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Burkholderia cepacia AMMD chromosome 3, complete sequence - 1..1281472 1013 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 97 66.67 0 110845..112266 - 473 115360414 - Bamb_5670 - permease for cytosine/purines, uracil, thiamine, allantoin 98 65.70 0 112614..113543 + 309 115360415 - Bamb_5671 - LysR family transcriptional regulator 99 68.38 0 113602..114765 - 387 115360416 - Bamb_5672 - acetylornithine deacetylase 100 72.57 +1 114758..115435 - 225 115360417 - Bamb_5673 - hypothetical protein 101 63.01 0 115444..115881 - 145 115360418 - Bamb_5674 - endoribonuclease L-PSP 102 69.14 0 116001..117413 - 470 115360419 - Bamb_5675 - flavin-containing monooxygenase FMO 103 58.65 -1 117576..117974 - 132 115360420 - Bamb_5676 - hypothetical protein 104 59.76 -1 117971..118216 - 81 115360421 - Bamb_5677 - AbrB family transcriptional regulator 105 61.48 -1 118367..119485 - 372 115360422 - Bamb_5678 - Sel1 domain-containing protein 106 61.54 -1 119939..120094 + 51 115360423 - Bamb_5679 - hypothetical protein 107 67.85 0 120304..121317 + 337 115360424 - Bamb_5680 - tryptophanyl-tRNA synthetase II 108 52.04 -2 121631..122095 + 154 115360425 - Bamb_5681 - hypothetical protein 109 58.12 -1 122095..122445 + 116 115360426 - Bamb_5682 - hypothetical protein 110 63.95 0 122503..123423 - 306 115360427 - Bamb_5683 - hypothetical protein 111 66.07 0 123524..124531 - 335 115360428 - Bamb_5684 - cytochrome d ubiquinol oxidase, subunit II 112 63.81 0 124535..125935 - 466 115360429 - Bamb_5685 - cytochrome bd ubiquinol oxidase, subunit I 113 72.39 +1 126354..127226 + 290 115360430 - Bamb_5686 - formate dehydrogenase family accessory protein FdhD 114 74.49 +1 127223..128437 + 404 115360431 - Bamb_5687 - molybdenum cofactor synthesis domain-containing protein 115 70.69 +1 128634..129752 + 372 115360432 - Bamb_5688 - molybdenum cofactor biosynthesis protein A 116 66.49 0 129800..130363 + 187 115360433 - Bamb_5689 - molybdopterin biosynthesis MoaE 117 63.95 0 130434..130691 + 85 115360434 - Bamb_5690 - thiamineS protein 118 63.20 0 130756..131418 - 220 115360435 - Bamb_5691 - glutathione S-transferase domain-containing protein 119 66.09 0 132016..134601 + 861 115360436 - Bamb_5692 - bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase 120 67.21 0 134727..135650 - 307 115360437 - Bamb_5693 - LysR family transcriptional regulator 121 64.89 0 135718..136335 + 205 115360438 - Bamb_5694 - lysine exporter protein LysE/YggA 122 63.91 0 136487..137611 + 374 115360439 - Bamb_5695 - transaminase 123 64.29 0 137649..139076 - 475 115360440 - Bamb_5696 - GntR family transcriptional regulator 124 71.81 +1 139394..141802 + 802 115360441 - Bamb_5697 - hypothetical protein 125 59.27 -1 141953..143776 + 607 115360442 - Bamb_5698 - ATPase 126 60.47 -1 143780..144424 + 214 115360443 - Bamb_5699 - organic radical activating enzyme family protein 127 62.15 0 144442..150756 + 2104 115360444 - Bamb_5700 - serine/threonine protein kinase 128 61.02 -1 150753..152099 + 448 115360445 - Bamb_5701 - hypothetical protein 129 55.45 -2 152170..152472 - 100 115360446 - Bamb_5702 - hypothetical protein 130 66.45 0 153331..154242 - 303 115360447 - Bamb_5703 - hypothetical protein 131 60.88 -1 154302..154664 - 120 115360448 - Bamb_5704 - TfoX domain-containing protein 132 72.48 +1 154704..156440 - 578 115360449 - Bamb_5705 - phage integrase family protein 133 67.85 0 156540..157805 - 421 115360450 - Bamb_5706 - major facilitator transporter 134 69.33 0 157821..158609 - 262 115360451 - Bamb_5707 - PpiC-type peptidyl-prolyl cis-trans isomerase 135 64.47 0 158619..159302 - 227 115360452 - Bamb_5708 - respiratory nitrate reductase, gamma subunit 136 71.51 +1 159327..160028 - 233 115360453 - Bamb_5709 - nitrate reductase molybdenum cofactor assembly chaperone 137 65.04 0 160025..161560 - 511 115360454 - Bamb_5710 - nitrate reductase, beta subunit 138 66.30 0 161557..165402 - 1281 115360455 - Bamb_5711 - nitrate reductase, alpha subunit 139 67.67 0 165755..166945 + 396 115360456 - Bamb_5712 - TPR repeat-containing protein 140 67.71 0 167052..167243 - 63 115360457 - Bamb_5713 - hypothetical protein 141 68.33 0 167258..167737 - 159 115360458 - Bamb_5714 - UspA domain-containing protein 142 70.60 +1 168002..168763 + 253 115360459 - Bamb_5715 - 2-keto-4-pentenoate hydratase-like protein 143 69.35 0 168794..169054 + 86 115360460 - Bamb_5716 - hypothetical protein 144 71.13 +1 169045..170457 + 470 115360461 - Bamb_5717 - hypothetical protein 145 68.95 0 170503..171555 - 350 115360462 - Bamb_5718 - AraC family transcriptional regulator 146 64.22 0 171703..172029 - 108 115360463 - Bamb_5719 - hypothetical protein 147 70.32 0 172061..173566 - 501 115360464 - Bamb_5720 - hypothetical protein 148 69.38 0 173969..176140 + 723 115360465 - Bamb_5721 - hypothetical protein 149 68.64 0 176148..176855 + 235 115360466 - Bamb_5722 - hypothetical protein 150 66.07 0 176937..177773 - 278 115360467 - Bamb_5723 - alpha/beta hydrolase fold 151 67.20 0 178019..178393 + 124 115360468 - Bamb_5724 - glyoxalase/bleomycin resistance protein/dioxygenase 152 68.71 0 178474..179307 - 277 115360469 - Bamb_5725 - short chain dehydrogenase 153 68.00 0 179402..180373 + 323 115360470 - Bamb_5726 - AraC family transcriptional regulator 154 67.52 0 180404..181576 - 390 115360471 - Bamb_5727 - aldose 1-epimerase 155 65.09 0 181755..183083 - 442 115360472 - Bamb_5728 - major facilitator transporter 156 67.88 0 183319..184224 + 301 115360473 - Bamb_5729 - 2-dehydropantoate 2-reductase 157 67.00 0 184645..185556 - 303 115360474 - Bamb_5730 - putative transmembrane anti-sigma factor 158 67.21 0 185559..186107 - 182 115360475 - Bamb_5731 - ECF subfamily RNA polymerase sigma-24 factor 159 65.48 0 186310..187155 - 281 115360476 - Bamb_5732 - abortive infection protein 160 68.82 0 187213..187629 - 138 115360477 - Bamb_5733 - OsmC family protein 161 65.85 0 187676..187921 - 81 115360478 - Bamb_5734 - hypothetical protein 162 60.18 -1 188247..188693 + 148 115360479 - Bamb_5735 - protein of unknown function DUF861, cupin_3 163 66.67 0 188784..190037 + 417 115360480 - Bamb_5736 - condensation domain-containing protein 164 68.01 0 190130..191323 - 397 115360481 - Bamb_5737 - major facilitator transporter 165 68.32 