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Burkholderia cepacia AMMD chromosome 2, complete sequence - 1..2646969 2346 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 427 72.04 +1 491494..492927 + 477 115358397 - Bamb_3647 - cytochrome c, class I 428 68.94 0 493145..494860 + 571 115358398 - Bamb_3648 - sodium/hydrogen exchanger 429 68.78 0 495193..497085 - 630 115358399 - Bamb_3649 - peptidoglycan glycosyltransferase 430 67.82 0 497427..497774 - 115 115358400 - Bamb_3650 - hypothetical protein 431 71.70 +1 498412..499623 + 403 115358401 - Bamb_3651 - hypothetical protein 432 66.03 0 499694..500161 - 155 115358402 - Bamb_3652 - MarR family transcriptional regulator 433 72.17 +1 500287..500976 + 229 115358403 - Bamb_3653 - 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, HpaG1 subunit 434 67.84 0 500973..501737 + 254 115358404 - Bamb_3654 - 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase,HpaG2 subunit 435 65.85 0 501760..503223 + 487 115358405 - Bamb_3655 - 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase 436 64.78 0 503272..504120 + 282 115358406 - Bamb_3656 - 3,4-dihydroxyphenylacetate 2,3-dioxygenase 437 64.89 0 504150..504542 + 130 115358407 - Bamb_3657 - 5-carboxymethyl-2-hydroxymuconate isomerase 438 67.29 0 504562..505365 + 267 115358408 - Bamb_3658 - 2-oxo-hepta-3-ene-1,7-dioic acid hydratase 439 69.90 0 505378..506181 + 267 115358409 - Bamb_3659 - 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 440 68.31 0 506326..507114 - 262 115358410 - Bamb_3660 - AraC family transcriptional regulator 441 71.83 +1 507210..507461 + 83 115358411 - Bamb_3661 - hypothetical protein 442 70.81 0 507508..508473 + 321 115358412 - Bamb_3662 - alcohol dehydrogenase 443 65.02 0 508545..509636 - 363 115358413 - Bamb_3663 - porin 444 69.66 0 509819..510886 - 355 115358414 - Bamb_3664 - ABC transporter related 445 67.46 0 510879..512651 - 590 115358415 - Bamb_3665 - binding-protein-dependent transport systems inner membrane component 446 62.58 -1 512760..513860 - 366 115358416 - Bamb_3666 - extracellular solute-binding protein 447 68.28 0 514069..515553 - 494 115358417 - Bamb_3667 - GntR family transcriptional regulator 448 67.48 0 515774..517009 + 411 115358418 - Bamb_3668 - Bcr/CflA subfamily drug resistance transporter 449 67.26 0 517124..517798 + 224 115358419 - Bamb_3669 - two component transcriptional regulator 450 70.69 0 517795..519186 + 463 115358420 - Bamb_3670 - periplasmic sensor signal transduction histidine kinase 451 68.21 0 519248..520216 - 322 115358421 - Bamb_3671 - alcohol dehydrogenase 452 69.14 0 520265..520831 - 188 115358422 - Bamb_3672 - TetR family transcriptional regulator 453 67.94 0 520947..521813 - 288 115358423 - Bamb_3673 - MOSC domain-containing protein 454 71.47 +1 521906..522862 - 318 115358424 - Bamb_3674 - aliphatic sulfonate ABC transporter periplasmic ligand-binding protein 455 74.87 +1 522899..524080 - 393 115358425 - Bamb_3675 - cytochrome c, class I 456 71.66 +1 524131..524931 - 266 115358426 - Bamb_3676 - ABC transporter related 457 71.61 +1 524925..526016 - 363 115358427 - Bamb_3677 - binding-protein-dependent transport systems inner membrane component 458 67.44 