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Burkholderia cepacia AMMD chromosome 2, complete sequence - 1..2646969 2346 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 206 70.79 0 221510..222454 + 314 115358176 - Bamb_3426 - type II secretion system protein 207 72.73 +1 222451..223308 + 285 115358177 - Bamb_3427 - TPR repeat-containing protein 208 67.83 0 223305..223733 + 142 115358178 - Bamb_3428 - TadE family protein 209 70.12 0 223726..224766 + 346 115358179 - Bamb_3429 - hypothetical protein 210 70.51 0 224730..226004 - 424 115358180 - Bamb_3430 - hypothetical protein 211 68.06 0 226019..227095 - 358 115358181 - Bamb_3431 - glycosyl transferase family protein 212 71.76 +1 227369..227761 + 130 115358182 - Bamb_3432 - hypothetical protein 213 73.54 +1 227778..228767 - 329 115358183 - Bamb_3433 - nitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein 214 72.47 +1 228908..229786 - 292 115358184 - Bamb_3434 - LysR family transcriptional regulator 215 58.97 -1 229906..230958 + 350 115358185 - Bamb_3435 - IS605 family transposase OrfB 216 73.41 +1 231076..232632 + 518 115358186 - Bamb_3436 - major facilitator transporter 217 71.87 +1 232692..233864 - 390 115358187 - Bamb_3437 - LysR family transcriptional regulator 218 69.50 0 233959..235227 + 422 115358188 - Bamb_3438 - hypothetical protein 219 62.99 0 235291..236052 - 253 115358189 - Bamb_3439 - hypothetical protein 220 66.07 0 236595..236927 + 110 115358190 - Bamb_3440 - hypothetical protein 221 72.05 +1 237017..237907 - 296 115358191 - Bamb_3441 - 3-hydroxyisobutyrate dehydrogenase 222 67.78 0 237922..239448 - 508 115358192 - Bamb_3442 - methylmalonate-semialdehyde dehydrogenase 223 69.47 0 239570..240889 - 439 115358193 - Bamb_3443 - major facilitator transporter 224 69.34 0 241034..242005 + 323 115358194 - Bamb_3444 - LysR family transcriptional regulator 225 61.23 -1 242149..242424 + 91 115358195 - Bamb_3445 - hypothetical protein 226 68.54 0 242450..243250 - 266 115358196 - Bamb_3446 - haloacid dehalogenase, type II 227 59.56 -1 243334..243516 - 60 115358197 - Bamb_3447 - hypothetical protein 228 68.80 0 243731..245980 + 749 115358198 - Bamb_3448 - diguanylate cyclase/phosphodiesterase with GAF sensor 229 69.74 0 245985..247058 - 357 115358199 - Bamb_3449 - diguanylate cyclase 230 73.23 +1 247114..248118 - 334 115358200 - Bamb_3450 - chemotaxis-specific methylesterase 231 61.78 -1 248509..248733 - 74 115358201 - Bamb_3451 - hypothetical protein 232 68.41 0 249026..249715 + 229 115358202 - Bamb_3452 - hypothetical protein 233 67.19 0 249712..250662 + 316 115358203 - Bamb_3453 - hypothetical protein 234 70.09 0 250673..251695 + 340 115358204 - Bamb_3454 - hypothetical protein 235 69.58 0 251847..252911 + 354 115358205 - Bamb_3455 - L-asparaginase II 236 65.79 0 253007..254029 - 340 115358206 - Bamb_3456 - LysR family transcriptional regulator 237 66.95 0 254138..255544 + 468 115358207 aspA Bamb_3457 - aspartate ammonia-lyase 238 67.60 0 255648..257141 + 497 115358208 - Bamb_3458 - amino acid permease-associated region 239 70.03 0 257185..257928 - 247 115358209 - Bamb_3459 - phospholipase/carboxylesterase 240 61.73 -1 258139..258381 + 80 115358210 - Bamb_3460 - SpoVT/AbrB domain-containing protein 241 60.29 -1 258378..258785 + 135 115358211 - Bamb_3461 - PilT domain-containing protein 242 67.67 0 259235..261625 + 796 115358212 - Bamb_3462 - putative CheA signal transduction histidine kinases 243 72.33 +1 261628..262368 + 246 115358213 - Bamb_3463 - methyl-accepting chemotaxis sensory transducer 244 69.57 0 262365..262949 + 194 115358214 - Bamb_3464 - hypothetical protein 245 66.56 0 263027..263929 + 300 115358215 - Bamb_3465 - hypothetical protein 246 64.75 0 263965..264330 + 121 115358216 - Bamb_3466 - response regulator receiver protein 247 64.49 0 264557..265660 - 367 115358217 - Bamb_3467 - ImpA domain-containing protein 248 64.80 0 265657..266730 - 357 115358218 - Bamb_3468 - hypothetical protein 249 63.60 0 266730..268619 - 629 115358219 - Bamb_3469 - hypothetical protein 250 65.05 0 268652..269209 - 185 115358220 - Bamb_3470 - hypothetical protein 251 65.96 0 269202..270053 - 283 115358221 - Bamb_3471 - virulence protein, SciE type 252 63.09 0 270050..270496 - 148 115358222 - Bamb_3472 - hypothetical protein 253 65.07 0 271254..273947 + 897 115358223 - Bamb_3473 - ATPase 254 62.43 -1 273986..274528 + 180 115358224 - Bamb_3474 - hypothetical protein 255 61.45 -1 274556..276049 + 497 115358225 - Bamb_3475 - hypothetical protein 