0 191496..191918 - 140 115360482 - Bamb_5738 - hypothetical protein 166 67.02 0 191941..192789 - 282 115360483 - Bamb_5739 - short-chain dehydrogenase/reductase SDR 167 68.08 0 193168..194298 - 376 115360484 - Bamb_5740 - periplasmic sensor signal transduction histidine kinase 168 67.97 0 194434..194817 - 127 115360485 - Bamb_5741 - response regulator receiver protein 169 63.64 0 195045..195704 - 219 115360486 - Bamb_5742 - two component LuxR family transcriptional regulator 170 69.28 0 195822..200879 - 1685 115360487 - Bamb_5743 - ATPase domain-containing protein 171 63.72 0 201242..201817 + 191 115360488 - Bamb_5744 - hypothetical protein 172 66.46 0 202015..202500 + 161 115360489 - Bamb_5745 - hypothetical protein 173 64.85 0 202577..203017 - 146 115360490 - Bamb_5746 - hypothetical protein 174 63.08 0 203114..203503 - 129 115360491 - Bamb_5747 - hypothetical protein 175 67.23 0 203742..205154 - 470 115360492 - Bamb_5748 - GAF sensor signal transduction histidine kinase 176 59.88 -1 205487..206164 + 225 115360493 - Bamb_5749 - TetR family transcriptional regulator 177 72.16 +1 206222..207076 + 284 115360494 - Bamb_5750 - molybdopterin dehydrogenase, FAD-binding 178 69.32 0 207057..209879 + 940 115360495 - Bamb_5751 - aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding 179 64.55 0 209907..211184 + 425 115360496 - Bamb_5752 - major facilitator transporter 180 66.67 0 211225..212004 - 259 115360497 - Bamb_5753 - GCN5-related N-acetyltransferase 181 67.46 0 212154..215663 - 1169 115360498 - Bamb_5754 - pyruvate carboxylase 182 64.37 0 216021..217022 - 333 115360499 - Bamb_5755 - LysR family transcriptional regulator 183 67.80 0 217440..218933 - 497 115360500 - Bamb_5756 - betaine-aldehyde dehydrogenase 184 68.09 0 218950..220281 - 443 115360501 - Bamb_5757 - FAD dependent oxidoreductase 185 66.10 0 220288..221175 - 295 115360502 - Bamb_5758 - dihydrodipicolinate synthetase 186 68.21 0 221335..222630 - 431 115360503 - Bamb_5759 - glycine hydroxymethyltransferase 187 63.38 0 222753..223634 - 293 115360504 - Bamb_5760 - substrate-binding region of ABC-type glycine betaine transport system 188 66.33 0 223785..224672 - 295 115360505 - Bamb_5761 - binding-protein-dependent transport systems inner membrane component 189 65.66 0 224669..225958 - 429 115360506 - Bamb_5762 - glycine betaine/L-proline ABC transporter, ATPase subunit 190 65.58 0 227216..228871 + 551 115360507 - Bamb_5763 - AMP-dependent synthetase and ligase 191 67.12 0 228868..229755 + 295 115360508 - Bamb_5764 - hypothetical protein 192 67.38 0 229755..230870 + 371 115360509 - Bamb_5765 - 3-oxoacyl-(acyl-carrier-protein) synthase 193 67.57 0 230867..231865 + 332 115360510 - Bamb_5766 - 3-oxoacyl-(acyl carrier protein) synthase III 194 64.44 0 231871..232767 + 298 115360511 - Bamb_5767 - beta-lactamase domain-containing protein 195 66.62 0 232797..236675 + 1292 115360512 - Bamb_5768 - AMP-dependent synthetase and ligase 196 65.87 0 236687..238825 + 712 115360513 - Bamb_5769 - hypothetical protein 66.16 MEAN 4.31 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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