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Burkholderia cepacia AMMD chromosome 3, complete sequence - 1..1281472 1013 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 159 65.48 0 186310..187155 - 281 115360476 - Bamb_5732 - abortive infection protein 160 68.82 0 187213..187629 - 138 115360477 - Bamb_5733 - OsmC family protein 161 65.85 0 187676..187921 - 81 115360478 - Bamb_5734 - hypothetical protein 162 60.18 -1 188247..188693 + 148 115360479 - Bamb_5735 - protein of unknown function DUF861, cupin_3 163 66.67 0 188784..190037 + 417 115360480 - Bamb_5736 - condensation domain-containing protein 164 68.01 0 190130..191323 - 397 115360481 - Bamb_5737 - major facilitator transporter 165 68.32 0 191496..191918 - 140 115360482 - Bamb_5738 - hypothetical protein 166 67.02 0 191941..192789 - 282 115360483 - Bamb_5739 - short-chain dehydrogenase/reductase SDR 167 68.08 0 193168..194298 - 376 115360484 - Bamb_5740 - periplasmic sensor signal transduction histidine kinase 168 67.97 0 194434..194817 - 127 115360485 - Bamb_5741 - response regulator receiver protein 169 63.64 0 195045..195704 - 219 115360486 - Bamb_5742 - two component LuxR family transcriptional regulator 170 69.28 0 195822..200879 - 1685 115360487 - Bamb_5743 - ATPase domain-containing protein 171 63.72 0 201242..201817 + 191 115360488 - Bamb_5744 - hypothetical protein 172 66.46 0 202015..202500 + 161 115360489 - Bamb_5745 - hypothetical protein 173 64.85 0 202577..203017 - 146 115360490 - Bamb_5746 - hypothetical protein 174 63.08 0 203114..203503 - 129 115360491 - Bamb_5747 - hypothetical protein 175 67.23 0 203742..205154 - 470 115360492 - Bamb_5748 - GAF sensor signal transduction histidine kinase 176 59.88 -1 205487..206164 + 225 115360493 - Bamb_5749 - TetR family transcriptional regulator 177 72.16 +1 206222..207076 + 284 115360494 - Bamb_5750 - molybdopterin dehydrogenase, FAD-binding 178 69.32 0 207057..209879 + 940 115360495 - Bamb_5751 - aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding 179 64.55 0 209907..211184 + 425 115360496 - Bamb_5752 - major facilitator transporter 180 66.67 0 211225..212004 - 259 115360497 - Bamb_5753 - GCN5-related N-acetyltransferase 181 67.46 0 212154..215663 - 1169 115360498 - Bamb_5754 - pyruvate carboxylase 182 64.37 0 216021..217022 - 333 115360499 - Bamb_5755 - LysR family transcriptional regulator 183 67.80 0 217440..218933 - 497 115360500 - Bamb_5756 - betaine-aldehyde dehydrogenase 184 68.09 0 218950..220281 - 443 115360501 - Bamb_5757 - FAD dependent oxidoreductase 185 66.10 0 220288..221175 - 295 115360502 - Bamb_5758 - dihydrodipicolinate synthetase 186 68.21 0 221335..222630 - 431 115360503 - Bamb_5759 - glycine hydroxymethyltransferase 187 63.38 0 222753..223634 - 293 115360504 - Bamb_5760 - substrate-binding region of ABC-type glycine betaine transport system 188 66.33 0 223785..224672 - 295 115360505 - Bamb_5761 - binding-protein-dependent transport systems inner membrane component 189 65.66 0 224669..225958 - 429 115360506 - Bamb_5762 - glycine betaine/L-proline ABC transporter, ATPase subunit 190 65.58 0 227216..228871 + 