PrpD family protein 888 69.77 0 1093581..1097960 + 1459 115361205 - Bamb_6464 - outer membrane autotransporter 889 68.50 0 1098284..1100032 - 582 115361206 - Bamb_6465 - FAD linked oxidase domain-containing protein 890 67.84 0 1101578..1102432 + 284 115361207 - Bamb_6466 - LuxR family transcriptional regulator 891 72.67 +1 1102383..1102715 - 110 115361208 - Bamb_6467 - hypothetical protein 892 69.47 0 1102700..1103590 - 296 115361209 - Bamb_6468 - LuxR family transcriptional regulator 893 58.04 -1 1103736..1105439 - 567 115361210 - Bamb_6469 - cyclic peptide transporter 894 58.43 -1 1105456..1105989 - 177 115361211 - Bamb_6470 - hypothetical protein 895 61.19 -1 1105989..1106645 - 218 115361212 - Bamb_6471 - glycosyl transferase family protein 896 67.77 0 1106642..1116172 - 3176 115361213 - Bamb_6472 - amino acid adenylation domain-containing protein 897 68.51 0 1116260..1125316 - 3018 115361214 - Bamb_6473 - amino acid adenylation domain-containing protein 898 68.25 0 1125367..1129281 - 1304 115361215 - Bamb_6474 - amino acid adenylation domain-containing protein 899 62.77 0 1129269..1130885 - 538 115361216 - Bamb_6475 - beta-lactamase domain-containing protein 900 68.98 0 1130896..1144332 - 4478 115361217 - Bamb_6476 - amino acid adenylation domain-containing protein 901 68.68 0 1144329..1147652 - 1107 115361218 - Bamb_6477 - short-chain dehydrogenase/reductase SDR 902 67.12 0 1147649..1152073 - 1474 115361219 - Bamb_6478 - beta-ketoacyl synthase 903 62.26 0 1152264..1153262 - 332 115361220 - Bamb_6479 - taurine catabolism dioxygenase TauD/TfdA 904 62.07 0 1153341..1154711 - 456 115361221 - Bamb_6480 - 2,4-diaminobutyrate 4-transaminase 905 62.39 0 1154845..1155873 - 342 115361222 - Bamb_6481 - NAD-dependent epimerase/dehydratase 906 65.13 0 1155951..1156796 - 281 115361223 - Bamb_6482 - oleoyl-(acyl-carrier-protein) hydrolase 907 65.89 0 1157846..1159126 + 426 115361224 - Bamb_6483 - polysaccharide export protein 908 62.73 0 1159533..1160750 + 405 115361225 - Bamb_6484 - ATP-grasp enzyme-like protein 909 62.96 0 1160737..1162005 + 422 115361226 - Bamb_6485 - putative oxidoreductase 910 61.36 -1 1162103..1162969 + 288 115361227 - Bamb_6486 - polysaccharide deacetylase 911 64.83 0 1163141..1165486 + 781 115361228 - Bamb_6487 - hypothetical protein 912 62.53 0 1165552..1166880 + 442 115361229 - Bamb_6488 - O-antigen polymerase 913 64.92 0 1166792..1168225 - 477 115361230 - Bamb_6489 - hypothetical protein 914 63.37 0 1168209..1169453 - 414 115361231 - Bamb_6490 - glycosyl transferase, group 1 915 63.90 0 1170120..1171202 + 360 115361232 - Bamb_6491 - undecaprenyl-phosphate galactose phosphotransferase 916 63.11 0 1171267..1172475 + 402 115361233 - Bamb_6492 - glycosyl transferase, group 1 917 64.28 0 1172477..1173856 + 459 115361234 - Bamb_6493 - virulence factor MVIN family protein 918 66.73 0 1174083..1175627 + 514 115361235 - Bamb_6494 - mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 919 63.93 0 1175801..1176604 - 267 115361236 - Bamb_6495 - Crp/FNR family transcriptional regulator 920 56.58 -2 1176687..1177172 + 161 115361237 - Bamb_6496 - hypothetical protein 921 67.86 0 1177737..1177988 + 83 115361238 - Bamb_6497 - hypothetical protein 922 58.06 -1 1178064..1179236 - 390 115361239 - Bamb_6498 - porin 923 59.85 -1 1179311..1180660 - 449 115361240 - Bamb_6499 - major facilitator transporter 924 63.62 0 1181416..1182300 + 294 115361241 - Bamb_6500 - AraC family transcriptional regulator 925 63.09 0 1182621..1185335 + 904 115361242 - Bamb_6501 - 2-oxoacid dehydrogenase subunit E1 926 63.13 0 1185450..1186835 + 461 115361243 - Bamb_6502 - pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase 927 64.98 0 1187117..1188895 + 592 115361244 - Bamb_6503 - dihydrolipoamide dehydrogenase 928 58.63 -1 1189143..1189652 + 169 115361245 - Bamb_6504 - AsnC family transcriptional regulator 929 62.49 0 1189675..1190823 + 382 115361246 - Bamb_6505 - 3,4-dihydroxy-2-butanone 4-phosphate synthase 930 60.68 -1 1191024..1192661 + 545 115361247 - Bamb_6506 - AMP-dependent synthetase and ligase 931 61.07 -1 1192699..1193520 - 273 115361248 - Bamb_6507 - AraC family transcriptional regulator 932 60.20 -1 1193715..1194503 + 262 115361249 - Bamb_6508 - enoyl-CoA hydratase/isomerase 933 61.67 -1 1194506..1195285 + 259 115361250 - Bamb_6509 - creatininase 934 60.35 -1 1195576..1196730 + 384 115361251 - Bamb_6510 - luciferase family protein 935 60.58 -1 1196739..1197527 + 262 115361252 - Bamb_6511 - enoyl-CoA hydratase/isomerase 936 60.95 -1 1197524..1199431 + 635 115361253 - Bamb_6512 - AMP-dependent synthetase and ligase 937 62.72 0 1199597..1200103 + 168 115361254 - Bamb_6513 - flavin reductase domain-containing protein 938 63.43 0 1201727..1202932 + 401 115361255 - Bamb_6514 - alanine racemase 939 60.57 -1 1203031..1203309 + 92 115361256 - Bamb_6515 - major facilitator family transporter 940 62.44 0 1203408..1204898 + 496 115361257 - Bamb_6516 - integrase catalytic subunit 941 64.84 0 1205128..1205730 + 200 115361258 - Bamb_6517 - transposase and inactivated derivatives 942 52.56 -2 1205821..1206465 - 214 115361259 - Bamb_6518 - hypothetical protein 943 62.94 0 1206692..1207924 + 410 115361260 - Bamb_6519 - hypothetical protein 944 61.43 -1 1207925..1208497 - 190 115361261 - Bamb_6520 - hypothetical protein 945 58.47 -1 1208519..1208896 - 125 115361262 - Bamb_6521 - hypothetical protein 946 58.24 -1 1209274..1209546 + 90 115361263 - Bamb_6522 - transposase and inactivated derivatives 947 61.26 -1 1209717..1210640 + 307 115361264 - Bamb_6523 - LysR family transcriptional regulator 948 63.26 0 1210758..1212020 - 420 115361265 - Bamb_6524 - major facilitator transporter 949 52.18 -2 1212343..1212777 + 144 115361266 - Bamb_6525 - hypothetical protein 950 68.02 0 1213031..1214437 + 468 115361267 - Bamb_6526 - beta-lactamase domain-containing protein 951 65.26 0 1214501..1215421 - 306 115361268 - Bamb_6527 - LysR family transcriptional regulator 952 69.09 0 1215517..1216467 + 316 115361269 - Bamb_6528 - 2-dehydropantoate 2-reductase 66.16 MEAN 4.31 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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