version 1.0
Burkholderia cepacia AMMD chromosome 2, complete sequence - 1..2646969 2346 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 29 64.63 0 30012..30305 + 97 115357999 - Bamb_3248 - exodeoxyribonuclease VII small subunit 30 69.04 0 30302..31186 + 294 115358000 - Bamb_3249 - polyprenyl synthetase 31 66.20 0 31232..33172 + 646 115358001 - Bamb_3250 - 1-deoxy-D-xylulose-5-phosphate synthase 32 64.69 0 33327..34136 + 269 115358002 - Bamb_3251 - putative GTP cyclohydrolase 33 69.45 0 34237..35277 - 346 115358003 - Bamb_3252 - O-sialoglycoprotein endopeptidase 34 69.62 0 35409..36626 + 405 115358004 - Bamb_3253 - hypothetical protein 35 55.87 -2 36732..36944 + 70 115358005 rpsU Bamb_3254 - 30S ribosomal protein S21 36 65.32 0 37131..37577 + 148 115358006 - Bamb_3255 - GatB/Yqey domain-containing protein 37 65.76 0 37642..39510 + 622 115358007 dnaG Bamb_3256 - DNA primase 38 62.82 -1 39599..42016 + 805 115358008 - Bamb_3257 - RNA polymerase sigma factor RpoD 39 60.73 -1 42358..43149 - 263 115358009 - Bamb_3258 - carboxymuconolactone decarboxylase 40 62.70 -1 43127..43630 - 167 115358010 - Bamb_3259 - cupin 2 domain-containing protein 41 62.50 -1 43648..44415 - 255 115358011 - Bamb_3260 - short-chain dehydrogenase/reductase SDR 42 63.87 0 45193..45942 - 249 115358012 - Bamb_3261 - creatininase 43 64.57 0 45955..47241 - 428 115358013 - Bamb_3262 - major facilitator transporter 44 65.91 0 47412..48335 + 307 115358014 - Bamb_3263 - LysR family transcriptional regulator 45 64.75 0 48569..49561 + 330 115358015 - Bamb_3264 - hypothetical protein 46 57.17 -2 49604..50224 - 206 115358016 - Bamb_3265 - TetR family transcriptional regulator 47 63.80 0 50440..52635 + 731 115358017 - Bamb_3266 - Beta-glucosidase 48 62.58 -1 52783..54030 + 415 115358018 - Bamb_3267 - major facilitator transporter 49 63.37 0 54062..55549 + 495 115358019 - Bamb_3268 - sulfatase 50 61.58 -1 55728..56750 + 340 115358020 - Bamb_3269 - porin 51 65.48 0 56763..57182 + 139 115358021 - Bamb_3270 - transport-associated 52 61.18 -1 57216..58838 + 540 115358022 - Bamb_3271 - sulfatase 53 65.79 0 59028..60632 - 534 115358023 - Bamb_3272 - peptidase S8 and S53, subtilisin, kexin, sedolisin 54 63.14 0 60697..61320 - 207 115358024 - Bamb_3273 - hypothetical protein 55 70.56 0 61569..63056 - 495 115358025 - Bamb_3274 - RND efflux system outer membrane lipoprotein 56 67.55 0 63070..64656 - 528 115358026 - Bamb_3275 - EmrB/QacA family drug resistance transporter 57 71.22 +1 64649..65767 - 372 115358027 - Bamb_3276 - secretion protein HlyD family protein 58 69.08 0 65860..66687 + 275 115358028 - Bamb_3277 - TetR family transcriptional regulator 59 70.02 0 66701..69295 - 864 115358029 - Bamb_3278 - MscS mechanosensitive ion channel 60 70.39 0 69333..70298 - 321 115358030 - Bamb_3279 - luciferase family protein 61 67.65 0 70347..70652 - 101 115358031 - Bamb_3280 - hypothetical protein 62 62.80 -1 70649..71062 - 137 115358032 - Bamb_3281 - hypothetical protein 63 65.22 0 