version 1.0
Burkholderia cepacia AMMD chromosome 2, complete sequence - 1..2646969 2346 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 922 69.30 0 1062930..1064069 + 379 115358892 - Bamb_4143 - patatin 923 66.38 0 1064118..1064822 - 234 115358893 - Bamb_4144 - short-chain dehydrogenase/reductase SDR 924 67.22 0 1064944..1065843 + 299 115358894 - Bamb_4145 - LysR family transcriptional regulator 925 64.23 0 1065932..1066873 - 313 115358895 - Bamb_4146 - LysR family transcriptional regulator 926 65.41 0 1066961..1068232 + 423 115358896 - Bamb_4147 - major facilitator transporter 927 64.77 0 1068297..1069190 + 297 115358897 - Bamb_4148 - amidohydrolase 2 928 67.31 0 1069378..1069686 + 102 115358898 - Bamb_4149 - ArsR family transcriptional regulator 929 69.30 0 1069759..1070820 + 353 115358899 - Bamb_4150 - NADH:flavin oxidoreductase/NADH oxidase 930 67.56 0 1070836..1071396 - 186 115358900 - Bamb_4151 - GCN5-related N-acetyltransferase 931 70.26 0 1071447..1072058 + 203 115358901 - Bamb_4152 - lysine exporter protein LysE/YggA 932 65.97 0 1072155..1072583 - 142 115358902 - Bamb_4153 - hypothetical protein 933 69.06 0 1072853..1073773 - 306 115358903 - Bamb_4154 - phosphatidylinositol diacylglycerol-lyase 934 69.99 0 1073780..1074802 + 340 115358904 - Bamb_4155 - LacI family transcription regulator 935 69.45 0 1074812..1075672 - 286 115358905 - Bamb_4156 - binding-protein-dependent transport systems inner membrane component 936 68.62 0 1075669..1076538 - 289 115358906 - Bamb_4157 - binding-protein-dependent transport systems inner membrane component 937 69.28 0 1076573..1077913 - 446 115358907 - Bamb_4158 - extracellular solute-binding protein 938 68.62 0 1077976..1079205 - 409 115358908 - Bamb_4159 - porin 939 68.90 0 1079356..1080294 - 312 115358909 - Bamb_4160 - AraC family transcriptional regulator 940 75.30 +2 1080355..1080945 - 196 115358910 - Bamb_4161 - hypothetical protein 941 69.13 0 1080942..1082444 - 500 115358911 - Bamb_4162 - amino acid permease-associated region 942 67.11 0 1082718..1084058 - 446 115358912 - Bamb_4163 - hypothetical protein 943 69.33 0 1084131..1085633 - 500 115358913 - Bamb_4164 - betaine-aldehyde dehydrogenase 944 64.10 0 1086055..1086717 - 220 115358914 - Bamb_4165 - hypothetical protein 945 68.17 0 1086769..1087500 - 243 115358915 - Bamb_4166 - LuxR family transcriptional regulator 946 67.47 0 1087658..1088533 - 291 115358916 - Bamb_4167 - protein of unknown function, zinc metallopeptidase putative 947 65.17 0 1088627..1088893 + 88 115358917 - Bamb_4168 - hypothetical protein 948 74.12 +1 1088974..1089765 + 263 115358918 - Bamb_4169 - short-chain dehydrogenase/reductase SDR 949 70.38 0 1089971..1091020 + 349 115358919 - Bamb_4170 - LysR family transcriptional regulator 950 71.83 +1 1091120..1091797 + 225 115358920 - Bamb_4171 - hypothetical protein 951 70.45 0 1091886..1093205 + 439 115358921 - Bamb_4172 - major facilitator transporter 952 69.23 0 1093255..1093956 + 233 115358922 - Bamb_4173 - hypothetical protein 953 72.17 +1 1094033..1095013 - 326 115358923 - Bamb_4174 - NAD-dependent epimerase/dehydratase 954 71.33 +1 1095113..1096012 + 299 115358924 - Bamb_4175 - LysR family transcriptional