version 1.0
Burkholderia cepacia AMMD chromosome 2, complete sequence - 1..2646969 2346 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3 70.13 0 2281..3204 - 307 115357973 - Bamb_3221 - hypothetical protein 4 72.56 +1 3244..4143 - 299 115357974 - Bamb_3222 - LysR family transcriptional regulator 5 62.76 -1 4212..4595 + 127 115357975 - Bamb_3223 - 4-oxalocrotonate tautomerase 6 71.88 +1 4722..6353 + 543 115357976 - Bamb_3224 - CHAD domain-containing protein 7 71.19 +1 6402..7241 + 279 115357977 - Bamb_3225 - ModE family transcriptional regulator 8 71.10 +1 7365..8108 - 247 115357978 - Bamb_3226 - ABC transporter related 9 70.93 0 8203..8883 - 226 115357979 - Bamb_3227 - molybdate ABC transporter, inner membrane subunit 10 69.42 0 8891..9688 - 265 115357980 - Bamb_3228 - molybdenum ABC transporter, periplasmic molybdate-binding protein 11 70.96 0 9825..10523 - 232 115357981 - Bamb_3229 - phosphoesterase, PA-phosphatase related 12 69.64 0 10771..11880 + 369 115357982 - Bamb_3230 - PHB depolymerase family esterase 13 57.63 -2 11962..12138 + 58 115357983 - Bamb_3231 - hypothetical protein 14 67.14 0 12247..12666 - 139 115357984 - Bamb_3232 - OsmC family protein 15 67.55 0 12820..13272 - 150 115357985 - Bamb_3233 - MarR family transcriptional regulator 16 67.41 0 13451..14260 - 269 115357986 - Bamb_3234 - hypothetical protein 17 67.17 0 14251..15249 - 332 115357987 - Bamb_3235 - homoserine kinase 18 66.91 0 15357..15764 - 135 115357988 - Bamb_3236 - hypothetical protein 19 66.08 0 15905..17431 + 508 115357989 - Bamb_3237 - AMP nucleosidase 20 54.45 -2 18272..18754 + 160 115357990 - Bamb_3238 - hypothetical protein 21 65.57 0 18811..19905 - 364 115357991 - Bamb_3239 - aldo/keto reductase 22 68.82 0 20508..20786 - 92 115357992 - Bamb_3241 - hypothetical protein 23 62.45 -1 21187..21945 - 252 115357993 - Bamb_3242 - hypothetical protein 24 65.25 0 21947..24700 + 917 115357994 - Bamb_3243 - DNA polymerase I 25 68.76 0 24980..26314 + 444 115357995 - Bamb_3244 - NADH dehydrogenase 26 65.18 0 26721..27596 + 291 115357996 - Bamb_3245 - carboxymethylenebutenolidase 27 69.43 0 27648..28517 - 289 115357997 - Bamb_3246 - 3-mercaptopyruvate sulfurtransferase 28 62.69 -1 28635..29741 - 368 115357998 - Bamb_3247 - Rieske (2Fe-2S) domain-containing protein 29 64.63 0 30012..30305 + 97 115357999 - Bamb_3248 - exodeoxyribonuclease VII small subunit 30 69.04 0 30302..31186 + 294 115358000 - Bamb_3249 - polyprenyl synthetase 31 66.20 0 31232..33172 + 646 115358001 - Bamb_3250 - 1-deoxy-D-xylulose-5-phosphate synthase 32 64.69 0 33327..34136 + 269 115358002 - Bamb_3251 - putative GTP cyclohydrolase 33 69.45 0 34237..35277 - 346 115358003 - Bamb_3252 - O-sialoglycoprotein endopeptidase 34 69.62 0 35409..36626 + 405 115358004 - Bamb_3253 - hypothetical protein 35 55.87 -2 36732..36944 + 70 115358005 rpsU Bamb_3254 - 30S ribosomal protein S21 36 65.32 0 37131..37577 + 148 115358006 - Bamb_3255 - GatB/Yqey domain-containing protein 37 65.76 0 37642..39510 + 622 115358007 dnaG Bamb_3256 - DNA primase 38 62.82 -1 39599..42016 + 805 115358008 - Bamb_3257 - RNA polymerase sigma factor RpoD 39 60.73 -1 42358..43149 - 263 115358009 - Bamb_3258 - carboxymuconolactone decarboxylase 40 62.70 -1 43127..43630 - 167 115358010 - Bamb_3259 - cupin 2 domain-containing protein 41 62.50 -1 43648..44415 - 255 115358011 - Bamb_3260 - short-chain dehydrogenase/reductase SDR 42 63.87 0 45193..45942 - 249 115358012 - Bamb_3261 - creatininase 43 64.57 0 45955..47241 - 428 115358013 - Bamb_3262 - major facilitator transporter 44 65.91 0 47412..48335 + 307 115358014 - Bamb_3263 - LysR family transcriptional regulator 45 64.75 0 48569..49561 + 330 115358015 - Bamb_3264 - hypothetical protein 46 57.17 -2 49604..50224 - 206 115358016 - Bamb_3265 - TetR family transcriptional regulator 47 63.80 0 50440..52635 + 731 115358017 - Bamb_3266 - Beta-glucosidase 48 62.58 -1 52783..54030 + 415 115358018 - Bamb_3267 - major facilitator transporter 49 63.37 0 54062..55549 + 495 115358019 - Bamb_3268 - sulfatase 50 61.58 -1 55728..56750 + 340 115358020 - Bamb_3269 - porin 51 65.48 0 56763..57182 + 139 115358021 - Bamb_3270 - transport-associated 52 61.18 -1 57216..58838 + 540 115358022 - Bamb_3271 - sulfatase 53 65.79 0 59028..60632 - 534 115358023 - Bamb_3272 - peptidase S8 and S53, subtilisin, kexin, sedolisin 54 