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Burkholderia cepacia AMMD chromosome 2, complete sequence - 1..2646969 2346 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 310 54.99 -2 349061..349951 - 296 115358280 - Bamb_3530 - LysR family transcriptional regulator 311 59.76 -1 350096..350848 + 250 115358281 - Bamb_3531 - short chain dehydrogenase 312 53.70 -2 351110..351826 + 238 115358282 - Bamb_3532 - glutathione S-transferase domain-containing protein 313 64.88 0 352074..353138 - 354 115358283 - Bamb_3533 - aminotransferase, class V 314 69.88 0 353138..354319 - 393 115358284 - Bamb_3534 - thiamine pyrophosphate binding domain-containing protein 315 66.07 0 354316..356001 - 561 115358285 - Bamb_3535 - phosphoenolpyruvate phosphomutase 316 65.76 0 355998..356765 - 255 115358286 - Bamb_3536 - sugar nucleotidyltransferase-like protein 317 72.75 +1 356802..357803 - 333 115358287 - Bamb_3537 - hypothetical protein 318 66.17 0 357800..358609 - 269 115358288 - Bamb_3538 - 2OG-Fe(II) oxygenase 319 67.84 0 358606..359286 - 226 115358289 - Bamb_3539 - CDP-alcohol phosphatidyltransferase 320 67.66 0 359926..361440 + 504 115358290 - Bamb_3540 - Acetyl-CoA hydrolase 321 69.48 0 361641..362066 + 141 115358291 - Bamb_3541 - MerR family transcriptional regulator 322 69.40 0 362145..363023 - 292 115358292 - Bamb_3542 - helix-hairpin-helix DNA-binding, class 1 323 72.40 +1 363212..364762 - 516 115358293 - Bamb_3543 - RNA polymerase, sigma 38 subunit, RpoS 324 70.11 0 365070..365534 + 154 115358294 - Bamb_3544 - hypothetical protein 325 73.94 +1 365568..366419 + 283 115358295 - Bamb_3545 - SH3 type 3 domain-containing protein 326 66.99 0 366536..368395 - 619 115358296 - Bamb_3546 - dihydroxy-acid dehydratase 327 69.99 0 368810..369832 - 340 115358297 - Bamb_3547 - malate/L-lactate dehydrogenase 328 72.07 +1 369825..371417 - 530 115358298 - Bamb_3548 - aldehyde dehydrogenase 329 67.16 0 371488..373113 - 541 115358299 - Bamb_3549 - amino acid permease-associated region 330 69.02 0 373741..374676 + 311 115358300 - Bamb_3550 - proline racemase 331 71.63 +1 374673..375800 + 375 115358301 - Bamb_3551 - FAD dependent oxidoreductase 332 71.79 +1 375901..376134 + 77 115358302 - Bamb_3552 - ferredoxin 333 74.31 +1 376131..377399 + 422 115358303 - Bamb_3553 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase 334 66.38 0 377533..377883 + 116 115358304 - Bamb_3554 - ArsR family transcriptional regulator 335 72.92 +1 377924..378307 + 127 115358305 - Bamb_3555 - protein of unknown function DUF395, YeeE/YedE 336 67.85 0 378309..378731 + 140 115358306 - Bamb_3556 - protein of unknown function DUF395, YeeE/YedE 337 71.23 +1 378856..379206 - 116 115358307 - Bamb_3557 - hypothetical protein 338 69.08 0 379401..380894 + 497 115358308 - Bamb_3558 - GntR family transcriptional regulator 339 69.20 0 381039..381314 - 91 115358309 - Bamb_3559 - hypothetical protein 340 71.94 +1 381411..382757 - 448 115358310 - Bamb_3560 - di-haem cytochrome c peroxidase 341 69.06 0 383231..384694 - 487 115358311 - Bamb_3561 - metallophosphoesterase 342 70.08 0 384875..385723 + 282 115358312 - Bamb_3562 - methyltransferase type 11 343 68.91 0 385766..386077 - 103 115358313 - Bamb_3563 - hypothetical protein 344 66.08 0 386444..387640 - 398 115358314 - Bamb_3564 - porin 345 68.65 0 387759..390179 - 806 115358315 - Bamb_3565 - Alpha-glucosidase 346 66.67 0 390207..391538 - 443 115358316 - Bamb_3566 - major facilitator transporter 347 57.48 -2 391555..391848 - 97 115358317 - Bamb_3567 - hypothetical protein 348 68.98 0 391925..392875 + 316 115358318 - Bamb_3568 - RpiR family transcriptional regulator 349 72.12 +1 392872..393879 + 335 115358319 - Bamb_3569 - peptidase T2, asparaginase 2 350 69.66 0 393907..395808 + 633 115358320 - Bamb_3570 - oligopeptide/dipeptide ABC transporter, ATPase subunit 351 63.98 0 395939..397501 + 520 115358321 - Bamb_3571 - extracellular solute-binding protein 352 67.43 0 397569..398489 + 306 115358322 - Bamb_3572 - binding-protein-dependent transport systems inner membrane component 353 67.56 0 398497..399390 + 297 115358323 - Bamb_3573 - binding-protein-dependent transport systems inner membrane component 354 71.65 +1 399390..400472 + 360 115358324 - Bamb_3574 - peptidase S58, DmpA 355 68.24 0 400469..401296 + 275 115358325 - Bamb_3575 - peptidase M55, D-aminopeptidase 356 68.83 0 401369..402337 + 322 115358326 - Bamb_3576 - AraC family transcriptional regulator 357 64.63 0 402492..402785 - 97 115358327 - Bamb_3577 - hypothetical protein 358 66.84 0 402782..403375 - 197 115358328 - Bamb_3578 - protocatechuate 3,4-dioxygenase, alpha subunit 359 