version 1.0
Burkholderia cepacia AMMD chromosome 3, complete sequence - 1..1281472 1013 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 25 65.01 0 35405..36127 - 240 115360342 - Bamb_5598 - NADPH-dependent FMN reductase 26 66.12 0 36148..37254 - 368 115360343 - Bamb_5599 - bile acid:sodium symporter 27 67.88 0 37285..37779 - 164 115360344 - Bamb_5600 - protein tyrosine phosphatase 28 67.86 0 37802..38137 - 111 115360345 - Bamb_5601 - ArsR family transcriptional regulator 29 66.83 0 38631..39878 + 415 115360346 - Bamb_5602 - phosphatidylserine decarboxylase-related 30 65.24 0 39940..40149 - 69 115360347 - Bamb_5603 - hypothetical protein 31 69.30 0 40420..40761 - 113 115360348 - Bamb_5604 - hypothetical protein 32 68.67 0 40765..41313 - 182 115360349 - Bamb_5605 - PfpI family intracellular peptidase 33 66.39 0 41555..41920 - 121 115360350 - Bamb_5606 - hypothetical protein 34 75.37 +2 42012..42551 - 179 115360351 - Bamb_5607 - hypothetical protein 35 66.39 0 42576..42932 + 118 115360352 - Bamb_5608 - hypothetical protein 36 70.36 0 42975..44300 + 441 115360353 - Bamb_5609 - sodium/hydrogen exchanger 37 70.28 0 44306..47104 - 932 115360354 - Bamb_5610 - ATP dependent DNA ligase 38 67.16 0 47129..48136 - 335 115360355 - Bamb_5611 - Ku domain-containing protein 39 68.37 0 48194..50302 - 702 115360356 katE Bamb_5612 - hydroperoxidase II 40 68.99 0 50463..50849 - 128 115360357 - Bamb_5613 - hypothetical protein 41 58.64 -1 50846..51007 - 53 115360358 - Bamb_5614 - hypothetical protein 42 62.84 0 51062..51244 - 60 115360359 - Bamb_5615 - hypothetical protein 43 68.40 0 51314..52753 - 479 115360360 - Bamb_5616 - RNA polymerase factor sigma-54 44 74.76 +1 53175..53483 - 102 115360361 - Bamb_5617 - hypothetical protein 45 68.59 0 53533..53844 - 103 115360362 - Bamb_5618 - hypothetical protein 46 66.34 0 54567..54872 - 101 115360363 - Bamb_5619 - hypothetical protein 47 68.25 0 55018..55269 + 83 115360364 - Bamb_5620 - hypothetical protein 48 65.05 0 55364..55795 + 143 115360365 - Bamb_5621 - CBS domain-containing protein 49 66.25 0 55886..56368 + 160 115360366 - Bamb_5622 - PRC-barrel domain-containing protein 50 67.05 0 56623..57918 + 431 115360367 - Bamb_5623 - major facilitator superfamily metabolite/H(+) symporter 51 65.48 0 57925..58764 + 279 115360368 - Bamb_5624 - extracellular solute-binding protein 52 68.78 0 58790..60112 - 440 115360369 - Bamb_5625 - sodium:dicarboxylate symporter 53 68.24 0 60165..61115 - 316 115360370 - Bamb_5626 - LysR family transcriptional regulator 54 67.23 0 61170..62063 - 297 115360371 - Bamb_5627 - LysR family transcriptional regulator 55 68.56 0 62286..62549 + 87 115360372 - Bamb_5628 - hypothetical protein 56 73.00 +1 62597..63811 + 404 115360373 - Bamb_5629 - major facilitator transporter 57 70.23 0 63897..64373 - 158 115360374 - Bamb_5630 - response regulator receiver protein 58 74.62 +1 64607..65260 + 217 115360375 - Bamb_5631 - phage SPO1 DNA polymerase-related protein 59 68.16 0 65668..66807 + 379 115360376 - Bamb_5632 - natural resistance-associated macrophage protein 60 65.03 0 66958..67569 - 203 115360377 - Bamb_5633 - hypothetical protein 61 70.42 0 67629..68240 - 203 115360378 - Bamb_5634 - hypothetical protein 62 67.95 0 68269..69126 - 285 115360379 - Bamb_5635 - short-chain dehydrogenase/reductase SDR 63 72.95 +1 69257..69829 - 190 115360380 - Bamb_5636 - hypothetical protein 64 66.33 0 69918..70217 - 99 115360381 - Bamb_5637 - hypothetical protein 65 69.87 0 70257..71285 - 342 115360382 - Bamb_5638 - short chain dehydrogenase 66 68.40 0 71313..71717 - 134 115360383 - Bamb_5639 - transport-associated 67 71.22 +1 71960..73276 + 438 115360384 - Bamb_5640 - glycosyl transferase, group 1 68 67.52 0 73273..74322 + 349 115360385 - Bamb_5641 - NAD-dependent epimerase/dehydratase 69 71.48 +1 74350..76656 - 768 115360386 - Bamb_5642 - multi-sensor hybrid histidine kinase 70 70.62 +1 76797..77504 + 235 115360387 - Bamb_5643 - hypothetical protein 71 73.16 +1 77483..78406 + 307 115360388 - Bamb_5644 - glycosyl transferase family protein 72 67.03 0 78424..79791 - 455 115360389 - Bamb_5645 - two component, sigma54 specific, Fis family transcriptional regulator 73 66.95 0 80141..81211 + 356 115360390 - Bamb_5646 - sigma-54 dependent trancsriptional regulator 74 66.67 0 81261..82211 - 316 115360391 - Bamb_5647 - glycosyl transferase, group 1 75 71.03 +1 82201..83277 - 358 115360392 - Bamb_5648 - glycosyl transferase family