0 526021..527055 - 344 115358428 - Bamb_3678 - ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components 459 70.21 0 527092..527937 - 281 115358429 - Bamb_3679 - hypothetical protein 460 70.42 0 527958..529130 - 390 115358430 - Bamb_3680 - alkanesulfonate monooxygenase 461 72.46 +1 529392..530720 + 442 115358431 - Bamb_3681 - acyl-CoA dehydrogenase domain-containing protein 462 71.25 +1 530782..531762 - 326 115358432 - Bamb_3682 - LysR family transcriptional regulator 463 68.08 0 531780..532346 + 188 115358433 - Bamb_3683 - cysteine dioxygenase type I 464 70.92 0 532406..534073 + 555 115358434 - Bamb_3684 - rhodanese domain-containing protein 465 66.75 0 534188..535333 - 381 115358435 - Bamb_3685 - glycerophosphoryl diester phosphodiesterase 466 69.95 0 535692..536756 + 354 115358436 - Bamb_3686 - squalene/phytoene synthase 467 64.78 0 537227..538444 + 405 115358437 - Bamb_3687 - porin 468 72.24 +1 538608..540113 - 501 115358438 - Bamb_3688 - RND efflux system outer membrane lipoprotein 469 67.27 0 540124..541278 - 384 115358439 - Bamb_3689 - ABC-2 type transporter 470 69.65 0 541275..542246 - 323 115358440 - Bamb_3690 - ABC transporter related 471 73.00 +1 542243..543205 - 320 115358441 - Bamb_3691 - secretion protein HlyD family protein 472 67.89 0 543202..543936 - 244 115358442 - Bamb_3692 - TetR family transcriptional regulator 473 64.16 0 544244..544681 - 145 115358443 - Bamb_3693 - alkylhydroperoxidase 474 71.18 +1 544776..546260 - 494 115358444 - Bamb_3694 - GntR family transcriptional regulator 475 72.33 +1 546484..547401 + 305 115358445 - Bamb_3695 - LysR family transcriptional regulator 476 68.82 0 547462..548298 + 278 115358446 - Bamb_3696 - short chain dehydrogenase 477 68.47 0 548363..550081 - 572 115358447 - Bamb_3697 - levanase 478 67.24 0 550127..551707 - 526 115358448 - Bamb_3698 - levansucrase 479 68.89 0 551877..552911 + 344 115358449 - Bamb_3699 - LacI family transcription regulator 480 68.56 0 553329..554015 + 228 115358450 - Bamb_3700 - ThiJ/PfpI domain-containing protein 481 69.73 0 554158..555267 + 369 115358451 - Bamb_3701 - NADH:flavin oxidoreductase/NADH oxidase 482 69.56 0 555429..556499 + 356 115358452 - Bamb_3702 - hypothetical protein 483 65.66 0 556699..557097 + 132 115358453 - Bamb_3703 - hypothetical protein 484 65.66 0 557153..557947 - 264 115358454 - Bamb_3704 - short-chain dehydrogenase/reductase SDR 485 68.90 0 558109..558957 + 282 115358455 - Bamb_3705 - AraC family transcriptional regulator 486 70.13 0 559053..559658 - 201 115358456 - Bamb_3706 - lysine exporter protein LysE/YggA 487 68.18 0 559754..561202 - 482 115358457 - Bamb_3707 - heavy metal sensor signal transduction histidine kinase 488 67.39 0 561199..561894 - 231 115358458 - Bamb_3708 - two component heavy metal response transcriptional regulator 489 72.85 +1 561918..563420 - 500 115358459 - Bamb_3709 - RND efflux system outer membrane lipoprotein 490 71.21 +1 563426..564658 - 410 115358460 - Bamb_3710 - RND family efflux transporter MFP subunit 491 67.14 0 564698..567865 - 1055 115358461 - Bamb_3711 - acriflavin resistance protein 492 68.59 0 568093..568872 - 259 115358462 - Bamb_3712 - cyclic nucleotide-binding protein 