version 1.0
Burkholderia cepacia AMMD chromosome 3, complete sequence - 1..1281472 1013 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 452 61.44 -1 582510..583868 - 452 115360769 - Bamb_6028 - major facilitator transporter 453 61.16 -1 584257..585945 - 562 115360770 - Bamb_6029 - tannase and feruloyl esterase 454 61.90 0 586423..587451 - 342 115360771 - Bamb_6030 - AraC family transcriptional regulator 455 68.54 0 587714..589099 - 461 115360772 - Bamb_6031 - general substrate transporter 456 73.41 +1 589281..590999 - 572 115360773 - Bamb_6032 - Glycerone kinase 457 68.88 0 591423..592553 - 376 115360774 - Bamb_6033 - sigma-54 dependent trancsriptional regulator 458 69.16 0 593048..593608 + 186 115360775 - Bamb_6034 - FMN reductase 459 64.86 0 593638..594741 + 367 115360776 - Bamb_6035 - luciferase family protein 460 65.94 0 594904..595593 - 229 115360777 - Bamb_6036 - lysine exporter protein LysE/YggA 461 68.78 0 595663..596514 + 283 115360778 - Bamb_6037 - LysR family transcriptional regulator 462 66.16 0 596520..597512 - 330 115360779 - Bamb_6038 - LysR family transcriptional regulator 463 68.80 0 597564..600617 + 1017 115360780 - Bamb_6039 - FAD linked oxidase domain-containing protein 464 59.83 -1 600811..601497 - 228 115360781 - Bamb_6040 - LuxR family transcriptional regulator 465 67.67 0 602089..602688 - 199 115360782 - Bamb_6041 - lysine exporter protein LysE/YggA 466 66.12 0 602844..603752 + 302 115360783 - Bamb_6042 - LysR family transcriptional regulator 467 66.75 0 603970..605214 + 414 115360784 - Bamb_6043 - sodium/hydrogen exchanger 468 65.59 0 605279..606481 - 400 115360785 - Bamb_6044 - aminotransferase, class I and II 469 64.48 0 606613..607434 - 273 115360786 - Bamb_6045 - hypothetical protein 470 68.19 0 607459..608508 - 349 115360787 - Bamb_6046 - succinylglutamate desuccinylase/aspartoacylase 471 64.36 0 608508..609329 - 273 115360788 - Bamb_6047 - hypothetical protein 472 65.54 0 609377..609643 - 88 115360789 - Bamb_6048 - phosphopantetheine-binding 473 63.11 0 609716..610642 - 308 115360790 - Bamb_6049 - chlorinating enzyme 474 63.86 0 610721..610969 - 82 115360791 - Bamb_6050 - acyl carrier protein 475 68.26 0 610986..612488 - 500 115360792 - Bamb_6051 - amino acid adenylation domain-containing protein 476 64.69 0 612485..613345 - 286 115360793 - Bamb_6052 - alpha/beta hydrolase fold 477 63.04 0 613425..614030 - 201 115360794 - Bamb_6053 - autoinducer synthesis protein 478 62.05 0 614095..614592 - 165 115360795 - Bamb_6054 - hypothetical protein 479 66.80 0 614917..615651 + 244 115360796 - Bamb_6055 - hypothetical protein 480 69.24 0 615668..616522 + 284 115360797 - Bamb_6056 - thioesterase 481 66.15 0 617001..618155 - 384 115360798 - Bamb_6057 - extracellular ligand-binding receptor 482 70.23 0 618755..619651 - 298 115360799 - Bamb_6058 - hypothetical protein 483 71.37 +1 619709..620728 + 339 115360800 - Bamb_6059 - LysR family transcriptional regulator 484 66.67 0 620856..621515 + 219 115360801 - Bamb_6060 - hypothetical protein 485 70.30 0 621553..622020 + 155 115360802 - Bamb_6061 - hypothetical protein 486 65.20 0 622175..622651 + 158 115360803 - Bamb_6062 - hypothetical protein 487 66.67 0 622728..623900 - 390 115360804 - Bamb_6063 - porin 488 65.71 0 624062..624895 - 277 115360805 - Bamb_6064 - LuxR family transcriptional regulator 489 64.97 0 625137..626258 + 373 115360806 - Bamb_6065 - extracellular solute-binding protein 490 66.23 0 626270..627415 + 381 115360807 - Bamb_6066 - spermidine/putrescine ABC transporter ATPase subunit 491 65.53 0 627423..628394 + 323 115360808 - Bamb_6067 - binding-protein-dependent transport systems inner membrane component 492 67.74 0 628391..629323 + 310 115360809 - Bamb_6068 - binding-protein-dependent transport systems inner membrane component 493 66.48 0 629345..630913 + 522 115360810 - Bamb_6069 - hypothetical protein 494 68.06 0 630940..632232 + 430 115360811 - Bamb_6070 - FAD dependent oxidoreductase 495 68.50 0 632308..632688 + 126 115360812 - Bamb_6071 - protein of unknown function DUF861, cupin_3 496 72.67 +1 632735..634150 + 471 115360813 - Bamb_6072 - amidase 497 70.22 0 634181..635671 + 496 115360814 - Bamb_6073 - betaine-aldehyde dehydrogenase 498 72.31 +1 635959..636330 + 123 115360815 - Bamb_6074 - LrgA family protein 499 70.34 0 636327..637061 + 244 115360816 - Bamb_6075 - LrgB family protein 500 70.06 0 637295..637618 + 107 115360817 - Bamb_6076 - hypothetical protein 501 67.00 0 637752..638354 - 200 115360818 - Bamb_6077 - flavoprotein WrbA 502 66.39 0 638421..639146 - 241 115360819 - Bamb_6078 - pirin domain-containing protein 503 68.59 0 639274..640158 + 294 115360820 - Bamb_6079 - LysR family transcriptional regulator 504 66.18 0 640361..641386 + 341 115360821 - Bamb_6080 - hypothetical protein 505 61.22 -1 641628..642086 + 152 115360822 - Bamb_6081 - hypothetical protein 506 56.73 -2 642355..642837 + 160 115360823 - Bamb_6082 - hypothetical protein 507 64.63 0 643157..643402 + 81 115360824 - Bamb_6083 - CopG/Arc/MetJ family transcriptional regulator 508 64.33 0 643392..643691 + 99 115360825 - Bamb_6084 - plasmid stabilization system protein 509 63.18 0 643723..643923 - 66 115360826 - Bamb_6085 - hypothetical protein 510 63.77 0 644202..644615 + 137 115360827 - Bamb_6086 - DoxX family protein 511 71.80 +1 644768..645721 + 317 115360828 - Bamb_6087 - dTDP-4-dehydrorhamnose reductase 512 71.11 +1 646072..647511 + 479 115360829 - Bamb_6088 - hypothetical protein 513 63.03 0 647880..648209 + 109 115360830 - Bamb_6089 - histone family protein nucleoid-structuring protein H-NS 514 68.63 0 648402..648656 + 84 115360831 - Bamb_6090 - major facilitator transporter 515 64.31 0 648840..649094 + 84 115360832 - Bamb_6091 - hypothetical protein 516 68.73 0 649120..650379 + 419 115360833 - Bamb_6092 - saccharopine dehydrogenase 517 68.67 0 650557..651753 - 398 115360834 - Bamb_6093 - AraC family transcriptional regulator 518 67.74 0 651977..653368 + 463 115360835 - Bamb_6094 - amino acid permease-associated region 519 68.45 0 653427..654824 + 465 115360836 - Bamb_6095 - hypothetical protein 520 68.84 0 654855..656279 + 474 115360837 - Bamb_6096 - betaine-aldehyde dehydrogenase 521 71.86 +1 656333..657835 + 500 115360838 - Bamb_6097 - MlrC domain-containing protein 522 68.69 0 657954..659141 + 395 115360839 - Bamb_6098 - hypothetical protein 523 64.44 0 659246..659380 - 44 115360840 - Bamb_6099 - hypothetical protein 524 73.25 +1 659403..659645 + 80 115360841 - Bamb_6100 - hypothetical protein 525 71.71 +1 659794..660249 + 151 115360842 - Bamb_6101 - hypothetical protein 526 71.59 +1 660338..661150 + 270 115360843 - Bamb_6102 - alpha/beta hydrolase fold 527 68.46 0 661336..662505 + 389 115360844 ampC Bamb_6103 - beta-lactamase 528 70.23 0 662542..664590 - 682 115360845 - Bamb_6104 - squalene-hopene cyclase 529 73.27 +1 664748..665353 + 201 115360846 - Bamb_6105 - TetR family transcriptional regulator 530 63.14 0 665607..665861 + 84 115360847 - Bamb_6106 - hypothetical protein 531 65.18 0 666150..667091 - 313 115360848 - Bamb_6107 - dihydrodipicolinate synthetase 532 65.00 0 667683..669062 + 459 115360849 - Bamb_6108 - major facilitator transporter 533 57.14 -2 669413..670042 - 209 115360850 - Bamb_6109 - TetR family transcriptional regulator 534 61.89 0 670414..671544 + 376 115360851 - Bamb_6110 - alpha/beta hydrolase fold 535 61.74 -1 672108..673040 - 310 115360852 - Bamb_6111 - LysR family transcriptional regulator 536 66.09 0 673265..674131 + 288 115360853 - Bamb_6112 - NmrA family protein 537 60.57 -1 674225..675028 + 267 115360854 - Bamb_6113 - hypothetical protein 538 52.75 -2 675067..675756 + 229 115360855 - Bamb_6114 - hypothetical protein 539 56.48 -2 676025..676495 + 156 115360856 - Bamb_6115 - glycosyl hydrolase family 32 protein 540 62.09 0 676816..678411 + 531 115360857 - Bamb_6116 - levansucrase 541 52.17 -2 678793..679068 - 91 115360858 - Bamb_6117 - hypothetical protein 542 59.90 -1 679727..680554 - 275 115360859 - Bamb_6118 - short-chain dehydrogenase/reductase SDR 543 55.56 -2 680654..681031 + 125 115360860 - Bamb_6119 - MerR family transcriptional regulator 544 63.73 0 681288..681968 + 226 115360861 - Bamb_6120 - GntR family transcriptional regulator 545 68.15 0 682091..682426 - 111 115360862 - Bamb_6121 - hypothetical protein 546 67.33 0 682457..682756 - 99 115360863 - Bamb_6122 - hypothetical protein 547 66.26 0 683207..684193 + 328 115360864 - Bamb_6123 - TRAP dicarboxylate transporter, DctP subunit 548 69.08 0 684190..684768 + 192 115360865 - Bamb_6124 - tripartite ATP-independent periplasmic transporter DctQ 549 65.34 0 684773..686125 + 450 115360866 - Bamb_6125 - TRAP dicarboxylate transporter, DctM subunit 550 68.68 0 686210..687301 + 363 115360867 - Bamb_6126 - hypothetical protein 551 68.01 0 687386..688945 + 519 115360868 - Bamb_6127 - methyl-accepting chemotaxis sensory transducer 66.16 MEAN 4.31 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0