551 115360507 - Bamb_5763 - AMP-dependent synthetase and ligase 191 67.12 0 228868..229755 + 295 115360508 - Bamb_5764 - hypothetical protein 192 67.38 0 229755..230870 + 371 115360509 - Bamb_5765 - 3-oxoacyl-(acyl-carrier-protein) synthase 193 67.57 0 230867..231865 + 332 115360510 - Bamb_5766 - 3-oxoacyl-(acyl carrier protein) synthase III 194 64.44 0 231871..232767 + 298 115360511 - Bamb_5767 - beta-lactamase domain-containing protein 195 66.62 0 232797..236675 + 1292 115360512 - Bamb_5768 - AMP-dependent synthetase and ligase 196 65.87 0 236687..238825 + 712 115360513 - Bamb_5769 - hypothetical protein 197 66.43 0 239005..239859 - 284 115360514 - Bamb_5770 - 3-hydroxybutyryl-CoA dehydrogenase 198 67.76 0 239898..241091 - 397 115360515 - Bamb_5771 - beta-ketothiolase 199 65.35 0 241140..242813 - 557 115360516 - Bamb_5772 - electron-transferring-flavoprotein dehydrogenase 200 67.28 0 242848..244638 - 596 115360517 - Bamb_5773 - acyl-CoA dehydrogenase domain-containing protein 201 68.41 0 245124..246041 - 305 115360518 - Bamb_5774 - LysR family transcriptional regulator 202 66.54 0 246180..246944 + 254 115360519 - Bamb_5775 - short-chain dehydrogenase/reductase SDR 203 64.55 0 247019..247726 + 235 115360520 - Bamb_5776 - pirin domain-containing protein 204 65.14 0 247966..248556 + 196 115360521 - Bamb_5777 - putative transcriptional regulator protein 205 68.14 0 249076..250707 + 543 115360522 pntA Bamb_5778 - NAD(P) transhydrogenase subunit alpha 206 66.03 0 250721..252133 + 470 115360523 - Bamb_5779 - NAD(P) transhydrogenase, beta subunit 207 66.01 0 252243..253316 + 357 115360524 - Bamb_5780 - dihydrokaempferol 4-reductase 208 67.43 0 253474..254520 - 348 115360525 - Bamb_5781 - AraC family transcriptional regulator 209 68.56 0 254640..256274 - 544 115360526 - Bamb_5782 - AMP-dependent synthetase and ligase 210 71.12 +1 256593..257693 + 366 115360527 - Bamb_5783 - AraC family transcriptional regulator 211 71.55 +1 257720..259213 - 497 115360528 - Bamb_5784 - periplasmic sensor signal transduction histidine kinase 212 68.75 0 259213..259932 - 239 115360529 - Bamb_5785 - two component transcriptional regulator 213 64.16 0 260229..261266 - 345 115360530 - Bamb_5786 - LysR family transcriptional regulator 214 68.82 0 261351..262094 - 247 115360531 - Bamb_5787 - NmrA family protein 215 69.82 0 262300..263790 + 496 115360532 - Bamb_5788 - GntR family transcriptional regulator 216 66.07 0 264080..264580 + 166 115360533 - Bamb_5789 - OsmC family protein 217 59.38 -1 264701..265702 + 333 115360534 - Bamb_5790 - membrane protein-like protein 218 64.09 0 265788..267341 - 517 115360535 - Bamb_5791 - EmrB/QacA family drug resistance transporter 219 62.86 0 267444..267758 - 104 115360536 - Bamb_5792 - hypothetical protein 220 66.87 0 267879..268379 + 166 115360537 - Bamb_5793 - OsmC family protein 221 60.62 -1 268559..269038 + 159 115360538 - Bamb_5794 - alkylhydroperoxidase 222 61.52 -1 269043..269450 + 135 115360539 - Bamb_5795 - cupin 2 domain-containing protein 223 60.98 -1 269762..270007 + 81 115360540 - Bamb_5796 - Zn-dependent alcohol dehydrogenases class III-like