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Burkholderia cepacia AMMD chromosome 2, complete sequence - 1..2646969 2346 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 460 70.42 0 527958..529130 - 390 115358430 - Bamb_3680 - alkanesulfonate monooxygenase 461 72.46 +1 529392..530720 + 442 115358431 - Bamb_3681 - acyl-CoA dehydrogenase domain-containing protein 462 71.25 +1 530782..531762 - 326 115358432 - Bamb_3682 - LysR family transcriptional regulator 463 68.08 0 531780..532346 + 188 115358433 - Bamb_3683 - cysteine dioxygenase type I 464 70.92 0 532406..534073 + 555 115358434 - Bamb_3684 - rhodanese domain-containing protein 465 66.75 0 534188..535333 - 381 115358435 - Bamb_3685 - glycerophosphoryl diester phosphodiesterase 466 69.95 0 535692..536756 + 354 115358436 - Bamb_3686 - squalene/phytoene synthase 467 64.78 0 537227..538444 + 405 115358437 - Bamb_3687 - porin 468 72.24 +1 538608..540113 - 501 115358438 - Bamb_3688 - RND efflux system outer membrane lipoprotein 469 67.27 0 540124..541278 - 384 115358439 - Bamb_3689 - ABC-2 type transporter 470 69.65 0 541275..542246 - 323 115358440 - Bamb_3690 - ABC transporter related 471 73.00 +1 542243..543205 - 320 115358441 - Bamb_3691 - secretion protein HlyD family protein 472 67.89 0 543202..543936 - 244 115358442 - Bamb_3692 - TetR family transcriptional regulator 473 64.16 0 544244..544681 - 145 115358443 - Bamb_3693 - alkylhydroperoxidase 474 71.18 +1 544776..546260 - 494 115358444 - Bamb_3694 - GntR family transcriptional regulator 475 72.33 +1 546484..547401 + 305 115358445 - Bamb_3695 - LysR family transcriptional regulator 476 68.82 0 547462..548298 + 278 115358446 - Bamb_3696 - short chain dehydrogenase 477 68.47 0 548363..550081 - 572 115358447 - Bamb_3697 - levanase 478 67.24 0 550127..551707 - 526 115358448 - Bamb_3698 - levansucrase 479 68.89 0 551877..552911 + 344 115358449 - Bamb_3699 - LacI family transcription regulator 480 68.56 0 553329..554015 + 228 115358450 - Bamb_3700 - ThiJ/PfpI domain-containing protein 481 69.73 0 554158..555267 + 369 115358451 - Bamb_3701 - NADH:flavin oxidoreductase/NADH oxidase 482 69.56 0 555429..556499 + 356 115358452 - Bamb_3702 - hypothetical protein 483 65.66 0 556699..557097 + 132 115358453 - Bamb_3703 - hypothetical protein 484 65.66 0 557153..557947 - 264 115358454 - Bamb_3704 - short-chain dehydrogenase/reductase SDR 485 68.90 0 558109..558957 + 282 115358455 - Bamb_3705 - AraC family transcriptional regulator 486 70.13 0 559053..559658 - 201 115358456 - Bamb_3706 - lysine exporter protein LysE/YggA 487 68.18 0 559754..561202 - 482 115358457 - Bamb_3707 - heavy metal sensor signal transduction histidine kinase 488 67.39 0 561199..561894 - 231 115358458 - Bamb_3708 - two component heavy metal response transcriptional regulator 489 72.85 +1 561918..563420 - 500 115358459 - Bamb_3709 - RND efflux system outer membrane lipoprotein 490 71.21 +1 563426..564658 - 410 115358460 - Bamb_3710 - RND family efflux transporter MFP subunit 491 67.14 0 564698..567865 - 1055 115358461 - Bamb_3711 - acriflavin resistance protein 492 68.59 0 568093..568872 - 259 115358462 - Bamb_3712 - cyclic nucleotide-binding protein 493 68.30 0 569089..570741 + 550 115358463 - Bamb_3713 - acyl-CoA synthetase 494 70.70 0 570785..572767 - 660 115358464 - Bamb_3714 - methyl-accepting chemotaxis sensory transducer 495 71.30 +1 572908..573339 - 143 115358465 - Bamb_3715 - membrane protein-like protein 496 67.69 0 573388..574563 - 391 115358466 - Bamb_3716 - voltage-gated potassium channel 497 69.42 0 574684..575337 - 217 115358467 - Bamb_3717 - lysine exporter protein LysE/YggA 498 62.94 0 575621..576103 + 160 115358468 - Bamb_3718 - AsnC family transcriptional regulator 499 59.62 -1 576156..576737 + 193 115358469 - Bamb_3719 - hypothetical protein 500 73.69 +1 576825..578489 - 554 115358470 - Bamb_3720 - IclR family transcriptional regulator 501 65.00 0 578607..579626 + 339 115358471 - Bamb_3721 - beta-lactamase domain-containing protein 502 68.33 0 579809..581188 + 459 115358472 - Bamb_3722 - major facilitator transporter 503 68.79 0 581390..582190 - 266 115358473 - Bamb_3723 - short-chain dehydrogenase/reductase SDR 504 69.39 0 582298..583290 + 330 115358474 - Bamb_3724 - AraC family transcriptional regulator 505 71.14 +1 583301..583792 - 163 115358475 - Bamb_3725 - cupin 2 domain-containing protein 506 70.28 0 583959..584429 + 156 115358476 - Bamb_3726 - MarR family transcriptional regulator 507 69.86 0 584574..585824 + 416 115358477 - Bamb_3727 - major facilitator transporter 508 64.18 0 585831..586877 - 348 115358478 - Bamb_3728 - LysR family transcriptional