version 1.0
Burkholderia cepacia AMMD chromosome 3, complete sequence - 1..1281472 1013 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 127 62.15 0 144442..150756 + 2104 115360444 - Bamb_5700 - serine/threonine protein kinase 128 61.02 -1 150753..152099 + 448 115360445 - Bamb_5701 - hypothetical protein 129 55.45 -2 152170..152472 - 100 115360446 - Bamb_5702 - hypothetical protein 130 66.45 0 153331..154242 - 303 115360447 - Bamb_5703 - hypothetical protein 131 60.88 -1 154302..154664 - 120 115360448 - Bamb_5704 - TfoX domain-containing protein 132 72.48 +1 154704..156440 - 578 115360449 - Bamb_5705 - phage integrase family protein 133 67.85 0 156540..157805 - 421 115360450 - Bamb_5706 - major facilitator transporter 134 69.33 0 157821..158609 - 262 115360451 - Bamb_5707 - PpiC-type peptidyl-prolyl cis-trans isomerase 135 64.47 0 158619..159302 - 227 115360452 - Bamb_5708 - respiratory nitrate reductase, gamma subunit 136 71.51 +1 159327..160028 - 233 115360453 - Bamb_5709 - nitrate reductase molybdenum cofactor assembly chaperone 137 65.04 0 160025..161560 - 511 115360454 - Bamb_5710 - nitrate reductase, beta subunit 138 66.30 0 161557..165402 - 1281 115360455 - Bamb_5711 - nitrate reductase, alpha subunit 139 67.67 0 165755..166945 + 396 115360456 - Bamb_5712 - TPR repeat-containing protein 140 67.71 0 167052..167243 - 63 115360457 - Bamb_5713 - hypothetical protein 141 68.33 0 167258..167737 - 159 115360458 - Bamb_5714 - UspA domain-containing protein 142 70.60 +1 168002..168763 + 253 115360459 - Bamb_5715 - 2-keto-4-pentenoate hydratase-like protein 143 69.35 0 168794..169054 + 86 115360460 - Bamb_5716 - hypothetical protein 144 71.13 +1 169045..170457 + 470 115360461 - Bamb_5717 - hypothetical protein 145 68.95 0 170503..171555 - 350 115360462 - Bamb_5718 - AraC family transcriptional regulator 146 64.22 0 171703..172029 - 108 115360463 - Bamb_5719 - hypothetical protein 147 70.32 0 172061..173566 - 501 115360464 - Bamb_5720 - hypothetical protein 148 69.38 0 173969..176140 + 723 115360465 - Bamb_5721 - hypothetical protein 149 68.64 0 176148..176855 + 235 115360466 - Bamb_5722 - hypothetical protein 150 66.07 0 176937..177773 - 278 115360467 - Bamb_5723 - alpha/beta hydrolase fold 151 67.20 0 178019..178393 + 124 115360468 - Bamb_5724 - glyoxalase/bleomycin resistance protein/dioxygenase 152 68.71 0 178474..179307 - 277 115360469 - Bamb_5725 - short chain dehydrogenase 153 68.00 0 179402..180373 + 323 115360470 - Bamb_5726 - AraC family transcriptional regulator 154 67.52 0 180404..181576 - 390 115360471 - Bamb_5727 - aldose 1-epimerase 155 65.09 0 181755..183083 - 442 115360472 - Bamb_5728 - major facilitator transporter 156 67.88 0 183319..184224 + 301 115360473 - Bamb_5729 - 2-dehydropantoate 2-reductase 157 67.00 0 184645..185556 - 303 115360474 - Bamb_5730 - putative transmembrane anti-sigma factor 158 67.21 0 185559..186107 - 182 115360475 - Bamb_5731 - ECF subfamily RNA polymerase sigma-24 factor 159 65.48 0 186310..187155 - 281 115360476 - Bamb_5732 - abortive infection protein 160 68.82 0 187213..187629 - 138 115360477 - Bamb_5733 - OsmC family protein 