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Burkholderia cepacia AMMD chromosome 3, complete sequence - 1..1281472 1013 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 482 70.23 0 618755..619651 - 298 115360799 - Bamb_6058 - hypothetical protein 483 71.37 +1 619709..620728 + 339 115360800 - Bamb_6059 - LysR family transcriptional regulator 484 66.67 0 620856..621515 + 219 115360801 - Bamb_6060 - hypothetical protein 485 70.30 0 621553..622020 + 155 115360802 - Bamb_6061 - hypothetical protein 486 65.20 0 622175..622651 + 158 115360803 - Bamb_6062 - hypothetical protein 487 66.67 0 622728..623900 - 390 115360804 - Bamb_6063 - porin 488 65.71 0 624062..624895 - 277 115360805 - Bamb_6064 - LuxR family transcriptional regulator 489 64.97 0 625137..626258 + 373 115360806 - Bamb_6065 - extracellular solute-binding protein 490 66.23 0 626270..627415 + 381 115360807 - Bamb_6066 - spermidine/putrescine ABC transporter ATPase subunit 491 65.53 0 627423..628394 + 323 115360808 - Bamb_6067 - binding-protein-dependent transport systems inner membrane component 492 67.74 0 628391..629323 + 310 115360809 - Bamb_6068 - binding-protein-dependent transport systems inner membrane component 493 66.48 0 629345..630913 + 522 115360810 - Bamb_6069 - hypothetical protein 494 68.06 0 630940..632232 + 430 115360811 - Bamb_6070 - FAD dependent oxidoreductase 495 68.50 0 632308..632688 + 126 115360812 - Bamb_6071 - protein of unknown function DUF861, cupin_3 496 72.67 +1 632735..634150 + 471 115360813 - Bamb_6072 - amidase 497 70.22 0 634181..635671 + 496 115360814 - Bamb_6073 - betaine-aldehyde dehydrogenase 498 72.31 +1 635959..636330 + 123 115360815 - Bamb_6074 - LrgA family protein 499 70.34 0 636327..637061 + 244 115360816 - Bamb_6075 - LrgB family protein 500 70.06 0 637295..637618 + 107 115360817 - Bamb_6076 - hypothetical protein 501 67.00 0 637752..638354 - 200 115360818 - Bamb_6077 - flavoprotein WrbA 502 66.39 0 638421..639146 - 241 115360819 - Bamb_6078 - pirin domain-containing protein 503 68.59 0 639274..640158 + 294 115360820 - Bamb_6079 - LysR family transcriptional regulator 504 66.18 0 640361..641386 + 341 115360821 - Bamb_6080 - hypothetical protein 505 61.22 -1 641628..642086 + 152 115360822 - Bamb_6081 - hypothetical protein 506 56.73 -2 642355..642837 + 160 115360823 - Bamb_6082 - hypothetical protein 507 64.63 0 643157..643402 + 81 115360824 - Bamb_6083 - CopG/Arc/MetJ family transcriptional regulator 508 64.33 0 643392..643691 + 99 115360825 - Bamb_6084 - plasmid stabilization system protein 509 63.18 0 643723..643923 - 66 115360826 - Bamb_6085 - hypothetical protein 510 63.77 0 644202..644615 + 137 115360827 - Bamb_6086 - DoxX family protein 511 71.80 +1 644768..645721 + 317 115360828 - Bamb_6087 - dTDP-4-dehydrorhamnose reductase 512 71.11 +1 646072..647511 + 479 115360829 - Bamb_6088 - hypothetical protein 513 63.03 0 647880..648209 + 109 115360830 - Bamb_6089 - histone family protein nucleoid-structuring protein H-NS 514 68.63 0 648402..648656 + 84 115360831 - Bamb_6090 - major facilitator transporter 515 64.31 0 648840..649094 + 84 115360832 - Bamb_6091 - hypothetical protein 516 68.73 0 649120..650379 + 419 115360833 - Bamb_6092 - saccharopine dehydrogenase 517 68.67 0 650557..651753 - 398 115360834 - Bamb_6093 - AraC family transcriptional regulator 518 67.74 0 651977..653368 + 463 115360835 - Bamb_6094 - amino acid permease-associated region 519 68.45 0 653427..654824 + 465 115360836 - Bamb_6095 - hypothetical protein 520 68.84 0 654855..656279 + 474 115360837 - Bamb_6096 - betaine-aldehyde dehydrogenase 521 71.86 +1 656333..657835 + 500 115360838 - Bamb_6097 - MlrC domain-containing protein 522 68.69 0 657954..659141 + 395 115360839 - Bamb_6098 - hypothetical protein 523 64.44 0 659246..659380 - 44 115360840 - Bamb_6099 - hypothetical protein 524 73.25 +1 659403..659645 + 80 115360841 - Bamb_6100 - hypothetical protein 525 71.71 +1 659794..660249 + 151 115360842 - Bamb_6101 - hypothetical protein 526 71.59 +1 660338..661150 + 270 115360843 - Bamb_6102 - alpha/beta hydrolase fold 527 68.46 0 661336..662505 + 389 115360844 ampC Bamb_6103 - beta-lactamase 528 70.23 0 662542..664590 - 682 115360845 - Bamb_6104 - squalene-hopene cyclase 529 73.27 +1 664748..665353 + 201 115360846 - Bamb_6105 - TetR family transcriptional regulator 530 63.14 0 665607..665861 + 84 115360847 - Bamb_6106 - hypothetical protein 531 65.18 0 666150..667091 - 313 115360848 - Bamb_6107 - dihydrodipicolinate synthetase 532 65.00 0 667683..669062 + 459 115360849 - Bamb_6108 - major facilitator transporter 533 57.14 -2 669413..670042 - 209 115360850 - Bamb_6109 - TetR family transcriptional regulator 534 61.89 0 670414..671544 + 376 115360851 - Bamb_6110 - alpha/beta hydrolase fold 535 61.74 -1 672108..673040 - 310 115360852 - Bamb_6111 - LysR family transcriptional regulator 536 66.09 0 673265..674131 + 288 115360853 - Bamb_6112 - NmrA family protein 537 60.57 -1 674225..675028 + 267 115360854 - Bamb_6113 - hypothetical protein 538 52.75 -2 675067..675756 + 229 115360855 - Bamb_6114 - hypothetical protein 539 56.48 -2 676025..676495 + 156 115360856 - Bamb_6115 - glycosyl hydrolase family 32 protein 540 62.09 0 676816..678411 + 531 115360857 - Bamb_6116 - levansucrase 541 52.17 -2 678793..679068 - 91 115360858 - Bamb_6117 - hypothetical protein 542 59.90 -1 679727..680554 - 275 115360859 - Bamb_6118 - short-chain dehydrogenase/reductase SDR 543 55.56 -2 680654..681031 + 125 115360860 - Bamb_6119 - MerR family transcriptional regulator 544 63.73 0 681288..681968 + 226 115360861 - Bamb_6120 - GntR family transcriptional regulator 545 68.15 0 682091..682426 - 111 115360862 - Bamb_6121 - hypothetical protein 546 67.33 0 682457..682756 - 99 115360863 - Bamb_6122 - hypothetical protein 547 66.26 0 683207..684193 + 328 115360864 - Bamb_6123 - TRAP dicarboxylate transporter, DctP subunit 548 69.08 0 684190..684768 + 192 115360865 - Bamb_6124 - tripartite ATP-independent periplasmic transporter DctQ 549 65.34 0 684773..686125 + 450 115360866 - Bamb_6125 - TRAP dicarboxylate transporter, DctM subunit 550 68.68 0 686210..687301 + 363 115360867 - Bamb_6126 - hypothetical protein 551 68.01 0 687386..688945 + 519 115360868 - Bamb_6127 - methyl-accepting chemotaxis sensory transducer 552 73.33 +1 689072..689326 - 84 115360869 - Bamb_6128 - hypothetical protein 553 72.48 +1 689358..690767 - 469 115360870 - Bamb_6129 - D-lactate dehydrogenase (cytochrome) 554 69.61 0 690770..691312 - 180 115360871 - Bamb_6130 - hypothetical protein 555 69.36 0 691367..692443 - 358 115360872 - Bamb_6131 - ABC-2 type transporter 556 71.99 +1 692436..693449 - 337 115360873 - Bamb_6132 - ABC transporter related 557 71.97 +1 693463..694536 - 357 115360874 - Bamb_6133 - taurine catabolism dioxygenase TauD/TfdA 558 70.44 0 694540..695202 - 220 115360875 - Bamb_6134 - methyltransferase type 11 559 75.22 +2 695240..696490 - 416 115360876 - Bamb_6135 - citrate synthase-like protein 560 67.32 0 696492..698339 - 615 115360877 - Bamb_6136 - acyl-CoA dehydrogenase domain-containing protein 561 74.91 +2 698339..699430 - 363 115360878 - Bamb_6137 - hypothetical protein 562 71.49 +1 699427..701001 - 524 115360879 - Bamb_6138 - AMP-dependent synthetase and ligase 563 73.38 +1 701021..702196 - 391 115360880 - Bamb_6139 - Orn/DAP/Arg decarboxylase 2 564 70.30 0 702186..703175 - 329 115360881 - Bamb_6140 - hypothetical protein 565 66.06 0 703177..704160 - 327 115360882 - Bamb_6141 - hypothetical protein 566 71.77 +1 704162..704788 - 208 115360883 - Bamb_6142 - hypothetical protein 567 74.52 +1 704790..705668 - 292 115360884 - Bamb_6143 - hypothetical protein 568 62.35 0 705676..705930 - 84 115360885 - Bamb_6144 - phosphopantetheine-binding 569 69.86 0 705990..707084 - 364 115360886 - Bamb_6145 - hypothetical protein 570 70.48 +1 707098..708435 - 445 115360887 - Bamb_6146 - hypothetical protein 571 68.50 0 708425..709186 - 253 115360888 - Bamb_6147 - hypothetical protein 572 69.79 0 709183..710400 - 405 115360889 - Bamb_6148 - hypothetical protein 573 71.25 +1 710372..711091 - 239 115360890 - Bamb_6149 - ABC transporter related 574 68.80 0 711088..712872 - 594 115360891 - Bamb_6150 - AMP-dependent synthetase and ligase 575 65.08 0 713253..714200 + 315 115360892 - Bamb_6151 - fatty acid desaturase 576 64.20 0 714261..715112 + 283 115360893 - Bamb_6152 - hypothetical protein 577 65.66 0 715731..716723 + 330 115360894 - Bamb_6153 - LysR family transcriptional regulator 578 69.94 0 716937..717761 + 274 115360895 - Bamb_6154 - alpha/beta hydrolase fold 579 68.98 0 717855..719450 - 531 115360896 - Bamb_6155 - general substrate transporter 580 72.52 +1 719518..720183 + 221 115360897 - Bamb_6156 - hypothetical protein 581 65.82 0 720134..721201 - 355 115360898 - Bamb_6157 - porin 66.16 MEAN 4.31 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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