66.81 0 403379..404086 - 235 115358329 - Bamb_3579 - protocatechuate 3,4-dioxygenase, beta subunit 360 73.05 +1 404388..404951 - 187 115358330 - Bamb_3580 - hypothetical protein 361 68.02 0 405072..405809 + 245 115358331 - Bamb_3581 - XRE family transcriptional regulator 362 72.04 +1 405887..406873 + 328 115358332 - Bamb_3582 - LysR family transcriptional regulator 363 64.17 0 407007..407366 + 119 115358333 - Bamb_3583 - hypothetical protein 364 63.64 0 407439..407735 + 98 115358334 - Bamb_3584 - hypothetical protein 365 63.78 0 408253..409707 + 484 115358335 - Bamb_3585 - TolC family type I secretion outer membrane protein 366 63.61 0 409707..411503 + 598 115358336 - Bamb_3586 - type I secretion system ATPase 367 63.65 0 411653..412879 + 408 115358337 - Bamb_3587 - HlyD family type I secretion membrane fusion protein 368 47.70 -2 414836..415399 + 187 115358338 - Bamb_3588 - hypothetical protein 369 53.18 -2 416436..419267 + 943 115358339 - Bamb_3589 - hypothetical protein 370 72.48 +1 419429..420700 - 423 115358340 - Bamb_3590 - amino acid permease-associated region 371 71.26 +1 420829..425355 - 1508 115358341 - Bamb_3591 - DEAD/DEAH box helicase domain-containing protein 372 70.86 0 425615..426139 - 174 115358342 - Bamb_3592 - hypothetical protein 373 64.40 0 426537..428258 + 573 115358343 - Bamb_3593 - gamma-glutamyltransferase 374 63.30 0 428522..429472 + 316 115358344 - Bamb_3594 - hypothetical protein 375 65.62 0 429528..429815 - 95 115358345 - Bamb_3595 - histone family protein nucleoid-structuring protein H-NS 376 68.88 0 430012..430599 - 195 115358346 - Bamb_3596 - hypothetical protein 377 65.37 0 430904..431599 + 231 115358347 - Bamb_3597 - hypothetical protein 378 63.52 0 431583..432377 + 264 115358348 - Bamb_3598 - phospholipid/glycerol acyltransferase 379 53.92 -2 432352..432657 + 101 115358349 - Bamb_3599 - putative acyl-carrier-protein 380 60.64 -1 432654..432902 + 82 115358350 - Bamb_3600 - acyl carrier protein 381 63.71 0 432899..433540 + 213 115358351 - Bamb_3601 - hypothetical protein 382 70.57 0 433537..435228 + 563 115358352 - Bamb_3602 - AMP-dependent synthetase and ligase 383 66.61 0 435225..436931 + 568 115358353 - Bamb_3603 - glycosyl transferase family protein 384 69.50 0 436918..438540 + 540 115358354 - Bamb_3604 - histidine ammonia-lyase 385 61.77 -1 438537..438965 + 142 115358355 - Bamb_3605 - thioesterase superfamily protein 386 69.62 0 438956..439633 + 225 115358356 - Bamb_3606 - putative signal peptide protein 387 69.73 0 439630..442041 + 803 115358357 - Bamb_3607 - putative lipoprotein transmembrane 388 70.20 0 442038..443225 + 395 115358358 - Bamb_3608 - 3-oxoacyl-(acyl carrier protein) synthase I 389 66.67 0 443227..443730 + 167 115358359 - Bamb_3609 - Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ 390 69.42 0 443727..444452 + 241 115358360 - Bamb_3610 - short chain dehydrogenase 391 65.69 0 444452..445681 + 409 115358361 - Bamb_3611 - 3-oxoacyl-(acyl carrier protein) synthase II 392 69.25 0 445678..446916 + 412 115358362 - Bamb_3612 - beta-ketoacyl synthase 393 64.08 0 446949..447374 + 141 115358363 - Bamb_3613 - putative signal peptide protein 394 64.14 0 447386..447820 + 144 115358364 - Bamb_3614 - excinuclease ATPase subunit 395 63.61 0 447865..448584 - 239 115358365 - Bamb_3615 - methyltransferase type 11 396 64.18 0 448695..449942 + 415 115358366 - Bamb_3616 - tryptophan halogenase 397 68.26 0 450008..452209 - 733 115358367 - Bamb_3617 - Beta-glucosidase 398 65.71 0 452666..453925 - 419 115358368 - Bamb_3618 - polysaccharide biosynthesis protein 399 70.44 0 454505..456361 + 618 115358369 - Bamb_3619 - hypothetical protein 400 70.91 0 456498..456968 - 156 115358370 - Bamb_3620 - hypothetical protein 401 70.74 0 457044..458270 + 408 115358371 - Bamb_3621 - polysaccharide export protein 402 68.07 0 458329..460611 + 760 115358372 - Bamb_3622 - hypothetical protein 403 65.11 0 460608..462020 + 470 115358373 - Bamb_3623 - hypothetical protein 404 59.83 -1 462046..463215 + 389 115358374 - Bamb_3624 - acyltransferase 3 405 62.77 -1 463246..464322 - 358 115358375 - Bamb_3625 - glycosyl transferase, group 1 406 65.82 0 464350..465531 - 393 115358376 - Bamb_3626 - glycosyl transferase, group 1 407 66.75 0 465882..467021 - 379 115358377 - Bamb_3627 - glycosyl transferase family protein 408 68.16 0 467259..468533 + 424 115358378 - Bamb_3628 - hypothetical protein 409 68.12 0 468561..470138 - 525 115358379 - Bamb_3629 - mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 66.96 MEAN 4.07 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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