version 1.0
Burkholderia cepacia AMMD chromosome 2, complete sequence - 1..2646969 2346 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 670 66.54 0 782762..783547 - 261 115358640 - Bamb_3890 - AraC family transcriptional regulator 671 68.66 0 783795..786107 + 770 115358641 - Bamb_3891 - molybdopterin oxidoreductase 672 64.37 0 786132..786479 - 115 115358642 - Bamb_3892 - RND family efflux transporter MFP subunit 673 67.80 0 786520..787311 - 263 115358643 - Bamb_3893 - metal-binding integral membrane protein-like protein 674 61.86 -1 787308..787952 - 214 115358644 - Bamb_3894 - hypothetical protein 675 68.43 0 788143..789387 + 414 115358645 - Bamb_3895 - major facilitator transporter 676 60.13 -1 789411..789716 - 101 115358646 - Bamb_3896 - hypothetical protein 677 68.36 0 789935..790465 - 176 115358647 - Bamb_3897 - carbonic anhydrase 678 67.99 0 790469..790921 - 150 115358648 - Bamb_3898 - electron transfer flavoprotein, alpha subunit 679 60.23 -1 791139..791402 - 87 115358649 - Bamb_3899 - translation initiation factor IF-1 680 57.35 -2 791862..792065 - 67 115358650 - Bamb_3900 - cold-shock DNA-binding domain-containing protein 681 68.25 0 792405..792656 - 83 115358651 - Bamb_3901 - hypothetical protein 682 64.48 0 792869..793279 - 136 115358652 - Bamb_3902 - PilT domain-containing protein 683 61.60 -1 793272..793508 - 78 115358653 - Bamb_3903 - hypothetical protein 684 68.80 0 793755..794927 - 390 115358654 - Bamb_3904 - hypothetical protein 685 66.29 0 795337..796410 + 357 115358655 - Bamb_3905 - acyltransferase 3 686 64.14 0 796423..796659 - 78 115358656 - Bamb_3906 - hypothetical protein 687 71.26 +1 797135..798004 - 289 115358657 - Bamb_3907 - LysR family transcriptional regulator 688 69.55 0 798145..799533 + 462 115358658 - Bamb_3908 - major facilitator transporter 689 69.57 0 799559..799903 - 114 115358659 - Bamb_3909 - hypothetical protein 690 72.15 +1 800044..800262 - 72 115358660 - Bamb_3910 - hypothetical protein 691 61.06 -1 800382..801434 + 350 115358661 - Bamb_3911 - IS605 family transposase OrfB 692 71.48 +1 801491..802654 - 387 115358662 - Bamb_3912 - hypothetical protein 693 71.25 +1 802657..804051 - 464 115358663 - Bamb_3913 - hypothetical protein 694 64.30 0 804256..805101 - 281 115358664 - Bamb_3914 - GCN5-related N-acetyltransferase 695 66.07 0 805329..805832 - 167 115358665 - Bamb_3915 - integral membrane protein 696 71.67 +1 805829..806248 - 139 115358666 - Bamb_3916 - hypothetical protein 697 69.99 0 806245..806997 - 250 115358667 - Bamb_3917 - RNA polymerase sigma factor 698 64.91 0 807032..807145 - 37 115358668 - Bamb_3918 - hypothetical protein 699 69.33 0 807215..807514 - 99 115358669 - Bamb_3919 - hypothetical protein 700 68.39 0 807727..809526 + 599 115358670 - Bamb_3920 - metallophosphoesterase 701 67.46 0 809639..810271 - 210 115358671 - Bamb_3921 - lysine exporter protein LysE/YggA 702 67.89 0 810401..811297 - 298 115358672 - Bamb_3922 - LysR family transcriptional regulator 703 68.60 0 811603..811860 + 85 115358673 - Bamb_3923 - hypothetical protein 704 66.00 0 812138..812437 + 99 115358674 - Bamb_3924 - hypothetical protein 705 67.45 0 812539..814323 - 594 115358675 - Bamb_3925 - diguanylate cyclase 706 65.78 0 814320..815444 - 374 115358676 - Bamb_3926 - extracellular solute-binding protein 707 69.04 0 815948..817381 + 477 115358677 - Bamb_3927 - GntR family transcriptional regulator 708 70.40 0 817478..817879 + 133 115358678 - Bamb_3928 - hypothetical protein 709 69.02 0 818074..819858 + 594 115358679 - Bamb_3929 - nitrite/sulfite reductase hemoprotein beta subunit 710 67.75 0 819855..820316 + 153 115358680 - Bamb_3930 - hypothetical protein 711 70.10 0 820390..821670 - 426 115358681 - Bamb_3931 - virulence factor family protein 712 70.33 0 821667..824261 - 864 115358682 - Bamb_3932 - hypothetical protein 713 67.82 0 824621..825055 - 144 115358683 - Bamb_3933 - hypothetical protein 714 70.60 0 825164..829357 - 1397 115358684 - Bamb_3934 - molybdopterin oxidoreductase 715 66.67 0 829374..829721 - 115 115358685 - Bamb_3935 - nitrite reductase (NAD(P)H), small subunit 716 67.97 0 829760..832363 - 867 115358686 - Bamb_3936 - nitrite reductase (NAD(P)H), large subunit 717 68.70 0 832384..833709 - 441 115358687 - Bamb_3937 - major facilitator transporter 718 68.23 0 833861..834052 - 63 115358688 - Bamb_3938 - hypothetical protein 719 73.36 +1 834304..835155 + 283 115358689 - Bamb_3939 - uroporphyrin-III C-methyltransferase 720 68.51 0 835321..835917 + 198 115358690 - Bamb_3940 - response regulator receiver/ANTAR domain-containing protein 721 73.18 +1 835923..836966 + 347 115358691 - Bamb_3941 - ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein 722 72.67 +1 837134..837733 + 199 115358692 - Bamb_3942 - uracil-DNA glycosylase superfamily protein 723 69.82 0 837766..838557 + 263 115358693 - Bamb_3943 - hypothetical protein 724 71.44 +1 838684..839625 + 313 115358694 - Bamb_3944 - AraC family transcriptional regulator 725 69.81 0 839755..840453 + 232 115358695 - Bamb_3945 - fumarylacetoacetate (FAA) hydrolase 726 69.62 0 840572..841858 - 428 115358696 - Bamb_3946 - major facilitator transporter 727 72.39 +1 842010..843635 - 541 115358697 - Bamb_3947 - peptidase S1 and S6, chymotrypsin/Hap 728 69.52 0 843896..844771 - 291 115358698 - Bamb_3948 - LysR family transcriptional regulator 729 68.58 0 844921..846174 + 417 115358699 - Bamb_3949 - major facilitator transporter 730 72.87 +1 846367..847914 - 515 115358700 - Bamb_3950 - GntR family transcriptional regulator 731 70.13 0 848204..849445 + 413 115358701 - Bamb_3951 - GCN5-related N-acetyltransferase 732 71.30 +1 849468..849920 - 150 115358702 - Bamb_3952 - hypothetical protein 733 67.51 0 850415..851479 + 354 115358703 - Bamb_3953 - alcohol dehydrogenase 734 68.95 0 851745..852401 + 218 115358704 - Bamb_3954 - hypothetical protein 735 71.22 +1 852467..853345 + 292 115358705 - Bamb_3955 - abortive infection protein 736 67.07 0 853388..854368 - 326 115358706 - Bamb_3956 - aldo/keto reductase 737 65.29 0 854623..855348 - 241 115358707 - Bamb_3957 - multiple antibiotic resistance (MarC)-related proteins 738 71.79 +1 855425..856225 - 266 115358708 - Bamb_3958 - enoyl-CoA hydratase/isomerase 739 69.09 0 856266..857588 - 440 115358709 - Bamb_3959 - phenylacetate-CoA ligase 740 72.27 +1 857648..859201 - 517 115358710 - Bamb_3960 - 3-hydroxybutyryl-CoA dehydrogenase 741 68.69 0 859738..860826 + 362 115358711 - Bamb_3961 - sodium/calcium exchanger membrane region 742 69.64 0 860937..861845 - 302 115358712 - Bamb_3962 - LysR family transcriptional regulator 743 72.95 +1 861946..862311 + 121 115358713 - Bamb_3963 - hypothetical protein 744 67.18 0 862271..863239 - 322 115358714 - Bamb_3964 - LysR family transcriptional regulator 745 72.19 +1 863604..864779 + 391 115358715 - Bamb_3965 - CBS domain-containing protein 746 62.96 0 864851..865309 + 152 115358716 - Bamb_3966 - MarR family transcriptional regulator 747 68.96 0 865340..867127 + 595 115358717 - Bamb_3967 - Cl- channel, voltage-gated family protein 748 63.61 0 867615..867941 + 108 115358718 - Bamb_3968 - hypothetical protein 749 61.99 -1 868053..868373 - 106 115358719 - Bamb_3969 - hypothetical protein 750 69.32 0 868551..869453 - 300 115358720 - Bamb_3970 - LysR family transcriptional regulator 751 68.78 0 869636..870820 + 394 115358721 - Bamb_3971 - amidohydrolase 752 68.70 0 870864..872189 + 441 115358722 - Bamb_3972 - major facilitator transporter 753 57.76 -2 872368..873063 - 231 115358723 - Bamb_3973 - hypothetical protein 754 53.05 -2 873476..876757 - 1093 115358724 - Bamb_3974 - type III restriction enzyme, res subunit 755 63.60 0 877310..878419 - 369 115358725 - Bamb_3975 - porin 756 62.86 -1 878477..879001 - 174 115358726 - Bamb_3976 - DoxX family protein 757 67.84 0 879084..880361 - 425 115358727 - Bamb_3977 - cytochrome c, class I 758 65.19 0 880364..881983 - 539 115358728 - Bamb_3978 - glucose-methanol-choline oxidoreductase 759 62.72 -1 881983..882489 - 168 115358729 - Bamb_3979 - hypothetical protein 760 69.98 0 882798..888839 + 2013 115358730 - Bamb_3980 - alpha-2-macroglobulin domain-containing protein 761 72.16 +1 888847..891084 + 745 115358731 - Bamb_3981 - penicillin-binding protein 1C 762 68.98 0 891266..891958 + 230 115358732 - Bamb_3982 - hypothetical protein 763 66.59 0 891994..893241 - 415 115358733 - Bamb_3983 - major facilitator transporter 764 70.00 0 893598..894137 + 179 115358734 - Bamb_3984 - hypothetical protein 765 66.43 0 894431..895291 + 286 115358735 - Bamb_3985 - hypothetical protein 766 64.89 0 895377..896051 + 224 115358736 - Bamb_3986 - GntR family transcriptional regulator 767 62.16 -1 896116..896514 - 132 115358737 ectC Bamb_3987 - L-ectoine synthase 768 72.26 +1 896581..897921 - 446 115358738 - Bamb_3988 - amidase 769 65.00 0 897945..899447 - 500 115358739 - Bamb_3989 - polar amino acid ABC transporter, inner membrane subunit 66.96 MEAN 4.07 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0