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Burkholderia cepacia AMMD chromosome 3, complete sequence - 1..1281472 1013 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 568 62.35 0 705676..705930 - 84 115360885 - Bamb_6144 - phosphopantetheine-binding 569 69.86 0 705990..707084 - 364 115360886 - Bamb_6145 - hypothetical protein 570 70.48 +1 707098..708435 - 445 115360887 - Bamb_6146 - hypothetical protein 571 68.50 0 708425..709186 - 253 115360888 - Bamb_6147 - hypothetical protein 572 69.79 0 709183..710400 - 405 115360889 - Bamb_6148 - hypothetical protein 573 71.25 +1 710372..711091 - 239 115360890 - Bamb_6149 - ABC transporter related 574 68.80 0 711088..712872 - 594 115360891 - Bamb_6150 - AMP-dependent synthetase and ligase 575 65.08 0 713253..714200 + 315 115360892 - Bamb_6151 - fatty acid desaturase 576 64.20 0 714261..715112 + 283 115360893 - Bamb_6152 - hypothetical protein 577 65.66 0 715731..716723 + 330 115360894 - Bamb_6153 - LysR family transcriptional regulator 578 69.94 0 716937..717761 + 274 115360895 - Bamb_6154 - alpha/beta hydrolase fold 579 68.98 0 717855..719450 - 531 115360896 - Bamb_6155 - general substrate transporter 580 72.52 +1 719518..720183 + 221 115360897 - Bamb_6156 - hypothetical protein 581 65.82 0 720134..721201 - 355 115360898 - Bamb_6157 - porin 582 67.52 0 721429..723423 - 664 115360899 - Bamb_6158 - acetyl-CoA synthetase 583 72.55 +1 723676..725529 - 617 115360900 - Bamb_6159 - RNA polymerase, sigma 28 subunit 584 69.18 0 725546..725863 - 105 115360901 - Bamb_6160 - high potential iron-sulfur protein 585 71.53 +1 725939..727213 - 424 115360902 - Bamb_6161 - cytochrome c, class I 586 66.32 0 727289..729016 - 575 115360903 - Bamb_6162 - Pyrrolo-quinoline quinone 587 73.33 +1 729789..730793 - 334 115360904 - Bamb_6163 - prolyl aminopeptidase 588 69.02 0 731241..733241 + 666 115360905 - Bamb_6164 - Fis family GAF modulated sigma54 specific transcriptional regulator 589 69.05 0 733673..734596 + 307 115360906 - Bamb_6165 - pyrroloquinoline quinone biosynthesis protein PqqB 590 67.36 0 734599..735318 + 239 115360907 - Bamb_6166 - pyrroloquinoline quinone biosynthesis protein PqqC 591 68.24 0 735342..735596 + 84 115360908 - Bamb_6167 - coenzyme PQQ synthesis D 592 66.76 0 735598..736722 + 374 115360909 - Bamb_6168 - pyrroloquinoline quinone biosynthesis protein PqqE 593 49.81 -2 737001..737261 + 86 115360910 - Bamb_6169 - hypothetical protein 594 64.05 0 737800..738870 + 356 115360911 - Bamb_6170 - AraC family transcriptional regulator 595 59.18 -1 739368..739661 - 97 115360912 - Bamb_6171 - hypothetical protein 596 67.13 0 739712..740788 + 358 115360913 - Bamb_6172 - undecaprenyl-phosphate galactose phosphotransferase 597 68.62 0 740976..742151 + 391 115360914 - Bamb_6173 - polysaccharide export protein 598 66.90 0 742148..742582 + 144 115360915 - Bamb_6174 - protein tyrosine phosphatase 599 66.58 0 742635..744872 + 745 115360916 - Bamb_6175 - exopolysaccharide transport protein family 600 66.26 0 744939..746171 + 410 115360917 - Bamb_6176 - hypothetical protein 601 65.75 0 746200..747399 + 399 115360918 - Bamb_6177 - capsule polysaccharide biosynthesis 602 66.29 0 747401..747931 + 176 115360919 - Bamb_6178 - hexapaptide repeat-containing transferase 603 67.37 0 747928..748920 + 330 115360920 - Bamb_6179 - hypothetical protein 604 67.04 0 748975..750057 + 360 115360921 - Bamb_6180 - glycosyl transferase, group 1 605 60.21 -1 750168..751220 - 350 115360922 - Bamb_6181 - IS605 family transposase OrfB 606 66.43 0 751340..752185 + 281 115360923 - Bamb_6182 - 2-dehydro-3-deoxyphosphooctonate aldolase 607 68.33 0 752203..752742 + 179 115360924 - Bamb_6183 - 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 608 68.53 0 752726..753529 + 267 115360925 - Bamb_6184 - 3-deoxy-D-manno-octulosonate cytidylyltransferase 609 68.15 0 753567..754442 + 291 115360926 - Bamb_6185 - KpsF/GutQ family protein 610 67.66 0 754505..755707 - 400 115360927 - Bamb_6186 - BNR repeat-containing glycosyl hydrolase 611 64.65 0 755704..756942 - 412 115360928 - Bamb_6187 - hypothetical protein 612 70.41 0 757153..757740 - 195 115360929 - Bamb_6188 - phosphoesterase, PA-phosphatase related 613 63.50 0 757766..758650 - 294 115360930 - Bamb_6189 - UTP-glucose-1-phosphate uridylyltransferase 614 60.26 -1 759009..759242 + 77 115360931 - Bamb_6190 - putative flagellar transcriptional activator FlhD 615 66.34 0 759361..759669 + 102 115360932 - Bamb_6191 - histone family protein nucleoid-structuring protein H-NS 616 69.36 0 759691..760767 - 358 115360933 - Bamb_6192 - DNA topoisomerase, type I, putative 617 65.11 0 761256..762218 + 320 115360934 - Bamb_6193 - periplasmic binding protein/LacI transcriptional regulator 618 69.57 0 762287..763801 + 504 115360935 - Bamb_6194 - ABC transporter related 619 71.18 +1 763798..764838 + 346 115360936 - Bamb_6195 - inner-membrane translocator 620 68.23 0 764835..765923 + 362 115360937 - Bamb_6196 - inner membrane ABC transporter permease protein YjfF 621 67.22 0 766011..768359 - 782 115360938 - Bamb_6197 - periplasmic sensor signal transduction histidine kinase 622 67.87 0 768337..769170 - 277 115360939 - Bamb_6198 - two component AraC family transcriptional regulator 623 55.31 -2 769218..769490 - 90 115360940 - Bamb_6199 - hypothetical protein 624 68.09 0 770163..770444 - 93 115360941 - Bamb_6200 - hypothetical protein 625 69.10 0 770635..774696 + 1353 115360942 - Bamb_6201 - YadA domain-containing protein 626 66.81 0 774764..775483 + 239 115360943 - Bamb_6202 - OmpA/MotB domain-containing protein 627 62.47 0 775547..775927 + 126 115360944 - Bamb_6203 - hypothetical protein 628 61.32 -1 775952..776194 + 80 115360945 - Bamb_6204 - hypothetical protein 629 57.34 -2 776277..777059 - 260 115360946 - Bamb_6205 - integrase catalytic subunit 630 59.62 -1 777113..777637 - 174 115360947 - Bamb_6206 - HMG-I and HMG-Y, DNA-binding domain-containing protein 631 65.29 0 777691..778200 + 169 115360948 - Bamb_6207 - hypothetical protein 632 64.73 0 778467..778982 + 171 115360949 - Bamb_6208 - hypothetical protein 633 67.36 0 779319..780467 + 382 115360950 - Bamb_6209 - cytochrome c oxidase, subunit II 634 64.57 0 780481..782241 + 586 115360951 - Bamb_6210 - cytochrome-c oxidase 635 68.14 0 782238..782849 + 203 115360952 - Bamb_6211 - heme/copper-type cytochrome/quinol oxidase subunit 3-like protein 636 64.45 0 782846..783568 + 240 115360953 - Bamb_6212 - cytochrome c oxidase, subunit III 637 61.70 -1 783577..783918 + 113 115360954 - Bamb_6213 - small integral membrane protein 638 62.54 0 783949..784263 + 104 115360955 - Bamb_6214 - high potential iron-sulfur protein 639 66.46 0 784337..785302 + 321 115360956 - Bamb_6215 - LysR family transcriptional regulator 640 65.33 0 785486..786760 + 424 115360957 - Bamb_6216 - sodium:dicarboxylate symporter 641 65.09 0 786760..788214 + 484 115360958 - Bamb_6217 - aspartate racemase 642 63.30 0 788400..788933 - 177 115360959 - Bamb_6218 - dehydratase 643 63.64 0 788930..790021 - 363 115360960 - Bamb_6219 - carboxymuconolactone decarboxylase 644 59.42 -1 790238..790996 + 252 115360961 - Bamb_6220 - short-chain dehydrogenase/reductase SDR 645 64.63 0 791071..792348 + 425 115360962 - Bamb_6221 - crotonyl-CoA reductase 646 67.31 0 792351..796265 + 1304 115360963 - Bamb_6222 - beta-ketoacyl synthase 647 60.30 -1 796352..796681 + 109 115360964 - Bamb_6223 - phosphopantetheine-binding 648 67.17 0 796751..797743 + 330 115360965 - Bamb_6224 - 3-oxoacyl-(acyl-carrier-protein) synthase III 649 63.11 0 797861..798619 - 252 115360966 - Bamb_6225 - short-chain dehydrogenase/reductase SDR 650 69.71 0 798705..800477 - 590 115360967 - Bamb_6226 - pyruvate phosphate dikinase 651 63.14 0 800487..802667 - 726 115360968 - Bamb_6227 - hypothetical protein 652 63.02 0 802664..803404 - 246 115360969 - Bamb_6228 - hypothetical protein 653 55.42 -2 803477..803725 - 82 115360970 - Bamb_6229 - hypothetical protein 654 60.54 -1 803770..804732 + 320 115360971 - Bamb_6230 - hypothetical protein 655 55.16 -2 804729..805232 + 167 115360972 - Bamb_6231 - phosphopantetheine-binding 656 64.93 0 805349..806386 + 345 115360973 - Bamb_6232 - 3-oxoacyl-(acyl-carrier-protein) synthase III 657 66.27 0 806469..809972 + 1167 115360974 - Bamb_6233 - 2-oxoacid ferredoxin oxidoreductase 658 66.50 0 810131..811879 - 582 115360975 - Bamb_6234 - hypothetical protein 659 67.43 0 812344..816255 + 1303 115360976 - Bamb_6235 - beta-ketoacyl synthase 660 62.17 0 816309..817487 + 392 115360977 - Bamb_6236 - Rieske (2Fe-2S) domain-containing protein 661 61.80 -1 817484..818284 - 266 115360978 - Bamb_6237 - diguanylate phosphodiesterase 662 65.54 0 818867..821080 + 737 115360979 - Bamb_6238 - periplasmic sensor signal transduction histidine kinase 663 63.22 0 821172..822419 - 415 115360980 - Bamb_6239 - UDP-glucuronosyl/UDP-glucosyltransferase 664 58.01 -1 822616..824094 + 492 115360981 - Bamb_6240 - condensation domain-containing protein 665 60.89 -1 824094..825425 + 443 115360982 - Bamb_6241 - UDP-glucuronosyl/UDP-glucosyltransferase 666 62.90 0 825410..826630 + 406 115360983 - Bamb_6242 - condensation domain-containing protein 667 64.10 0 826743..827561 - 272 115360984 - Bamb_6243 - hypothetical protein 66.16 MEAN 4.31 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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