256 60.29 -1 276142..276627 + 161 115358226 - Bamb_3476 - hypothetical protein 257 64.30 0 276714..277220 + 168 115358227 - Bamb_3477 - hypothetical protein 258 64.21 0 277252..278595 + 447 115358228 - Bamb_3478 - hypothetical protein 259 60.01 -1 278884..281421 + 845 115358229 - Bamb_3479 - Rhs element Vgr protein 260 56.95 -2 281396..282280 + 294 115358230 - Bamb_3480 - hypothetical protein 261 56.25 -2 282817..284832 + 671 115358231 - Bamb_3481 - hypothetical protein 262 48.06 -2 284825..285754 + 309 115358232 - Bamb_3482 - hypothetical protein 263 55.20 -2 285825..286103 + 92 115358233 - Bamb_3483 - PAAR repeat-containing protein 264 60.82 -1 286100..287398 + 432 115358234 - Bamb_3484 - hypothetical protein 265 63.79 0 287424..291521 + 1365 115358235 - Bamb_3485 - ImcF domain-containing protein 266 65.19 0 291542..292756 + 404 115358236 - Bamb_3486 - OmpA/MotB domain-containing protein 267 66.78 0 292778..293659 - 293 115358237 - Bamb_3487 - LysR family transcriptional regulator 268 68.94 0 293790..295199 + 469 115358238 - Bamb_3488 - major facilitator transporter 269 68.81 0 295318..296112 + 264 115358239 - Bamb_3489 - enoyl-CoA hydratase 270 70.59 0 296261..297382 - 373 115358240 - Bamb_3490 - alanine racemase 271 66.40 0 297686..298057 + 123 115358241 - Bamb_3491 - membrane protein-like protein 272 68.99 0 298100..299047 - 315 115358242 - Bamb_3492 - LysR family transcriptional regulator 273 71.44 +1 299168..302707 + 1179 115358243 - Bamb_3493 - ABC transporter related 274 65.66 0 303195..303392 + 65 115358244 - Bamb_3494 - hypothetical protein 275 70.00 0 303413..304462 + 349 115358245 - Bamb_3495 - peptidase C45, acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase 276 66.52 0 304478..305812 + 444 115358246 - Bamb_3496 - hypothetical protein 277 67.57 0 305838..306392 + 184 115358247 - Bamb_3497 - carboxymuconolactone decarboxylase 278 63.33 0 306601..307500 + 299 115358248 - Bamb_3498 - aspartyl/asparaginyl beta-hydroxylase 279 73.29 +1 307683..308543 + 286 115358249 - Bamb_3499 - hypothetical protein 280 66.60 0 308658..310256 - 532 115358250 - Bamb_3500 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase 281 61.88 -1 310379..310942 - 187 115358251 - Bamb_3501 - alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 282 72.02 +1 311263..312270 + 335 115358252 - Bamb_3502 - extracellular solute-binding protein 283 69.09 0 312254..313576 + 440 115358253 - Bamb_3503 - sodium:dicarboxylate symporter 284 72.22 +1 313587..314288 + 233 115358254 - Bamb_3504 - aspartate racemase 285 69.35 0 314373..315266 - 297 115358255 - Bamb_3505 - LysR family transcriptional regulator 286 70.01 0 315444..316610 + 388 115358256 - Bamb_3506 - extracellular ligand-binding receptor 287 68.70 0 316627..317166 + 179 115358257 - Bamb_3507 - hypothetical protein 288 71.28 +1 317159..318415 + 418 115358258 - Bamb_3508 - allantoate amidohydrolase 289 72.40 +1 318426..319262 - 278 115358259 - Bamb_3509 - cytochrome c, class I 290 70.43 0 319615..320916 - 433 115358260 - Bamb_3510 - hypothetical protein 291 67.32 0 320913..322736 - 607 115358261 - Bamb_3511 - glucosamine--fructose-6-phosphate aminotransferase, isomerizing 292 68.10 0 322859..323347 - 162 115358262 - Bamb_3512 - hypothetical protein 293 63.60 0 323325..324596 - 423 115358263 - Bamb_3513 - N-glycosyltransferase PgaC 294 64.71 0 324593..326686 - 697 115358264 - Bamb_3514 - polysaccharide deacetylase 295 68.80 0 326702..329566 - 954 115358265 - Bamb_3515 - hypothetical protein 296 70.30 0 329671..330441 - 256 115358266 - Bamb_3516 - hypothetical protein 297 65.12 0 330527..330979 - 150 115358267 - Bamb_3517 - hypothetical protein 298 67.47 0 331649..332641 - 330 115358268 - Bamb_3518 - LysR family transcriptional regulator 299 65.69 0 333287..334717 + 476 115358269 - Bamb_3519 - hypothetical protein 300 65.50 0 334782..335723 + 313 115358270 - Bamb_3520 - hypothetical protein 301 69.81 0 335732..336748 + 338 115358271 - Bamb_3521 - transglutaminase domain-containing protein 302 68.96 0 336842..340291 + 1149 115358272 - Bamb_3522 - transglutaminase domain-containing protein 303 71.61 +1 340504..343110 + 868 115358273 - Bamb_3523 - hypothetical protein 304 71.10 +1 343104..344162 + 352 115358274 - Bamb_3524 - transglutaminase domain-containing protein 305 67.03 0 344346..344618 + 90 115358275 - Bamb_3525 - hypothetical protein 66.96 MEAN 4.07 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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