protein 224 63.54 0 270030..270605 + 191 115360541 - Bamb_5797 - glutathione-dependent formaldehyde-activating enzyme 225 57.35 -2 271510..271713 + 67 115360542 - Bamb_5798 - cold-shock DNA-binding domain-containing protein 226 65.51 0 271764..272108 + 114 115360543 - Bamb_5799 - hypothetical protein 227 60.00 -1 272446..272730 + 94 115360544 - Bamb_5800 - hypothetical protein 228 57.50 -2 272747..272986 + 79 115360545 - Bamb_5801 - hypothetical protein 229 60.56 -1 273020..273232 + 70 115360546 - Bamb_5802 - ribosomal protein S21 230 60.19 -1 273893..274108 + 71 115360547 - Bamb_5804 - hypothetical protein 231 60.00 -1 274243..274527 + 94 115360548 - Bamb_5805 - hypothetical protein 232 68.69 0 274845..275537 - 230 115360549 - Bamb_5806 - hypothetical protein 233 66.00 0 275627..276073 - 148 115360550 - Bamb_5807 - DoxX family protein 234 67.41 0 276075..277967 - 630 115360551 - Bamb_5808 - amidohydrolase 3 235 61.31 -1 277986..278153 - 55 115360552 - Bamb_5809 - hypothetical protein 236 63.61 0 278319..279005 - 228 115360553 - Bamb_5810 - isochorismatase hydrolase 237 69.15 0 279312..279593 + 93 115360554 - Bamb_5811 - hypothetical protein 238 69.42 0 279669..280577 + 302 115360555 - Bamb_5812 - LysR family transcriptional regulator 239 70.38 0 280672..282447 - 591 115360556 - Bamb_5813 - transcriptional regulator 240 66.06 0 282813..283634 - 273 115360557 - Bamb_5814 - alpha/beta hydrolase fold 241 69.21 0 283703..284173 - 156 115360558 - Bamb_5815 - hypothetical protein 242 66.05 0 284532..285506 + 324 115360559 - Bamb_5816 - alpha/beta hydrolase fold 243 68.91 0 285510..285776 + 88 115360560 - Bamb_5817 - hypothetical protein 244 69.48 0 285841..287121 + 426 115360561 - Bamb_5818 - cytochrome c, class I 245 67.47 0 287118..287618 + 166 115360562 - Bamb_5819 - 2Fe-2S iron-sulfur cluster binding domain-containing protein 246 67.99 0 287618..289879 + 753 115360563 - Bamb_5820 - putative aldehyde dehydrogenase 247 66.01 0 289947..290864 + 305 115360564 - Bamb_5821 - LysR family transcriptional regulator 248 69.38 0 291105..292322 + 405 115360565 - Bamb_5822 - major facilitator transporter 249 69.72 0 292492..293604 + 370 115360566 - Bamb_5823 - NADH:flavin oxidoreductase/NADH oxidase 250 71.43 +1 293683..294354 - 223 115360567 - Bamb_5824 - metal-dependent phosphohydrolase 251 69.77 0 294429..296360 - 643 115360568 - Bamb_5825 - amidohydrolase 3 252 71.76 +1 296467..299313 - 948 115360569 - Bamb_5826 - transcriptional regulator 253 67.33 0 299705..300613 + 302 115360570 - Bamb_5827 - AraC family transcriptional regulator 254 67.47 0 300714..301703 - 329 115360571 - Bamb_5828 - beta-lactamase domain-containing protein 255 69.09 0 301898..302803 + 301 115360572 - Bamb_5829 - LysR family transcriptional regulator 256 67.28 0 302822..304297 - 491 115360573 - Bamb_5830 - hypothetical protein 257 66.04 0 304297..305256 - 319 115360574 - Bamb_5831 - hypothetical protein 258 68.33 0 305376..305915 - 179 115360575 - Bamb_5832 - hypothetical protein 66.16 MEAN 4.31 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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