63.14 0 60697..61320 - 207 115358024 - Bamb_3273 - hypothetical protein 55 70.56 0 61569..63056 - 495 115358025 - Bamb_3274 - RND efflux system outer membrane lipoprotein 56 67.55 0 63070..64656 - 528 115358026 - Bamb_3275 - EmrB/QacA family drug resistance transporter 57 71.22 +1 64649..65767 - 372 115358027 - Bamb_3276 - secretion protein HlyD family protein 58 69.08 0 65860..66687 + 275 115358028 - Bamb_3277 - TetR family transcriptional regulator 59 70.02 0 66701..69295 - 864 115358029 - Bamb_3278 - MscS mechanosensitive ion channel 60 70.39 0 69333..70298 - 321 115358030 - Bamb_3279 - luciferase family protein 61 67.65 0 70347..70652 - 101 115358031 - Bamb_3280 - hypothetical protein 62 62.80 -1 70649..71062 - 137 115358032 - Bamb_3281 - hypothetical protein 63 65.22 0 71189..71395 + 68 115358033 - Bamb_3282 - hypothetical protein 64 70.90 0 71392..72288 + 298 115358034 - Bamb_3283 - NAD-dependent deacetylase 65 72.74 +1 72285..72926 + 213 115358035 - Bamb_3284 - hypothetical protein 66 66.17 0 73024..74436 + 470 115358036 - Bamb_3285 - 6-phosphogluconate dehydrogenase 67 66.38 0 74635..74979 + 114 115358037 - Bamb_3286 - hypothetical protein 68 70.09 0 75091..75411 - 106 115358038 - Bamb_3287 - hypothetical protein 69 72.27 +1 75826..76557 + 243 115358039 - Bamb_3288 - peptidase M23B 70 65.26 0 76606..77316 - 236 115358040 - Bamb_3289 - hypothetical protein 71 62.94 0 77476..78012 + 178 115358041 - Bamb_3290 - cytochrome B561 72 71.00 0 78169..78537 + 122 115358042 - Bamb_3291 - hypothetical protein 73 68.83 0 78621..80750 + 709 115358043 - Bamb_3292 - TonB-dependent copper receptor 74 66.85 0 80980..82074 + 364 115358044 - Bamb_3293 - triacylglycerol lipase 75 74.30 +1 82078..83112 + 344 115358045 - Bamb_3294 - lipase chaperone 76 69.55 0 83152..84675 - 507 115358046 - Bamb_3295 - GntR family transcriptional regulator 77 66.39 0 84784..85878 + 364 115358047 - Bamb_3296 - spermidine/putrescine ABC transporter ATPase subunit 78 64.47 0 85956..87002 + 348 115358048 - Bamb_3297 - extracellular solute-binding protein 79 68.17 0 87105..88367 + 420 115358049 - Bamb_3298 - binding-protein-dependent transport systems inner membrane component 80 67.50 0 88405..89241 + 278 115358050 - Bamb_3299 - binding-protein-dependent transport systems inner membrane component 81 71.95 +1 89371..90864 + 497 115358051 - Bamb_3300 - major facilitator transporter 82 67.59 0 90937..92676 - 579 115358052 - Bamb_3301 - peptidase S8 and S53, subtilisin, kexin, sedolisin 83 65.12 0 93377..93700 + 107 115358053 - Bamb_3302 - ArsR family transcriptional regulator 84 65.05 0 93697..94128 + 143 115358054 - Bamb_3303 - activator of Hsp90 ATPase 1 family protein 85 68.71 0 94125..94565 + 146 115358055 - Bamb_3304 - hypothetical protein 86 64.42 0 94709..97426 - 905 115358056 acnA Bamb_3305 - aconitate hydratase 87 67.01 0 97479..98930 - 483 115358057 prpD Bamb_3306 - 2-methylcitrate dehydratase 88 65.88 0 98962..99471 - 169 115358058 - Bamb_3307 - hypothetical protein 89 72.14 +1 99695..100699 - 334 115358059 - Bamb_3308 - HpcH/HpaI aldolase 90 65.65 0 100886..101872 - 328 115358060 - Bamb_3309 - malate dehydrogenase 91 66.79 0 102161..102985 + 274 115358061 - Bamb_3310 - GntR family transcriptional regulator 92 58.27 -2 103155..103571 + 138 115358062 - Bamb_3311 - succinate dehydrogenase, cytochrome b subunit 93 62.33 -1 103576..103944 + 122 115358063 - Bamb_3312 - succinate dehydrogenase, cytochrome b subunit 94 65.32 0 103948..105723 + 591 115358064 sdhA Bamb_3313 - succinate dehydrogenase flavoprotein subunit 95 62.54 -1 105745..106446 + 233 115358065 sdhB Bamb_3314 - succinate dehydrogenase iron-sulfur subunit 96 60.81 -1 106453..106725 + 90 115358066 - Bamb_3315 - hypothetical protein 97 60.75 -1 106792..108093 + 433 115358067 gltA Bamb_3316 - type II citrate synthase 98 72.76 +1 108183..109166 - 327 115358068 - Bamb_3317 - AraC family transcriptional regulator 99 68.21 0 109238..109627 + 129 115358069 - Bamb_3318 - glyoxalase/bleomycin resistance protein/dioxygenase 100 70.10 0 109739..110992 + 417 115358070 - Bamb_3319 - hypothetical protein 101 69.13 0 111217..111987 + 256 115358071 - Bamb_3320 - dimethylargininase 102 64.09 0 112089..112553 + 154 115358072 - Bamb_3321 - AsnC family transcriptional regulator 66.96 MEAN 4.07 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.