version 1.0
Burkholderia cepacia AMMD chromosome 3, complete sequence - 1..1281472 1013 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 725 68.72 0 896820..899549 + 909 115361042 - Bamb_6301 - aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding 726 66.67 0 899546..900064 + 172 115361043 - Bamb_6302 - 2Fe-2S iron-sulfur cluster binding domain-containing protein 727 67.37 0 900061..901062 + 333 115361044 - Bamb_6303 - hypothetical protein 728 67.14 0 901091..902353 - 420 115361045 - Bamb_6304 - Serine-type D-Ala-D-Ala carboxypeptidase 729 66.35 0 902498..903457 - 319 115361046 - Bamb_6305 - protein involved in MetA-pathway of phenol degradation-like protein 730 66.86 0 903491..904018 - 175 115361047 - Bamb_6306 - flavin reductase domain-containing protein 731 67.55 0 904024..905262 - 412 115361048 - Bamb_6307 - hypothetical protein 732 69.20 0 905326..906114 - 262 115361049 - Bamb_6308 - short chain dehydrogenase 733 68.62 0 906194..907423 - 409 115361050 - Bamb_6309 - carboxymethylenebutenolidase 734 67.45 0 907776..908801 + 341 115361051 - Bamb_6310 - AraC family transcriptional regulator 735 66.04 0 909014..910123 - 369 115361052 - Bamb_6311 - alcohol dehydrogenase 736 66.30 0 910180..910455 - 91 115361053 - Bamb_6312 - regulator protein FrmR 737 63.82 0 910808..912001 + 397 115361054 - Bamb_6313 - major facilitator transporter 738 63.32 0 912054..913187 + 377 115361055 - Bamb_6314 - porin 739 68.81 0 913395..914843 - 482 115361056 - Bamb_6315 - amidase 740 65.92 0 915416..916897 + 493 115361057 - Bamb_6316 - GntR family transcriptional regulator 741 59.62 -1 917089..917556 + 155 115361058 - Bamb_6317 - antibiotic biosynthesis monooxygenase 742 69.16 0 917660..918622 - 320 115361059 - Bamb_6318 - LysR family transcriptional regulator 743 69.79 0 918825..919946 + 373 115361060 - Bamb_6319 - amidohydrolase 744 66.67 0 920000..920794 + 264 115361061 - Bamb_6320 - extracellular solute-binding protein 745 65.99 0 920850..922034 + 394 115361062 - Bamb_6321 - porin 746 69.53 0 924056..925069 - 337 115361063 - Bamb_6322 - LacI family transcription regulator 747 69.18 0 925303..926457 + 384 115361064 - Bamb_6323 - ABC transporter related 748 65.62 0 926521..927759 + 412 115361065 - Bamb_6324 - extracellular solute-binding protein 749 65.47 0 927833..928750 + 305 115361066 - Bamb_6325 - binding-protein-dependent transport systems inner membrane component 750 67.25 0 928762..929613 + 283 115361067 - Bamb_6326 - binding-protein-dependent transport systems inner membrane component 751 69.96 0 929652..931622 + 656 115361068 - Bamb_6327 - Beta-galactosidase 752 71.68 +1 931627..932922 + 431 115361069 - Bamb_6328 - major facilitator transporter 753 67.70 0 932981..934141 - 386 115361070 - Bamb_6329 - arabinogalactan endo-1,4-beta-galactosidase 754 69.33 0 934309..935397 - 362 115361071 - Bamb_6330 - aldose 1-epimerase 755 68.51 0 935425..936618 - 397 115361072 - Bamb_6331 - AraC family transcriptional regulator 756 66.82 0 936884..938206 + 440 115361073 - Bamb_6332 - xylose isomerase 757 72.28 +1 938211..939689 + 492 115361074 - Bamb_6333 - xylulokinase 758 65.69 0 939789..940817 + 342 115361075 - Bamb_6334 - D-xylose ABC transporter, periplasmic substrate-binding protein 759 68.85 0 940889..942448 + 519 115361076 - Bamb_6335 - xylose transporter ATP-binding subunit 760 69.42 0 942445..943644 + 399 115361077 - Bamb_6336 - inner-membrane translocator 761 69.88 0 943663..944595 - 310 115361078 - Bamb_6337 - LysR family transcriptional regulator 762 67.24 0 944665..945540 + 291 115361079 - Bamb_6338 - putative oxidoreductase 763 62.91 0 945608..946006 - 132 115361080 - Bamb_6339 - cupin 2 domain-containing protein 764 65.05 0 946138..947001 - 287 115361081 - Bamb_6340 - NmrA family protein 765 69.67 0 947112..948011 + 299 115361082 - Bamb_6341 - LysR family transcriptional regulator 766 59.77 -1 948067..948240 - 57 115361083 - Bamb_6342 - hypothetical protein 767 64.39 0 948237..949247 - 336 115361084 - Bamb_6343 - hypothetical protein 768 69.88 0 949369..951327 - 652 115361085 - Bamb_6344 - beta strand repeat-containing protein 769 68.70 0 951565..953085 - 506 115361086 - Bamb_6345 - diguanylate cyclase 770 70.60 +1 953298..954770 - 490 115361087 - Bamb_6346 - succinate-semialdehyde dehydrogenase (NAD(P)(+)) 771 61.99 0 954882..955373 - 163 115361088 - Bamb_6347 - AsnC family transcriptional regulator 772 70.09 0 955460..956860 - 466 115361089 - Bamb_6348 - hypothetical protein 773 72.06 +1 957022..957948 - 308 115361090 - Bamb_6349 - D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 774 72.24 +1 957961..958821 - 286 115361091 - Bamb_6350 - GCN5-related