version 1.0
Burkholderia cepacia AMMD chromosome 2, complete sequence - 1..2646969 2346 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 180 67.68 0 197799..198587 + 262 115358150 - Bamb_3400 - short-chain dehydrogenase/reductase SDR 181 61.37 -1 198599..198919 + 106 115358151 - Bamb_3401 - L-rhamnose 1-epimerase 182 66.44 0 199038..199934 + 298 115358152 - Bamb_3402 - amidohydrolase 2 183 69.14 0 199998..200159 - 53 115358153 - Bamb_3403 - putative lipoprotein 184 65.11 0 200225..201382 - 385 115358154 - Bamb_3404 - hypothetical protein 185 59.62 -1 201752..201964 + 70 115358155 - Bamb_3405 - hypothetical protein 186 69.97 0 202016..202318 - 100 115358156 - Bamb_3406 - hypothetical protein 187 65.25 0 202405..202827 - 140 115358157 - Bamb_3407 - NUDIX hydrolase 188 67.53 0 202925..204313 - 462 115358158 - Bamb_3408 - uracil-xanthine permease 189 72.49 +1 204509..205486 - 325 115358159 - Bamb_3409 - LysR family transcriptional regulator 190 67.64 0 205619..206335 + 238 115358160 - Bamb_3410 - short-chain dehydrogenase/reductase SDR 191 65.48 0 206525..206860 + 111 115358161 - Bamb_3411 - antibiotic biosynthesis monooxygenase 192 70.55 0 206857..208014 + 385 115358162 - Bamb_3412 - alcohol dehydrogenase 193 70.77 0 208187..208771 + 194 115358163 - Bamb_3413 - hypothetical protein 194 69.79 0 208792..209784 - 330 115358164 - Bamb_3414 - aliphatic sulfonate ABC transporter periplasmic ligand-binding protein 195 67.16 0 210003..210410 - 135 115358165 - Bamb_3415 - hypothetical protein 196 66.54 0 210851..212437 + 528 115358166 - Bamb_3416 - extracellular solute-binding protein 197 68.65 0 212571..213527 - 318 115358167 - Bamb_3417 - taurine dioxygenase 198 58.89 -1 214248..214427 + 59 115358168 - Bamb_3418 - Flp/Fap pilin component 199 72.92 +1 214516..214995 + 159 115358169 - Bamb_3419 - peptidase A24A, prepilin type IV 200 74.44 +1 215016..216044 + 342 115358170 - Bamb_3420 - Flp pilus assembly CpaB 201 67.68 0 216099..217481 + 460 115358171 - Bamb_3421 - type II and III secretion system protein 202 73.18 +1 217496..217879 + 127 115358172 - Bamb_3422 - hypothetical protein 203 68.22 0 217901..219124 + 407 115358173 - Bamb_3423 - response regulator receiver protein 204 68.50 0 219121..220539 + 472 115358174 - Bamb_3424 - type II secretion system protein E 205 68.71 0 220536..221513 + 325 115358175 - Bamb_3425 - type II secretion system protein 206 70.79 0 221510..222454 + 314 115358176 - Bamb_3426 - type II secretion system protein 207 72.73 +1 222451..223308 + 285 115358177 - Bamb_3427 - TPR repeat-containing protein 208 67.83 0 223305..223733 + 142 115358178 - Bamb_3428 - TadE family protein 209 70.12 0 223726..224766 + 346 115358179 - Bamb_3429 - hypothetical protein 210 70.51 0 224730..226004 - 424 115358180 - Bamb_3430 - hypothetical protein 211 68.06 0 226019..227095 - 358 115358181 - Bamb_3431 - glycosyl transferase family protein 212 71.76 +1 227369..227761 + 130 115358182 - Bamb_3432 - hypothetical protein 213 73.54 +1 227778..228767 - 329 115358183 - Bamb_3433 - nitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein 214 72.47 +1 228908..229786 - 292 115358184 - Bamb_3434 - LysR family transcriptional regulator 215 58.97 -1 229906..230958 + 350 115358185 - Bamb_3435 - IS605 family transposase OrfB 216 73.41 +1 231076..232632 + 518 115358186 - Bamb_3436 - major facilitator transporter 217 71.87 +1 232692..233864 - 390 115358187 - Bamb_3437 - LysR family transcriptional regulator 218 69.50 0 233959..235227 + 422 115358188 - Bamb_3438 - hypothetical protein 219 62.99 0 235291..236052 - 253 115358189 - Bamb_3439 - hypothetical protein 220 66.07 0 236595..236927 + 110 115358190 - Bamb_3440 - hypothetical protein 221 72.05 +1 237017..237907 - 296 115358191 - Bamb_3441 - 3-hydroxyisobutyrate dehydrogenase 222 67.78 0 237922..239448 - 508 115358192 - Bamb_3442 - methylmalonate-semialdehyde dehydrogenase 223 69.47 0 239570..240889 - 439 115358193 - Bamb_3443 - major facilitator transporter 224 69.34 0 241034..242005 + 323 115358194 - Bamb_3444 - LysR family transcriptional regulator 225 61.23 -1 242149..242424 + 91 115358195 - Bamb_3445 - hypothetical protein 226 68.54 0 242450..243250 - 266 115358196 - Bamb_3446 - haloacid dehalogenase, type II 227 59.56 -1 243334..243516 - 60 115358197 - Bamb_3447 - hypothetical protein 228 68.80 0 243731..245980 + 749 115358198 - Bamb_3448 - diguanylate cyclase/phosphodiesterase with