regulator 509 67.55 0 586911..588269 + 452 115358479 - Bamb_3729 - beta alanine--pyruvate transaminase 510 67.98 0 588318..589835 + 505 115358480 - Bamb_3730 - methylmalonate-semialdehyde dehydrogenase 511 61.87 -1 589998..590372 - 124 115358481 - Bamb_3731 - hypothetical protein 512 71.02 0 590679..591689 - 336 115358482 - Bamb_3732 - auxin efflux carrier 513 70.56 0 591786..592736 - 316 115358483 - Bamb_3733 - LysR family transcriptional regulator 514 65.87 0 592960..593337 + 125 115358484 - Bamb_3734 - hypothetical protein 515 67.79 0 593356..594156 - 266 115358485 - Bamb_3735 - LuxR family transcriptional regulator 516 67.95 0 594340..595746 + 468 115358486 - Bamb_3736 - amino acid permease-associated region 517 71.17 +1 595811..596920 + 369 115358487 - Bamb_3737 - peptidase S58, DmpA 518 69.95 0 597080..597292 - 70 115358488 - Bamb_3738 - hypothetical protein 519 69.19 0 597462..599642 - 726 115358489 - Bamb_3739 - fusaric acid resistance protein region 520 67.09 0 599834..600781 + 315 115358490 - Bamb_3740 - LysR family transcriptional regulator 521 67.70 0 600927..601313 - 128 115358491 - Bamb_3741 - hypothetical protein 522 66.84 0 601457..602599 - 380 115358492 - Bamb_3742 - porin 523 60.21 -1 602719..603771 + 350 115358493 - Bamb_3743 - IS605 family transposase OrfB 524 66.45 0 604096..604560 + 154 115358494 - Bamb_3744 - glyoxalase/bleomycin resistance protein/dioxygenase 525 67.15 0 604634..605875 + 413 115358495 - Bamb_3745 - N-isopropylammelide isopropylaminohydrolase 526 71.75 +1 606054..607391 + 445 115358496 - Bamb_3746 - Cl- channel, voltage-gated family protein 527 66.89 0 607586..608938 + 450 115358497 - Bamb_3747 - hypothetical protein 528 68.62 0 609003..610331 - 442 115358498 - Bamb_3748 - major facilitator transporter 529 67.20 0 610565..611497 - 310 115358499 - Bamb_3749 - hypothetical protein 530 69.17 0 611533..612330 - 265 115358500 - Bamb_3750 - short chain dehydrogenase 531 69.48 0 612405..613115 - 236 115358501 - Bamb_3751 - GntR family transcriptional regulator 532 57.10 -2 613413..613757 + 114 115358502 - Bamb_3752 - XRE family transcriptional regulator 533 63.73 0 613750..615009 + 419 115358503 - Bamb_3753 - HipA domain-containing protein 534 69.34 0 615025..616443 - 472 115358504 - Bamb_3754 - di-haem cytochrome c peroxidase 535 66.91 0 616552..618225 - 557 115358505 - Bamb_3755 - phospholipase C 536 71.10 +1 618625..619482 + 285 115358506 - Bamb_3756 - hypothetical protein 537 61.81 -1 619531..620004 - 157 115358507 - Bamb_3757 - AsnC family transcriptional regulator 538 64.43 0 620324..621709 + 461 115358508 - Bamb_3758 - amino acid permease-associated region 539 67.58 0 621753..622955 + 400 115358509 - Bamb_3759 - aromatic amino acid aminotransferase 540 70.43 0 623085..623483 + 132 115358510 - Bamb_3760 - hypothetical protein 541 62.59 -1 623601..623894 + 97 115358511 - Bamb_3761 - hypothetical protein 542 60.00 -1 623911..624150 + 79 115358512 - Bamb_3762 - hypothetical protein 543 69.21 0 624293..624646 + 117 115358513 - Bamb_3763 - hypothetical protein 544 65.64 0 624671..625450 - 259 115358514 - Bamb_3764 - Crp/FNR family transcriptional regulator 545 67.65 0 625468..625875 - 135 115358515 - Bamb_3765 - response regulator receiver protein 546 74.36 +1 626064..626999 - 311 115358516 - Bamb_3766 - ornithine cyclodeaminase 547 68.70 0 627215..628000 + 261 115358517 - Bamb_3767 - regulatory protein GntR, HTH 548 66.67 0 628122..629243 + 373 115358518 - Bamb_3768 - extracellular ligand-binding receptor 549 67.76 0 629298..630305 + 335 115358519 - Bamb_3769 - proline racemase 550 69.77 0 630503..633115 + 870 115358520 - Bamb_3770 - peptidoglycan glycosyltransferase 551 72.37 +1 633195..634070 + 291 115358521 - Bamb_3771 - type IV pilus assembly PilZ 552 64.24 0 634355..634684 + 109 115358522 - Bamb_3772 - hypothetical protein 553 62.96 0 634954..635358 + 134 115358523 - Bamb_3773 - hypothetical protein 554 65.90 0 635436..636083 - 215 115358524 - Bamb_3774 - two component LuxR family transcriptional regulator 555 69.73 0 636080..638203 - 707 115358525 - Bamb_3775 - multi-sensor signal transduction histidine kinase 556 72.15 +1 638512..638985 + 157 115358526 - Bamb_3776 - UspA domain-containing protein 557 69.23 0 639344..639850 + 168 115358527 - Bamb_3777 - hypothetical protein 558 66.10 0 639996..641045 + 349 115358528 - Bamb_3778 - rhodanese domain-containing protein 559 59.18 -1 641708..650794 + 3028 115358529 - Bamb_3779 - filamentous haemagglutinin outer membrane protein 66.96 MEAN 4.07 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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