161 65.85 0 187676..187921 - 81 115360478 - Bamb_5734 - hypothetical protein 162 60.18 -1 188247..188693 + 148 115360479 - Bamb_5735 - protein of unknown function DUF861, cupin_3 163 66.67 0 188784..190037 + 417 115360480 - Bamb_5736 - condensation domain-containing protein 164 68.01 0 190130..191323 - 397 115360481 - Bamb_5737 - major facilitator transporter 165 68.32 0 191496..191918 - 140 115360482 - Bamb_5738 - hypothetical protein 166 67.02 0 191941..192789 - 282 115360483 - Bamb_5739 - short-chain dehydrogenase/reductase SDR 167 68.08 0 193168..194298 - 376 115360484 - Bamb_5740 - periplasmic sensor signal transduction histidine kinase 168 67.97 0 194434..194817 - 127 115360485 - Bamb_5741 - response regulator receiver protein 169 63.64 0 195045..195704 - 219 115360486 - Bamb_5742 - two component LuxR family transcriptional regulator 170 69.28 0 195822..200879 - 1685 115360487 - Bamb_5743 - ATPase domain-containing protein 171 63.72 0 201242..201817 + 191 115360488 - Bamb_5744 - hypothetical protein 172 66.46 0 202015..202500 + 161 115360489 - Bamb_5745 - hypothetical protein 173 64.85 0 202577..203017 - 146 115360490 - Bamb_5746 - hypothetical protein 174 63.08 0 203114..203503 - 129 115360491 - Bamb_5747 - hypothetical protein 175 67.23 0 203742..205154 - 470 115360492 - Bamb_5748 - GAF sensor signal transduction histidine kinase 176 59.88 -1 205487..206164 + 225 115360493 - Bamb_5749 - TetR family transcriptional regulator 177 72.16 +1 206222..207076 + 284 115360494 - Bamb_5750 - molybdopterin dehydrogenase, FAD-binding 178 69.32 0 207057..209879 + 940 115360495 - Bamb_5751 - aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding 179 64.55 0 209907..211184 + 425 115360496 - Bamb_5752 - major facilitator transporter 180 66.67 0 211225..212004 - 259 115360497 - Bamb_5753 - GCN5-related N-acetyltransferase 181 67.46 0 212154..215663 - 1169 115360498 - Bamb_5754 - pyruvate carboxylase 182 64.37 0 216021..217022 - 333 115360499 - Bamb_5755 - LysR family transcriptional regulator 183 67.80 0 217440..218933 - 497 115360500 - Bamb_5756 - betaine-aldehyde dehydrogenase 184 68.09 0 218950..220281 - 443 115360501 - Bamb_5757 - FAD dependent oxidoreductase 185 66.10 0 220288..221175 - 295 115360502 - Bamb_5758 - dihydrodipicolinate synthetase 186 68.21 0 221335..222630 - 431 115360503 - Bamb_5759 - glycine hydroxymethyltransferase 187 63.38 0 222753..223634 - 293 115360504 - Bamb_5760 - substrate-binding region of ABC-type glycine betaine transport system 188 66.33 0 223785..224672 - 295 115360505 - Bamb_5761 - binding-protein-dependent transport systems inner membrane component 189 65.66 0 224669..225958 - 429 115360506 - Bamb_5762 - glycine betaine/L-proline ABC transporter, ATPase subunit 190 65.58 0 227216..228871 + 551 115360507 - Bamb_5763 - AMP-dependent synthetase and ligase 191 67.12 0 228868..229755 + 295 115360508 - Bamb_5764 - hypothetical protein 192 67.38 0 229755..230870 + 371 115360509 - Bamb_5765 - 3-oxoacyl-(acyl-carrier-protein) synthase 193 67.57 0 230867..231865 + 332 115360510 - Bamb_5766 - 3-oxoacyl-(acyl carrier protein) synthase III 194 64.44 0 