GAF sensor 229 69.74 0 245985..247058 - 357 115358199 - Bamb_3449 - diguanylate cyclase 230 73.23 +1 247114..248118 - 334 115358200 - Bamb_3450 - chemotaxis-specific methylesterase 231 61.78 -1 248509..248733 - 74 115358201 - Bamb_3451 - hypothetical protein 232 68.41 0 249026..249715 + 229 115358202 - Bamb_3452 - hypothetical protein 233 67.19 0 249712..250662 + 316 115358203 - Bamb_3453 - hypothetical protein 234 70.09 0 250673..251695 + 340 115358204 - Bamb_3454 - hypothetical protein 235 69.58 0 251847..252911 + 354 115358205 - Bamb_3455 - L-asparaginase II 236 65.79 0 253007..254029 - 340 115358206 - Bamb_3456 - LysR family transcriptional regulator 237 66.95 0 254138..255544 + 468 115358207 aspA Bamb_3457 - aspartate ammonia-lyase 238 67.60 0 255648..257141 + 497 115358208 - Bamb_3458 - amino acid permease-associated region 239 70.03 0 257185..257928 - 247 115358209 - Bamb_3459 - phospholipase/carboxylesterase 240 61.73 -1 258139..258381 + 80 115358210 - Bamb_3460 - SpoVT/AbrB domain-containing protein 241 60.29 -1 258378..258785 + 135 115358211 - Bamb_3461 - PilT domain-containing protein 242 67.67 0 259235..261625 + 796 115358212 - Bamb_3462 - putative CheA signal transduction histidine kinases 243 72.33 +1 261628..262368 + 246 115358213 - Bamb_3463 - methyl-accepting chemotaxis sensory transducer 244 69.57 0 262365..262949 + 194 115358214 - Bamb_3464 - hypothetical protein 245 66.56 0 263027..263929 + 300 115358215 - Bamb_3465 - hypothetical protein 246 64.75 0 263965..264330 + 121 115358216 - Bamb_3466 - response regulator receiver protein 247 64.49 0 264557..265660 - 367 115358217 - Bamb_3467 - ImpA domain-containing protein 248 64.80 0 265657..266730 - 357 115358218 - Bamb_3468 - hypothetical protein 249 63.60 0 266730..268619 - 629 115358219 - Bamb_3469 - hypothetical protein 250 65.05 0 268652..269209 - 185 115358220 - Bamb_3470 - hypothetical protein 251 65.96 0 269202..270053 - 283 115358221 - Bamb_3471 - virulence protein, SciE type 252 63.09 0 270050..270496 - 148 115358222 - Bamb_3472 - hypothetical protein 253 65.07 0 271254..273947 + 897 115358223 - Bamb_3473 - ATPase 254 62.43 -1 273986..274528 + 180 115358224 - Bamb_3474 - hypothetical protein 255 61.45 -1 274556..276049 + 497 115358225 - Bamb_3475 - hypothetical protein 256 60.29 -1 276142..276627 + 161 115358226 - Bamb_3476 - hypothetical protein 257 64.30 0 276714..277220 + 168 115358227 - Bamb_3477 - hypothetical protein 258 64.21 0 277252..278595 + 447 115358228 - Bamb_3478 - hypothetical protein 259 60.01 -1 278884..281421 + 845 115358229 - Bamb_3479 - Rhs element Vgr protein 260 56.95 -2 281396..282280 + 294 115358230 - Bamb_3480 - hypothetical protein 261 56.25 -2 282817..284832 + 671 115358231 - Bamb_3481 - hypothetical protein 262 48.06 -2 284825..285754 + 309 115358232 - Bamb_3482 - hypothetical protein 263 55.20 -2 285825..286103 + 92 115358233 - Bamb_3483 - PAAR repeat-containing protein 264 60.82 -1 286100..287398 + 432 115358234 - Bamb_3484 - hypothetical protein 265 63.79 0 287424..291521 + 1365 115358235 - Bamb_3485 - ImcF domain-containing protein 266 65.19 0 291542..292756 + 404 115358236 - Bamb_3486 - OmpA/MotB domain-containing protein 267 66.78 0 292778..293659 - 293 115358237 - Bamb_3487 - LysR family transcriptional regulator 268 68.94 0 293790..295199 + 469 115358238 - Bamb_3488 - major facilitator transporter 269 68.81 0 295318..296112 + 264 115358239 - Bamb_3489 - enoyl-CoA hydratase 270 70.59 0 296261..297382 - 373 115358240 - Bamb_3490 - alanine racemase 271 66.40 0 297686..298057 + 123 115358241 - Bamb_3491 - membrane protein-like protein 272 68.99 0 298100..299047 - 315 115358242 - Bamb_3492 - LysR family transcriptional regulator 273 71.44 +1 299168..302707 + 1179 115358243 - Bamb_3493 - ABC transporter related 274 65.66 0 303195..303392 + 65 115358244 - Bamb_3494 - hypothetical protein 275 70.00 0 303413..304462 + 349 115358245 - Bamb_3495 - peptidase C45, acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase 276 66.52 0 304478..305812 + 444 115358246 - Bamb_3496 - hypothetical protein 277 67.57 0 305838..306392 + 184 115358247 - Bamb_3497 - carboxymuconolactone decarboxylase 278 63.33 0 306601..307500 + 299 115358248 - Bamb_3498 - aspartyl/asparaginyl beta-hydroxylase 279 73.29 +1 307683..308543 + 286 115358249 - Bamb_3499 - hypothetical protein 66.96 MEAN 4.07 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.