regulator 955 71.94 +1 1096050..1096922 - 290 115358925 - Bamb_4176 - LysR family transcriptional regulator 956 72.07 +1 1097079..1098539 + 486 115358926 - Bamb_4177 - major facilitator transporter 957 64.72 0 1098937..1099347 + 136 115358927 - Bamb_4178 - endoribonuclease L-PSP 958 71.43 +1 1099380..1100093 - 237 115358928 - Bamb_4179 - short chain dehydrogenase 959 64.14 0 1100406..1101116 + 236 115358929 - Bamb_4180 - hypothetical protein 960 71.85 +1 1101207..1102016 - 269 115358930 - Bamb_4181 - 3-ketoacyl-(acyl-carrier-protein) reductase 961 67.99 0 1102013..1102846 - 277 115358931 - Bamb_4182 - hypothetical protein 962 71.45 +1 1103017..1103811 + 264 115358932 - Bamb_4183 - AraC family transcriptional regulator 963 72.60 +1 1104171..1105130 + 319 115358933 - Bamb_4184 - hypothetical protein 964 64.57 0 1105256..1105828 + 190 115358934 - Bamb_4185 - hypothetical protein 965 61.48 -1 1105928..1106062 - 44 115358935 - Bamb_4186 - entericidin EcnAB 966 64.89 0 1106298..1107593 + 431 115358936 - Bamb_4187 - aspartate carbamoyltransferase 967 65.48 0 1107730..1108149 - 139 115358937 - Bamb_4188 - PilT domain-containing protein 968 63.41 0 1108146..1108421 - 91 115358938 - Bamb_4189 - plasmid stability protein-like protein 969 65.55 0 1108706..1110949 + 747 115358939 - Bamb_4190 - TonB-dependent siderophore receptor 970 71.16 +1 1110953..1111708 + 251 115358940 - Bamb_4191 - Sel1 domain-containing protein 971 63.60 0 1111705..1112388 + 227 115358941 - Bamb_4192 - putative hydroxylase 972 61.67 -1 1112488..1112727 + 79 115358942 - Bamb_4193 - hypothetical protein 973 67.42 0 1112724..1113119 + 131 115358943 - Bamb_4194 - PilT domain-containing protein 974 71.28 +1 1113489..1114073 + 194 115358944 - Bamb_4195 - MobA-like protein-like protein 975 69.30 0 1114536..1115294 - 252 115358945 - Bamb_4196 - short chain dehydrogenase 976 69.51 0 1115291..1116838 - 515 115358946 - Bamb_4197 - xylulokinase 977 65.93 0 1116870..1117958 - 362 115358947 - Bamb_4198 - alcohol dehydrogenase 978 66.37 0 1118008..1119021 - 337 115358948 - Bamb_4199 - inner-membrane translocator 979 67.04 0 1119008..1120594 - 528 115358949 - Bamb_4200 - ABC transporter related 980 67.19 0 1120591..1121544 - 317 115358950 - Bamb_4201 - periplasmic binding protein/LacI transcriptional regulator 981 67.40 0 1121661..1122620 - 319 115358951 - Bamb_4202 - AraC family transcriptional regulator 982 71.52 +1 1122871..1123818 - 315 115358952 - Bamb_4203 - 2-dehydropantoate 2-reductase 983 67.25 0 1124075..1125628 + 517 115358953 - Bamb_4204 - methyl-accepting chemotaxis sensory transducer 984 66.67 0 1125904..1126581 - 225 115358954 - Bamb_4205 - two component LuxR family transcriptional regulator 985 66.26 0 1126942..1127433 + 163 115358955 - Bamb_4206 - hypothetical protein 986 68.27 0 1127803..1129236 - 477 115358956 - Bamb_4207 - sigma-54 dependent trancsriptional regulator 987 60.82 -1 1129605..1130117 + 170 115358957 - Bamb_4208 - hypothetical protein 988 68.72 0 1130185..1131111 - 308 115358958 - Bamb_4209 - AraC family transcriptional regulator 989 68.83 0 1131293..1131754 + 153 115358959 - Bamb_4210 - 2Fe-2S iron-sulfur cluster binding domain-containing protein 990 