231871..232767 + 298 115360511 - Bamb_5767 - beta-lactamase domain-containing protein 195 66.62 0 232797..236675 + 1292 115360512 - Bamb_5768 - AMP-dependent synthetase and ligase 196 65.87 0 236687..238825 + 712 115360513 - Bamb_5769 - hypothetical protein 197 66.43 0 239005..239859 - 284 115360514 - Bamb_5770 - 3-hydroxybutyryl-CoA dehydrogenase 198 67.76 0 239898..241091 - 397 115360515 - Bamb_5771 - beta-ketothiolase 199 65.35 0 241140..242813 - 557 115360516 - Bamb_5772 - electron-transferring-flavoprotein dehydrogenase 200 67.28 0 242848..244638 - 596 115360517 - Bamb_5773 - acyl-CoA dehydrogenase domain-containing protein 201 68.41 0 245124..246041 - 305 115360518 - Bamb_5774 - LysR family transcriptional regulator 202 66.54 0 246180..246944 + 254 115360519 - Bamb_5775 - short-chain dehydrogenase/reductase SDR 203 64.55 0 247019..247726 + 235 115360520 - Bamb_5776 - pirin domain-containing protein 204 65.14 0 247966..248556 + 196 115360521 - Bamb_5777 - putative transcriptional regulator protein 205 68.14 0 249076..250707 + 543 115360522 pntA Bamb_5778 - NAD(P) transhydrogenase subunit alpha 206 66.03 0 250721..252133 + 470 115360523 - Bamb_5779 - NAD(P) transhydrogenase, beta subunit 207 66.01 0 252243..253316 + 357 115360524 - Bamb_5780 - dihydrokaempferol 4-reductase 208 67.43 0 253474..254520 - 348 115360525 - Bamb_5781 - AraC family transcriptional regulator 209 68.56 0 254640..256274 - 544 115360526 - Bamb_5782 - AMP-dependent synthetase and ligase 210 71.12 +1 256593..257693 + 366 115360527 - Bamb_5783 - AraC family transcriptional regulator 211 71.55 +1 257720..259213 - 497 115360528 - Bamb_5784 - periplasmic sensor signal transduction histidine kinase 212 68.75 0 259213..259932 - 239 115360529 - Bamb_5785 - two component transcriptional regulator 213 64.16 0 260229..261266 - 345 115360530 - Bamb_5786 - LysR family transcriptional regulator 214 68.82 0 261351..262094 - 247 115360531 - Bamb_5787 - NmrA family protein 215 69.82 0 262300..263790 + 496 115360532 - Bamb_5788 - GntR family transcriptional regulator 216 66.07 0 264080..264580 + 166 115360533 - Bamb_5789 - OsmC family protein 217 59.38 -1 264701..265702 + 333 115360534 - Bamb_5790 - membrane protein-like protein 218 64.09 0 265788..267341 - 517 115360535 - Bamb_5791 - EmrB/QacA family drug resistance transporter 219 62.86 0 267444..267758 - 104 115360536 - Bamb_5792 - hypothetical protein 220 66.87 0 267879..268379 + 166 115360537 - Bamb_5793 - OsmC family protein 221 60.62 -1 268559..269038 + 159 115360538 - Bamb_5794 - alkylhydroperoxidase 222 61.52 -1 269043..269450 + 135 115360539 - Bamb_5795 - cupin 2 domain-containing protein 223 60.98 -1 269762..270007 + 81 115360540 - Bamb_5796 - Zn-dependent alcohol dehydrogenases class III-like protein 224 63.54 0 270030..270605 + 191 115360541 - Bamb_5797 - glutathione-dependent formaldehyde-activating enzyme 225 57.35 -2 271510..271713 + 67 115360542 - Bamb_5798 - cold-shock DNA-binding domain-containing protein 226 65.51 0 271764..272108 + 114 115360543 - Bamb_5799 - hypothetical protein 66.16 MEAN 4.31 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.