protein 76 72.06 +1 83274..84275 - 333 115360393 - Bamb_5649 - glycosyl transferase family protein 77 69.42 0 84272..86017 - 581 115360394 - Bamb_5650 - carbamoyltransferase 78 73.48 +1 86021..87223 - 400 115360395 - Bamb_5651 - glycosyl transferase family protein 79 71.24 +1 87220..87831 - 203 115360396 - Bamb_5652 - histidinol-phosphate phosphatase family protein 80 70.24 0 87822..88577 - 251 115360397 - Bamb_5653 - short-chain dehydrogenase/reductase SDR 81 70.29 0 88759..89172 - 137 115360398 - Bamb_5654 - hypothetical protein 82 70.51 +1 89228..92035 - 935 115360399 - Bamb_5655 - response regulator receiver protein 83 71.86 +1 92083..92949 - 288 115360400 - Bamb_5656 - transport-associated 84 72.95 +1 93224..93589 - 121 115360401 - Bamb_5657 - hypothetical protein 85 69.06 0 93883..95469 + 528 115360402 - Bamb_5658 - PAS/PAC sensor hybrid histidine kinase 86 69.07 0 95545..95877 - 110 115360403 - Bamb_5659 - hypothetical protein 87 70.15 0 95906..97111 - 401 115360404 - Bamb_5660 - alcohol dehydrogenase 88 71.93 +1 97297..98835 - 512 115360405 - Bamb_5661 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase 89 64.00 0 99129..100553 - 474 115360406 - Bamb_5662 - GntR family transcriptional regulator 90 68.42 0 101139..101594 - 151 115360407 - Bamb_5663 - membrane protein 91 66.89 0 101758..102210 - 150 115360408 - Bamb_5664 - phosphate-starvation-inducible E 92 68.25 0 102731..103801 + 356 115360409 - Bamb_5665 - Dyp-type peroxidase family protein 93 71.08 +1 103794..104609 + 271 115360410 - Bamb_5666 - Linocin_M18 bacteriocin protein 94 61.48 -1 104710..104979 + 89 115360411 - Bamb_5667 - hypothetical protein 95 66.60 0 105470..108331 + 953 115360412 - Bamb_5668 - ATPase 96 67.32 0 108429..110708 + 759 115360413 - Bamb_5669 - oxidoreductase alpha (molybdopterin) subunit 97 66.67 0 110845..112266 - 473 115360414 - Bamb_5670 - permease for cytosine/purines, uracil, thiamine, allantoin 98 65.70 0 112614..113543 + 309 115360415 - Bamb_5671 - LysR family transcriptional regulator 99 68.38 0 113602..114765 - 387 115360416 - Bamb_5672 - acetylornithine deacetylase 100 72.57 +1 114758..115435 - 225 115360417 - Bamb_5673 - hypothetical protein 101 63.01 0 115444..115881 - 145 115360418 - Bamb_5674 - endoribonuclease L-PSP 102 69.14 0 116001..117413 - 470 115360419 - Bamb_5675 - flavin-containing monooxygenase FMO 103 58.65 -1 117576..117974 - 132 115360420 - Bamb_5676 - hypothetical protein 104 59.76 -1 117971..118216 - 81 115360421 - Bamb_5677 - AbrB family transcriptional regulator 105 61.48 -1 118367..119485 - 372 115360422 - Bamb_5678 - Sel1 domain-containing protein 106 61.54 -1 119939..120094 + 51 115360423 - Bamb_5679 - hypothetical protein 107 67.85 0 120304..121317 + 337 115360424 - Bamb_5680 - tryptophanyl-tRNA synthetase II 108 52.04 -2 121631..122095 + 154 115360425 - Bamb_5681 - hypothetical protein 109 58.12 -1 122095..122445 + 116 115360426 - Bamb_5682 - hypothetical protein 110 63.95 0 122503..123423 - 306 115360427 - Bamb_5683 - hypothetical protein 111 66.07 0 123524..124531 - 335 115360428 - Bamb_5684 - cytochrome d ubiquinol oxidase, subunit II 112 63.81 0 124535..125935 - 466 115360429 - Bamb_5685 - cytochrome bd ubiquinol oxidase, subunit I 113 72.39 +1 126354..127226 + 290 115360430 - Bamb_5686 - formate dehydrogenase family accessory protein FdhD 114 74.49 +1 127223..128437 + 404 115360431 - Bamb_5687 - molybdenum cofactor synthesis domain-containing protein 115 70.69 +1 128634..129752 + 372 115360432 - Bamb_5688 - molybdenum cofactor biosynthesis protein A 116 66.49 0 129800..130363 + 187 115360433 - Bamb_5689 - molybdopterin biosynthesis MoaE 117 63.95 0 130434..130691 + 85 115360434 - Bamb_5690 - thiamineS protein 118 63.20 0 130756..131418 - 220 115360435 - Bamb_5691 - glutathione S-transferase domain-containing protein 119 66.09 0 132016..134601 + 861 115360436 - Bamb_5692 - bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase 120 67.21 0 134727..135650 - 307 115360437 - Bamb_5693 - LysR family transcriptional regulator 121 64.89 0 135718..136335 + 205 115360438 - Bamb_5694 - lysine exporter protein LysE/YggA 122 63.91 0 136487..137611 + 374 115360439 - Bamb_5695 - transaminase 123 64.29 0 137649..139076 - 475 115360440 - Bamb_5696 - GntR family transcriptional regulator 124 71.81 +1 139394..141802 + 802 115360441 - Bamb_5697 - hypothetical protein 66.16 MEAN 4.31 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.