71189..71395 + 68 115358033 - Bamb_3282 - hypothetical protein 64 70.90 0 71392..72288 + 298 115358034 - Bamb_3283 - NAD-dependent deacetylase 65 72.74 +1 72285..72926 + 213 115358035 - Bamb_3284 - hypothetical protein 66 66.17 0 73024..74436 + 470 115358036 - Bamb_3285 - 6-phosphogluconate dehydrogenase 67 66.38 0 74635..74979 + 114 115358037 - Bamb_3286 - hypothetical protein 68 70.09 0 75091..75411 - 106 115358038 - Bamb_3287 - hypothetical protein 69 72.27 +1 75826..76557 + 243 115358039 - Bamb_3288 - peptidase M23B 70 65.26 0 76606..77316 - 236 115358040 - Bamb_3289 - hypothetical protein 71 62.94 0 77476..78012 + 178 115358041 - Bamb_3290 - cytochrome B561 72 71.00 0 78169..78537 + 122 115358042 - Bamb_3291 - hypothetical protein 73 68.83 0 78621..80750 + 709 115358043 - Bamb_3292 - TonB-dependent copper receptor 74 66.85 0 80980..82074 + 364 115358044 - Bamb_3293 - triacylglycerol lipase 75 74.30 +1 82078..83112 + 344 115358045 - Bamb_3294 - lipase chaperone 76 69.55 0 83152..84675 - 507 115358046 - Bamb_3295 - GntR family transcriptional regulator 77 66.39 0 84784..85878 + 364 115358047 - Bamb_3296 - spermidine/putrescine ABC transporter ATPase subunit 78 64.47 0 85956..87002 + 348 115358048 - Bamb_3297 - extracellular solute-binding protein 79 68.17 0 87105..88367 + 420 115358049 - Bamb_3298 - binding-protein-dependent transport systems inner membrane component 80 67.50 0 88405..89241 + 278 115358050 - Bamb_3299 - binding-protein-dependent transport systems inner membrane component 81 71.95 +1 89371..90864 + 497 115358051 - Bamb_3300 - major facilitator transporter 82 67.59 0 90937..92676 - 579 115358052 - Bamb_3301 - peptidase S8 and S53, subtilisin, kexin, sedolisin 83 65.12 0 93377..93700 + 107 115358053 - Bamb_3302 - ArsR family transcriptional regulator 84 65.05 0 93697..94128 + 143 115358054 - Bamb_3303 - activator of Hsp90 ATPase 1 family protein 85 68.71 0 94125..94565 + 146 115358055 - Bamb_3304 - hypothetical protein 86 64.42 0 94709..97426 - 905 115358056 acnA Bamb_3305 - aconitate hydratase 87 67.01 0 97479..98930 - 483 115358057 prpD Bamb_3306 - 2-methylcitrate dehydratase 88 65.88 0 98962..99471 - 169 115358058 - Bamb_3307 - hypothetical protein 89 72.14 +1 99695..100699 - 334 115358059 - Bamb_3308 - HpcH/HpaI aldolase 90 65.65 0 100886..101872 - 328 115358060 - Bamb_3309 - malate dehydrogenase 91 66.79 0 102161..102985 + 274 115358061 - Bamb_3310 - GntR family transcriptional regulator 92 58.27 -2 103155..103571 + 138 115358062 - Bamb_3311 - succinate dehydrogenase, cytochrome b subunit 93 62.33 -1 103576..103944 + 122 115358063 - Bamb_3312 - succinate dehydrogenase, cytochrome b subunit 94 65.32 0 103948..105723 + 591 115358064 sdhA Bamb_3313 - succinate dehydrogenase flavoprotein subunit 95 62.54 -1 105745..106446 + 233 115358065 sdhB Bamb_3314 - succinate dehydrogenase iron-sulfur subunit 96 60.81 -1 106453..106725 + 90 115358066 - Bamb_3315 - hypothetical protein 97 60.75 -1 106792..108093 + 433 115358067 