N-acetyltransferase 775 63.83 0 959301..959969 + 222 115361092 - Bamb_6351 - haloacid dehalogenase, type II 776 68.55 0 960142..961680 + 512 115361093 - Bamb_6352 - methyl-accepting chemotaxis sensory transducer 777 70.63 +1 961713..962141 - 142 115361094 - Bamb_6353 - hypothetical protein 778 66.04 0 962356..963939 + 527 115361095 - Bamb_6354 - extracellular solute-binding protein 779 67.09 0 964019..964972 + 317 115361096 - Bamb_6355 - binding-protein-dependent transport systems inner membrane component 780 70.52 +1 965078..965959 + 293 115361097 - Bamb_6356 - binding-protein-dependent transport systems inner membrane component 781 70.03 0 965959..967833 + 624 115361098 - Bamb_6357 - ABC transporter related 782 68.31 0 967974..969308 + 444 115361099 - Bamb_6358 - FAD dependent oxidoreductase 783 70.18 0 969395..969850 + 151 115361100 - Bamb_6359 - AraC family transcriptional regulator 784 67.89 0 969972..970706 + 244 115361101 - Bamb_6360 - protein of unknown function DUF861, cupin_3 785 69.68 0 970709..972034 + 441 115361102 - Bamb_6361 - FAD dependent oxidoreductase 786 67.65 0 972124..973449 + 441 115361103 - Bamb_6362 - FAD dependent oxidoreductase 787 69.25 0 973446..974915 + 489 115361104 - Bamb_6363 - betaine-aldehyde dehydrogenase 788 66.16 0 974947..976134 + 395 115361105 - Bamb_6364 - amidohydrolase 789 64.78 0 976304..977206 + 300 115361106 - Bamb_6365 - GCN5-related N-acetyltransferase 790 66.89 0 977238..979457 - 739 115361107 - Bamb_6366 - putative transmembrane protein 791 67.81 0 980170..982359 + 729 115361108 - Bamb_6367 - TonB-dependent siderophore receptor 792 65.93 0 982384..983199 - 271 115361109 - Bamb_6368 - two component AraC family transcriptional regulator 793 67.61 0 984107..987721 + 1204 115361110 - Bamb_6369 - YadA domain-containing protein 794 67.83 0 987837..989207 - 456 115361111 - Bamb_6370 - TolC family type I secretion outer membrane protein 795 61.90 0 989388..1000598 - 3736 115361112 - Bamb_6371 - hypothetical protein 796 67.02 0 1000688..1002112 - 474 115361113 - Bamb_6372 - HlyD family type I secretion membrane fusion protein 797 69.49 0 1002096..1004291 - 731 115361114 - Bamb_6373 - ABC transporter related 798 70.69 +1 1004887..1006128 - 413 115361115 - Bamb_6374 - citrate synthase 799 69.47 0 1006189..1006581 - 130 115361116 - Bamb_6375 - glyoxalase/bleomycin resistance protein/dioxygenase 800 66.20 0 1006642..1007928 - 428 115361117 - Bamb_6376 - major facilitator transporter 801 68.77 0 1008025..1008783 - 252 115361118 - Bamb_6377 - short-chain dehydrogenase/reductase SDR 802 68.33 0 1009098..1010060 + 320 115361119 - Bamb_6378 - D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 803 66.96 0 1010244..1010588 - 114 115361120 - Bamb_6379 - hypothetical protein 804 63.22 0 1010683..1012803 + 706 115361121 - Bamb_6380 - putative outer membrane protein 805 69.34 0 1012838..1014070 + 410 115361122 - Bamb_6381 - hypothetical protein 806 62.67 0 1014606..1014905 + 99 115361123 - Bamb_6382 - histone family protein nucleoid-structuring protein H-NS 807 60.73 -1 1014919..1015137 + 72 115361124 - Bamb_6383 - hypothetical protein 808 62.28 0 1015426..1015881 - 151 115361125 - Bamb_6384 - alkylhydroperoxidase 809 64.75 0 1015907..1016323 - 138 115361126 - Bamb_6385 - cupin 2 domain-containing protein 810 68.72 0 1016443..1017855 - 470 115361127 - Bamb_6386 - GntR family transcriptional regulator 811 61.49 -1 1018003..1018659 + 218 115361128 - Bamb_6387 - metal-dependent phosphohydrolase 812 63.49 0 1018973..1019413 + 146 115361129 - Bamb_6388 - heat shock protein Hsp20 813 64.95 0 1019429..1019836 + 135 115361130 - Bamb_6389 - heat shock protein Hsp20 814 63.48 0 1019932..1020495 + 187 115361131 - Bamb_6390 - heat shock protein Hsp20 815 59.61 -1 1020532..1020786 - 84 115361132 - Bamb_6391 - hypothetical protein 816 64.94 0 1020892..1022514 - 540 115361133 groEL Bamb_6392 - chaperonin GroEL 817 64.15 0 1022592..1022909 - 105 115361134 - Bamb_6393 - chaperonin Cpn10 818 68.70 0 1023081..1023719 - 212 115361135 - Bamb_6394 - hypothetical protein 819 63.71 0 1024343..1024579 + 78 115361136 - Bamb_6395 - hypothetical protein 820 63.94 0 1024596..1025072 - 158 115361137 - Bamb_6396 - hypothetical protein 821 57.92 -1 1025182..1025421 + 79 115361138 - Bamb_6397 - hypothetical protein 822 60.19 -1 1025598..1025813 + 71 115361139 - Bamb_6398 - hypothetical protein 823 58.65 -1 1025863..1026174 - 103 115361140 - Bamb_6399 - hypothetical protein 824 52.74 -2 1026244..1026480 - 78 115361141 - Bamb_6400 - hypothetical protein 66.16 MEAN 4.31 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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