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Burkholderia cepacia AMMD chromosome 3, complete sequence - 1..1281472 1013 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 372 62.25 0 481492..482034 + 180 115360689 - Bamb_5947 - hypothetical protein 373 62.79 0 482255..482512 + 85 115360690 - Bamb_5948 - hypothetical protein 374 60.81 -1 482745..483632 - 295 115360691 - Bamb_5949 - DNA-binding transcriptional regulator CynR 375 56.40 -2 483695..484327 + 210 115360692 - Bamb_5950 - hypothetical protein 376 61.25 -1 484545..485024 - 159 115360693 - Bamb_5951 - hypothetical protein 377 61.04 -1 485151..485399 - 82 115360694 - Bamb_5952 - hypothetical protein 378 58.84 -1 485564..486151 + 195 115360695 - Bamb_5953 - TetR family transcriptional regulator 379 67.05 0 486707..487741 - 344 115360696 - Bamb_5954 - alpha/beta hydrolase domain-containing protein 380 65.73 0 487809..488234 - 141 115360697 - Bamb_5955 - OsmC family protein 381 62.08 0 488460..489026 - 188 115360698 - Bamb_5956 - TetR family transcriptional regulator 382 66.03 0 489446..491494 - 682 115360699 - Bamb_5957 - putative lipoprotein 383 73.26 +1 492867..493382 + 171 115360700 - Bamb_5959 - methionine-R-sulfoxide reductase 384 72.63 +1 493418..495295 + 625 115360701 - Bamb_5960 - cytochrome c biogenesis protein, transmembrane region 385 68.42 0 495348..496088 + 246 115360702 - Bamb_5961 - methionine sulfoxide reductase A 386 67.91 0 496307..497428 + 373 115360703 - Bamb_5962 - Rieske (2Fe-2S) domain-containing protein 387 69.00 0 497490..498947 - 485 115360704 - Bamb_5963 - dihydropyrimidinase 388 67.53 0 498994..500502 - 502 115360705 - Bamb_5964 - NCS1 nucleoside transporter 389 66.97 0 500602..501909 - 435 115360706 - Bamb_5965 - dihydropyrimidine dehydrogenase 390 70.85 +1 501982..503319 - 445 115360707 - Bamb_5966 - putative oxidoreductase 391 67.60 0 503449..504729 - 426 115360708 - Bamb_5967 - allantoate amidohydrolase 392 66.96 0 505093..505785 + 230 115360709 - Bamb_5968 - TetR family transcriptional regulator 393 68.77 0 505901..507091 - 396 115360710 - Bamb_5969 - acetyl-CoA acetyltransferases 394 68.62 0 507128..507895 - 255 115360711 - Bamb_5970 - short-chain dehydrogenase/reductase SDR 395 68.16 0 507916..509589 - 557 115360712 - Bamb_5971 - AMP-dependent synthetase and ligase 396 69.45 0 509727..510731 + 334 115360713 - Bamb_5972 - AraC family transcriptional regulator 397 59.12 -1 510953..511111 + 52 115360714 - Bamb_5973 - hypothetical protein 398 60.22 -1 511213..511584 + 123 115360715 - Bamb_5974 - hypothetical protein 399 62.79 0 517772..518209 + 145 115360716 - Bamb_5975 - hypothetical protein 400 67.54 0 518376..519059 - 227 115360717 - Bamb_5976 - hypothetical protein 401 64.95 0 519069..519593 - 174 115360718 - Bamb_5977 - metal dependent phosphohydrolase 402 71.16 +1 519715..523185 - 1156 115360719 - Bamb_5978 - hypothetical protein 403 66.75 0 523189..524439 - 416 115360720 - Bamb_5979 - metallophosphoesterase 404 72.22 +1 524962..525519 - 185 115360721 - Bamb_5980 - late embryogenesis abundant protein 405 65.01 0 525766..526188 - 140 115360722 - Bamb_5981 - hypothetical protein 406 68.28 0 526283..528271 - 662 115360723 - Bamb_5982 - gamma-glutamyltransferase 407 67.02 0 528857..529138 - 93 115360724 - Bamb_5983 - hypothetical protein 408 66.95 0 529407..532637 + 1076 115360725 - Bamb_5984 - acriflavin resistance protein 409 71.56 +1 532687..534054 + 455 115360726 - Bamb_5985 - RND family efflux transporter MFP subunit 410 69.54 0 534085..535578 + 497 115360727 - Bamb_5986 - RND efflux system outer membrane lipoprotein 411 69.91 0 535559..537040 - 493 115360728 - Bamb_5987 - heavy metal sensor signal transduction histidine kinase 412 64.16 0 537037..537714 - 225 115360729 - Bamb_5988 - two component heavy metal response transcriptional regulator 413 65.21 0 538060..538539 - 159 115360730 - Bamb_5989 - hypothetical protein 414 68.64 0 538536..538991 - 151 115360731 - Bamb_5990 - hypothetical protein 415 61.68 -1 539297..539938 - 213 115360732 - Bamb_5991 - metal dependent phosphohydrolase 416 67.43 0 540082..541128 + 348 115360733 - Bamb_5992 - AraC family transcriptional regulator 417 65.71 0 541587..541898 + 103 115360734 - Bamb_5993 - hypothetical protein 418 64.85 0 542210..542923 + 237 115360735 - Bamb_5994 - carboxymethylenebutenolidase 419 68.93 0 543030..544001 - 323 115360736 - Bamb_5995 - aliphatic sulfonate ABC transporter periplasmic ligand-binding protein 420 67.41 0 544274..545215 - 313 115360737 - Bamb_5996 - LysR family transcriptional regulator 421 69.46 0 545452..546741 - 429 115360738 - Bamb_5997 - adenylosuccinate synthase 