70.51 0 1131757..1133967 + 736 115358960 - Bamb_4211 - aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding 991 59.84 -1 1134076..1135350 - 424 115358961 - Bamb_4212 - filamentation induced by cAMP protein Fic 992 61.40 -1 1135718..1136116 + 132 115358962 - Bamb_4213 - response regulator receiver protein 993 74.52 +1 1136505..1137650 + 381 115358963 - Bamb_4214 - type III secretion system apparatus protein YscQ/HrcQ 994 65.48 0 1137654..1138328 + 224 115358964 - Bamb_4215 - type III secretion system protein 995 72.01 +1 1138325..1139128 + 267 115358965 - Bamb_4216 - lytic transglycosylase, catalytic 996 70.12 0 1139201..1141168 - 655 115358966 - Bamb_4217 - asparagine synthase (glutamine-hydrolyzing) 997 60.08 -1 1141178..1141435 - 85 115358967 - Bamb_4218 - hypothetical protein 998 67.73 0 1141414..1142445 - 343 115358968 - Bamb_4219 - type III secretion exporter 999 67.28 0 1142470..1143279 - 269 115358969 - Bamb_4220 - type III secretion protein SpaR/YscT/HrcT 1000 74.30 +1 1143273..1143953 - 226 115358970 - Bamb_4221 - hypothetical protein 1001 69.84 0 1143946..1145331 - 461 115358971 - Bamb_4222 - type III secretion apparatus H+-transporting two-sector ATPase 1002 70.00 0 1145328..1145957 - 209 115358972 - Bamb_4223 - HrpE/YscL family type III secretion apparatus protein 1003 72.20 +1 1145939..1146679 - 246 115358973 - Bamb_4224 - hypothetical protein 1004 71.94 +1 1146676..1147605 - 309 115358974 - Bamb_4225 - YscJ/HrcJ family type III secretion apparatus lipoprotein 1005 68.55 0 1147684..1148214 - 176 115358975 - Bamb_4226 - hypothetical protein 1006 72.99 +1 1148661..1150019 - 452 115358976 - Bamb_4227 - YscD/HrpQ family type III secretion apparatus protein 1007 67.45 0 1150000..1152045 - 681 115358977 - Bamb_4228 - YscC/HrcC family type III secretion outer membrane protein 1008 65.23 0 1152045..1152323 - 92 115358978 - Bamb_4229 - HrpO family type III secretion protein 1009 69.73 0 1152320..1154569 - 749 115358979 - Bamb_4230 - type III secretion FHIPEP protein 1010 64.63 0 1154763..1155596 - 277 115358980 - Bamb_4231 - LuxR family transcriptional regulator 1011 66.67 0 1155876..1156781 + 301 115358981 - Bamb_4232 - LuxR family transcriptional regulator 1012 67.09 0 1156860..1158506 - 548 115358982 - Bamb_4233 - natural resistance-associated macrophage protein 1013 66.32 0 1158545..1158832 + 95 115358983 - Bamb_4234 - hypothetical protein 1014 71.06 +1 1159810..1160082 + 90 115358984 - Bamb_4235 - hypothetical protein 1015 69.57 0 1160194..1161672 + 492 115358985 - Bamb_4236 - carbohydrate-selective porin OprB 1016 68.32 0 1161766..1163520 - 584 115358986 - Bamb_4237 - Alpha,alpha-trehalase 1017 67.66 0 1163813..1165228 + 471 115358987 - Bamb_4238 - major facilitator transporter 1018 68.56 0 1165577..1166788 + 403 115358988 - Bamb_4239 - hypothetical protein 1019 61.64 -1 1166891..1167109 - 72 115358989 - Bamb_4240 - hypothetical protein 1020 66.44 0 1167165..1167608 - 147 115358990 - Bamb_4241 - GCN5-related N-acetyltransferase 1021 67.44 0 1167736..1168380 + 214 115358991 - Bamb_4242 - hydrolase 66.96 MEAN 4.07 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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