gltA Bamb_3316 - type II citrate synthase 98 72.76 +1 108183..109166 - 327 115358068 - Bamb_3317 - AraC family transcriptional regulator 99 68.21 0 109238..109627 + 129 115358069 - Bamb_3318 - glyoxalase/bleomycin resistance protein/dioxygenase 100 70.10 0 109739..110992 + 417 115358070 - Bamb_3319 - hypothetical protein 101 69.13 0 111217..111987 + 256 115358071 - Bamb_3320 - dimethylargininase 102 64.09 0 112089..112553 + 154 115358072 - Bamb_3321 - AsnC family transcriptional regulator 103 66.54 0 112694..114229 + 511 115358073 - Bamb_3322 - amino acid permease-associated region 104 65.43 0 114431..115156 - 241 115358074 - Bamb_3323 - glutathione S-transferase domain-containing protein 105 67.57 0 115284..115616 - 110 115358075 - Bamb_3324 - cupin 2 domain-containing protein 106 58.83 -1 115836..116882 - 348 115358076 - Bamb_3325 - hypothetical protein 107 57.66 -2 117318..118172 - 284 115358077 - Bamb_3326 - xylose isomerase domain-containing protein 108 59.01 -1 118514..119479 + 321 115358078 - Bamb_3327 - periplasmic binding protein/LacI transcriptional regulator 109 61.02 -1 119611..120690 + 359 115358079 - Bamb_3328 - oxidoreductase domain-containing protein 110 59.60 -1 121149..122732 + 527 115358080 - Bamb_3329 - ABC transporter related 111 61.33 -1 122725..123735 + 336 115358081 - Bamb_3330 - inner-membrane translocator 112 59.08 -1 123750..124724 + 324 115358082 - Bamb_3331 - inner-membrane translocator 113 58.01 -2 124976..125899 - 307 115358083 - Bamb_3332 - LysR family transcriptional regulator 114 58.73 -2 126199..127080 + 293 115358084 - Bamb_3333 - catechol 1,2-dioxygenase 115 55.56 -2 127077..127427 + 116 115358085 - Bamb_3334 - stress responsive alpha-beta barrel domain-containing protein 116 62.67 -1 127414..128490 + 358 115358086 - Bamb_3335 - iron-containing alcohol dehydrogenase 117 53.68 -2 128535..128819 + 94 115358087 - Bamb_3336 - YciI-like protein 118 60.57 -1 128973..129776 + 267 115358088 - Bamb_3337 - short-chain dehydrogenase/reductase SDR 119 60.22 -1 130208..131200 + 330 115358089 - Bamb_3338 - inositol 2-dehydrogenase 120 59.74 -1 131309..132217 + 302 115358090 - Bamb_3339 - LysR family transcriptional regulator 121 66.45 0 132441..133850 + 469 115358091 - Bamb_3340 - isopropylmalate isomerase large subunit 122 72.11 +1 133854..134000 + 48 115358092 - Bamb_3341 - entericidin EcnAB 123 63.44 0 134066..134716 + 216 115358093 leuD Bamb_3342 - isopropylmalate isomerase small subunit 124 66.39 0 134792..135859 + 355 115358094 - Bamb_3343 - 3-isopropylmalate dehydrogenase 125 64.35 0 136181..137302 + 373 115358095 - Bamb_3344 - aspartate-semialdehyde dehydrogenase 126 73.53 +1 137569..139653 + 694 115358096 - Bamb_3345 - hypothetical protein 127 68.51 0 139653..140465 + 270 115358097 truA Bamb_3346 - tRNA pseudouridine synthase A 128 69.09 0 140462..141163 + 233 115358098 - Bamb_3347 - N-(5'-phosphoribosyl)anthranilate isomerase 66.96 MEAN 4.07 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.