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Burkholderia cepacia AMMD chromosome 3, complete sequence - 1..1281472 1013 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 673 66.24 0 840411..841352 - 313 115360990 - Bamb_6249 - extracellular solute-binding protein 674 63.99 0 841367..842674 - 435 115360991 - Bamb_6250 - sodium:dicarboxylate symporter 675 64.74 0 842988..843971 - 327 115360992 - Bamb_6251 - LysR family transcriptional regulator 676 64.71 0 844081..845409 + 442 115360993 - Bamb_6252 - sodium:dicarboxylate symporter 677 64.93 0 845418..846740 + 440 115360994 - Bamb_6253 - aminotransferase, class V 678 56.11 -2 846901..847203 + 100 115360995 - Bamb_6254 - electron transfer flavoprotein alpha subunit-like protein 679 65.98 0 847193..848068 + 291 115360996 - Bamb_6255 - HpcH/HpaI aldolase 680 65.68 0 848136..849050 - 304 115360997 - Bamb_6256 - LysR family transcriptional regulator 681 64.96 0 849165..849575 + 136 115360998 - Bamb_6257 - endoribonuclease L-PSP 682 64.45 0 849635..850582 + 315 115360999 - Bamb_6258 - AraC family transcriptional regulator 683 62.32 0 850649..851131 - 160 115361000 - Bamb_6259 - hypothetical protein 684 64.44 0 851253..852107 - 284 115361001 - Bamb_6260 - ThiJ/PfpI domain-containing protein 685 61.71 -1 852210..852956 - 248 115361002 - Bamb_6261 - short-chain dehydrogenase/reductase SDR 686 57.73 -1 853348..854388 + 346 115361003 - Bamb_6262 - lipase, class 3 687 66.29 0 854806..855861 + 351 115361004 - Bamb_6263 - aldo/keto reductase 688 65.36 0 855915..857450 + 511 115361005 - Bamb_6264 - DEAD/DEAH box helicase domain-containing protein 689 57.01 -2 857919..858353 - 144 115361006 - Bamb_6265 - hypothetical protein 690 55.97 -2 858502..858744 + 80 115361007 - Bamb_6266 - hypothetical protein 691 60.60 -1 859499..860470 - 323 115361008 - Bamb_6267 - putative signal peptide protein 692 65.59 0 860671..862059 - 462 115361009 - Bamb_6268 - major facilitator transporter 693 68.02 0 862160..863338 - 392 115361010 - Bamb_6269 - L-carnitine dehydratase/bile acid-inducible protein F 694 65.28 0 863353..864510 - 385 115361011 - Bamb_6270 - acyl-CoA dehydrogenase domain-containing protein 695 69.70 0 864541..865398 - 285 115361012 - Bamb_6271 - hypothetical protein 696 68.77 0 865526..866476 + 316 115361013 - Bamb_6272 - LysR family transcriptional regulator 697 67.76 0 866561..867295 - 244 115361014 - Bamb_6273 - extracellular solute-binding protein 698 64.72 0 867390..867749 - 119 115361015 - Bamb_6274 - antibiotic biosynthesis monooxygenase 699 63.47 0 868016..868453 + 145 115361016 - Bamb_6275 - hypothetical protein 700 67.52 0 868559..869968 + 469 115361017 - Bamb_6276 - response regulator receiver modulated metal dependent phosphohydrolase 701 68.12 0 870047..871831 + 594 115361018 - Bamb_6277 - periplasmic sensor signal transduction histidine kinase 702 70.29 0 871856..872932 - 358 115361019 - Bamb_6278 - poly(3-hydroxybutyrate) depolymerase-like protein 703 68.43 0 873273..874181 - 302 115361020 - Bamb_6279 - LysR family transcriptional regulator 704 69.96 0 874463..875404 + 313 115361021 - Bamb_6280 - pyruvate carboxyltransferase 705 66.49 0 875412..876563 + 383 115361022 - Bamb_6281 - L-carnitine dehydratase/bile acid-inducible protein F 706 64.79 0 876723..878162 + 479 115361023 - Bamb_6282 - major facilitator transporter 707 65.89 0 878205..878588 - 127 115361024 - Bamb_6283 - GtrA family protein 708 66.28 0 878604..879647 - 347 115361025 - Bamb_6284 - glycosyl transferase family protein 709 68.33 0 879671..881050 - 459 115361026 - Bamb_6285 - hypothetical protein 710 63.97 0 881047..882456 - 469 115361027 - Bamb_6286 - hypothetical protein 711 55.74 -2 883320..883502 + 60 115361028 - Bamb_6287 - Flp/Fap pilin component 712 60.87 -1 883671..883877 + 68 115361029 - Bamb_6288 - Flp/Fap pilin component 713 67.59 0 883909..884451 + 180 115361030 - Bamb_6289 - peptidase A24A, prepilin type IV 714 69.38 0 884484..885884 + 466 115361031 - Bamb_6290 - AAA ATPase 715 68.20 0 885920..886765 + 281 115361032 - Bamb_6291 - Flp pilus assembly CpaB 716 70.97 +1 886879..888852 + 657 115361033 - Bamb_6292 - type II and III secretion system protein 717 67.68 0 888873..889169 + 98 115361034 - Bamb_6293 - hypothetical protein 718 67.06 0 889195..890466 + 423 115361035 - Bamb_6294 - hypothetical protein 719 65.54 0 890480..891013 + 177 115361036 - Bamb_6295 - TadE family protein 720 62.84 0 891010..891453 + 147 115361037 - Bamb_6296 - TadE family protein 721 68.98 0 891474..892682 + 402 115361038 - Bamb_6297 - response regulator receiver protein 722 65.72 0 892702..894069 + 455 115361039 - Bamb_6298 - type II secretion