493 68.30 0 569089..570741 + 550 115358463 - Bamb_3713 - acyl-CoA synthetase 494 70.70 0 570785..572767 - 660 115358464 - Bamb_3714 - methyl-accepting chemotaxis sensory transducer 495 71.30 +1 572908..573339 - 143 115358465 - Bamb_3715 - membrane protein-like protein 496 67.69 0 573388..574563 - 391 115358466 - Bamb_3716 - voltage-gated potassium channel 497 69.42 0 574684..575337 - 217 115358467 - Bamb_3717 - lysine exporter protein LysE/YggA 498 62.94 0 575621..576103 + 160 115358468 - Bamb_3718 - AsnC family transcriptional regulator 499 59.62 -1 576156..576737 + 193 115358469 - Bamb_3719 - hypothetical protein 500 73.69 +1 576825..578489 - 554 115358470 - Bamb_3720 - IclR family transcriptional regulator 501 65.00 0 578607..579626 + 339 115358471 - Bamb_3721 - beta-lactamase domain-containing protein 502 68.33 0 579809..581188 + 459 115358472 - Bamb_3722 - major facilitator transporter 503 68.79 0 581390..582190 - 266 115358473 - Bamb_3723 - short-chain dehydrogenase/reductase SDR 504 69.39 0 582298..583290 + 330 115358474 - Bamb_3724 - AraC family transcriptional regulator 505 71.14 +1 583301..583792 - 163 115358475 - Bamb_3725 - cupin 2 domain-containing protein 506 70.28 0 583959..584429 + 156 115358476 - Bamb_3726 - MarR family transcriptional regulator 507 69.86 0 584574..585824 + 416 115358477 - Bamb_3727 - major facilitator transporter 508 64.18 0 585831..586877 - 348 115358478 - Bamb_3728 - LysR family transcriptional regulator 509 67.55 0 586911..588269 + 452 115358479 - Bamb_3729 - beta alanine--pyruvate transaminase 510 67.98 0 588318..589835 + 505 115358480 - Bamb_3730 - methylmalonate-semialdehyde dehydrogenase 511 61.87 -1 589998..590372 - 124 115358481 - Bamb_3731 - hypothetical protein 512 71.02 0 590679..591689 - 336 115358482 - Bamb_3732 - auxin efflux carrier 513 70.56 0 591786..592736 - 316 115358483 - Bamb_3733 - LysR family transcriptional regulator 514 65.87 0 592960..593337 + 125 115358484 - Bamb_3734 - hypothetical protein 515 67.79 0 593356..594156 - 266 115358485 - Bamb_3735 - LuxR family transcriptional regulator 516 67.95 0 594340..595746 + 468 115358486 - Bamb_3736 - amino acid permease-associated region 517 71.17 +1 595811..596920 + 369 115358487 - Bamb_3737 - peptidase S58, DmpA 518 69.95 0 597080..597292 - 70 115358488 - Bamb_3738 - hypothetical protein 519 69.19 0 597462..599642 - 726 115358489 - Bamb_3739 - fusaric acid resistance protein region 520 67.09 0 599834..600781 + 315 115358490 - Bamb_3740 - LysR family transcriptional regulator 521 67.70 0 600927..601313 - 128 115358491 - Bamb_3741 - hypothetical protein 522 66.84 0 601457..602599 - 380 115358492 - Bamb_3742 - porin 523 60.21 -1 602719..603771 + 350 115358493 - Bamb_3743 - IS605 family transposase OrfB 524 66.45 0 604096..604560 + 154 115358494 - Bamb_3744 - glyoxalase/bleomycin resistance protein/dioxygenase 525 67.15 0 604634..605875 + 413 115358495 - Bamb_3745 - N-isopropylammelide isopropylaminohydrolase 526 71.75 +1 606054..607391 + 445 115358496 - Bamb_3746 - Cl- channel, voltage-gated family protein 66.96 MEAN 4.07 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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