422 68.55 0 546883..547785 + 300 115360739 - Bamb_5998 - LysR family transcriptional regulator 423 64.22 0 548002..548328 - 108 115360740 - Bamb_5999 - hypothetical protein 424 60.82 -1 550797..552113 + 438 115360741 - Bamb_6000 - hypothetical protein 425 64.15 0 552206..553237 - 343 115360742 - Bamb_6001 - parB-like partition proteins 426 57.47 -2 553230..553925 - 231 115360743 - Bamb_6002 - cobyrinic acid a,c-diamide synthase 427 61.58 -1 554315..554707 - 130 115360744 - Bamb_6003 - hypothetical protein 428 64.44 0 555820..556944 - 374 115360745 - Bamb_6004 - Zn-dependent hydrolase of the beta-lactamase fold-like protein 429 66.51 0 557056..557682 + 208 115360746 - Bamb_6005 - TetR family transcriptional regulator 430 67.07 0 557984..558475 + 163 115360747 - Bamb_6006 - flavodoxin/nitric oxide synthase 431 64.62 0 558653..559237 - 194 115360748 - Bamb_6007 - hypothetical protein 432 68.42 0 559892..560746 + 284 115360749 - Bamb_6008 - ProQ activator of osmoprotectant transporter ProP 433 67.56 0 561377..562495 + 372 115360750 - Bamb_6009 - hypothetical protein 434 62.99 0 562595..563002 - 135 115360751 - Bamb_6010 - glyoxalase/bleomycin resistance protein/dioxygenase 435 65.49 0 563106..563531 - 141 115360752 - Bamb_6011 - molybdenum-pterin binding 436 71.20 +1 563714..565213 - 499 115360753 - Bamb_6012 - RND efflux system outer membrane lipoprotein 437 69.68 0 565210..566205 - 331 115360754 - Bamb_6013 - RND family efflux transporter MFP subunit 438 59.15 -1 566208..566420 - 70 115360755 - Bamb_6014 - hypothetical protein 439 71.01 +1 566455..568596 - 713 115360756 - Bamb_6015 - fusaric acid resistance protein region 440 71.25 +1 568593..569072 - 159 115360757 - Bamb_6016 - MarR family transcriptional regulator 441 67.87 0 569482..570894 + 470 115360758 - Bamb_6017 - GntR family transcriptional regulator 442 70.37 0 571000..571971 + 323 115360759 - Bamb_6018 - threonine dehydratase 443 72.44 +1 571973..572977 + 334 115360760 - Bamb_6019 - ornithine cyclodeaminase 444 67.66 0 572988..574196 + 402 115360761 - Bamb_6020 - peptidase M24 445 69.40 0 574201..575226 + 341 115360762 - Bamb_6021 - succinylglutamate desuccinylase/aspartoacylase 446 65.62 0 575231..575710 + 159 115360763 - Bamb_6022 - AsnC family transcriptional regulator 447 69.06 0 575807..577312 + 501 115360764 - Bamb_6023 - succinate-semialdehyde dehydrogenase (NAD(P)(+)) 448 66.67 0 577333..578727 + 464 115360765 - Bamb_6024 - hypothetical protein 449 63.67 0 578843..579775 - 310 115360766 - Bamb_6025 - beta-lactamase domain-containing protein 450 62.86 0 579999..581651 - 550 115360767 - Bamb_6026 - AMP-dependent synthetase and ligase 451 61.83 -1 581666..582430 - 254 115360768 - Bamb_6027 - nitroreductase 452 61.44 -1 582510..583868 - 452 115360769 - Bamb_6028 - major facilitator transporter 453 61.16 -1 584257..585945 - 562 115360770 - Bamb_6029 - tannase and feruloyl esterase 454 61.90 0 586423..587451 - 342 115360771 - Bamb_6030 - AraC family transcriptional regulator 455 68.54 0 587714..589099 - 461 115360772 - Bamb_6031 - general substrate transporter 456 73.41 +1 589281..590999 - 572 115360773 - Bamb_6032 - Glycerone kinase 457 68.88 0 591423..592553 - 376 115360774 - Bamb_6033 - sigma-54 dependent trancsriptional regulator 458 69.16 0 593048..593608 + 186 115360775 - Bamb_6034 - FMN reductase 459 64.86 0 593638..594741 + 367 115360776 - Bamb_6035 - luciferase family protein 460 65.94 0 594904..595593 - 229 115360777 - Bamb_6036 - lysine exporter protein LysE/YggA 461 68.78 0 595663..596514 + 283 115360778 - Bamb_6037 - LysR family transcriptional regulator 462 66.16 0 596520..597512 - 330 115360779 - Bamb_6038 - LysR family transcriptional regulator 463 68.80 0 597564..600617 + 1017 115360780 - Bamb_6039 - FAD linked oxidase domain-containing protein 464 59.83 -1 600811..601497 - 228 115360781 - Bamb_6040 - LuxR family transcriptional regulator 465 67.67 0 602089..602688 - 199 115360782 - Bamb_6041 - lysine exporter protein LysE/YggA 466 66.12 0 602844..603752 + 302 115360783 - Bamb_6042 - LysR family transcriptional regulator 467 66.75 0 603970..605214 + 414 115360784 - Bamb_6043 - sodium/hydrogen exchanger 468 65.59 0 605279..606481 - 400 115360785 - Bamb_6044 - aminotransferase, class I and II 469 64.48 0 606613..607434 - 273 115360786 - Bamb_6045 - hypothetical protein 470 68.19 0 607459..608508 - 349 115360787 - Bamb_6046 - succinylglutamate desuccinylase/aspartoacylase 471 64.36 0 608508..609329 - 273 115360788 - Bamb_6047 - hypothetical protein 66.16 MEAN 4.31 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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