system protein E 723 65.44 0 894103..895080 + 325 115361040 - Bamb_6299 - type II secretion system protein 724 65.74 0 895119..896090 + 323 115361041 - Bamb_6300 - type II secretion system protein 725 68.72 0 896820..899549 + 909 115361042 - Bamb_6301 - aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding 726 66.67 0 899546..900064 + 172 115361043 - Bamb_6302 - 2Fe-2S iron-sulfur cluster binding domain-containing protein 727 67.37 0 900061..901062 + 333 115361044 - Bamb_6303 - hypothetical protein 728 67.14 0 901091..902353 - 420 115361045 - Bamb_6304 - Serine-type D-Ala-D-Ala carboxypeptidase 729 66.35 0 902498..903457 - 319 115361046 - Bamb_6305 - protein involved in MetA-pathway of phenol degradation-like protein 730 66.86 0 903491..904018 - 175 115361047 - Bamb_6306 - flavin reductase domain-containing protein 731 67.55 0 904024..905262 - 412 115361048 - Bamb_6307 - hypothetical protein 732 69.20 0 905326..906114 - 262 115361049 - Bamb_6308 - short chain dehydrogenase 733 68.62 0 906194..907423 - 409 115361050 - Bamb_6309 - carboxymethylenebutenolidase 734 67.45 0 907776..908801 + 341 115361051 - Bamb_6310 - AraC family transcriptional regulator 735 66.04 0 909014..910123 - 369 115361052 - Bamb_6311 - alcohol dehydrogenase 736 66.30 0 910180..910455 - 91 115361053 - Bamb_6312 - regulator protein FrmR 737 63.82 0 910808..912001 + 397 115361054 - Bamb_6313 - major facilitator transporter 738 63.32 0 912054..913187 + 377 115361055 - Bamb_6314 - porin 739 68.81 0 913395..914843 - 482 115361056 - Bamb_6315 - amidase 740 65.92 0 915416..916897 + 493 115361057 - Bamb_6316 - GntR family transcriptional regulator 741 59.62 -1 917089..917556 + 155 115361058 - Bamb_6317 - antibiotic biosynthesis monooxygenase 742 69.16 0 917660..918622 - 320 115361059 - Bamb_6318 - LysR family transcriptional regulator 743 69.79 0 918825..919946 + 373 115361060 - Bamb_6319 - amidohydrolase 744 66.67 0 920000..920794 + 264 115361061 - Bamb_6320 - extracellular solute-binding protein 745 65.99 0 920850..922034 + 394 115361062 - Bamb_6321 - porin 746 69.53 0 924056..925069 - 337 115361063 - Bamb_6322 - LacI family transcription regulator 747 69.18 0 925303..926457 + 384 115361064 - Bamb_6323 - ABC transporter related 748 65.62 0 926521..927759 + 412 115361065 - Bamb_6324 - extracellular solute-binding protein 749 65.47 0 927833..928750 + 305 115361066 - Bamb_6325 - binding-protein-dependent transport systems inner membrane component 750 67.25 0 928762..929613 + 283 115361067 - Bamb_6326 - binding-protein-dependent transport systems inner membrane component 751 69.96 0 929652..931622 + 656 115361068 - Bamb_6327 - Beta-galactosidase 752 71.68 +1 931627..932922 + 431 115361069 - Bamb_6328 - major facilitator transporter 753 67.70 0 932981..934141 - 386 115361070 - Bamb_6329 - arabinogalactan endo-1,4-beta-galactosidase 754 69.33 0 934309..935397 - 362 115361071 - Bamb_6330 - aldose 1-epimerase 755 68.51 0 935425..936618 - 397 115361072 - Bamb_6331 - AraC family transcriptional regulator 756 66.82 0 936884..938206 + 440 115361073 - Bamb_6332 - xylose isomerase 757 72.28 +1 938211..939689 + 492 115361074 - Bamb_6333 - xylulokinase 758 65.69 0 939789..940817 + 342 115361075 - Bamb_6334 - D-xylose ABC transporter, periplasmic substrate-binding protein 759 68.85 0 940889..942448 + 519 115361076 - Bamb_6335 - xylose transporter ATP-binding subunit 760 69.42 0 942445..943644 + 399 115361077 - Bamb_6336 - inner-membrane translocator 761 69.88 0 943663..944595 - 310 115361078 - Bamb_6337 - LysR family transcriptional regulator 762 67.24 0 944665..945540 + 291 115361079 - Bamb_6338 - putative oxidoreductase 763 62.91 0 945608..946006 - 132 115361080 - Bamb_6339 - cupin 2 domain-containing protein 764 65.05 0 946138..947001 - 287 115361081 - Bamb_6340 - NmrA family protein 765 69.67 0 947112..948011 + 299 115361082 - Bamb_6341 - LysR family transcriptional regulator 766 59.77 -1 948067..948240 - 57 115361083 - Bamb_6342 - hypothetical protein 767 64.39 0 948237..949247 - 336 115361084 - Bamb_6343 - hypothetical protein 768 69.88 0 949369..951327 - 652 115361085 - Bamb_6344 - beta strand repeat-containing protein 769 68.70 0 951565..953085 - 506 115361086 - Bamb_6345 - diguanylate cyclase 770 70.60 +1 953298..954770 - 490 115361087 - Bamb_6346 - succinate-semialdehyde dehydrogenase (NAD(P)(+)) 771 61.99 0 954882..955373 - 163 115361088 - Bamb_6347 - AsnC family transcriptional regulator 772 70.09 0 955460..956860 - 466 115361089 - Bamb_6348 - hypothetical protein 66.16 MEAN 4.31 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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