version 1.0
Burkholderia cepacia AMMD chromosome 2, complete sequence - 1..2646969 2346 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2224 61.23 -1 2512402..2513247 + 281 115360194 - Bamb_5451 - hypothetical protein 2225 64.20 0 2513391..2514728 - 445 115360195 - Bamb_5452 - argininosuccinate synthase 2226 69.37 0 2515080..2516150 - 356 115360196 - Bamb_5453 - membrane protein 2227 68.04 0 2516322..2517854 - 510 115360197 - Bamb_5454 - diguanylate cyclase 2228 66.48 0 2518351..2519961 + 536 115360198 - Bamb_5455 - amino acid permease-associated region 2229 67.89 0 2520221..2520466 + 81 115360199 - Bamb_5456 - hypothetical protein 2230 65.47 0 2520761..2521678 + 305 115360200 - Bamb_5457 - LysR family transcriptional regulator 2231 71.91 +1 2521795..2522652 + 285 115360201 - Bamb_5458 - alpha/beta hydrolase fold 2232 61.11 -1 2522695..2523072 - 125 115360202 - Bamb_5459 - hypothetical protein 2233 67.15 0 2523270..2523890 - 206 115360203 - Bamb_5460 - TetR family transcriptional regulator 2234 72.20 +1 2523985..2525232 + 415 115360204 - Bamb_5461 - glycosyl transferase family protein 2235 67.10 0 2525249..2525944 - 231 115360205 - Bamb_5462 - histidine utilization repressor 2236 63.57 0 2526439..2527212 + 257 115360206 - Bamb_5463 - cationic amino acid ABC transporter, periplasmic binding protein 2237 64.64 0 2527279..2527968 + 229 115360207 - Bamb_5464 - polar amino acid ABC transporter, inner membrane subunit 2238 64.57 0 2527965..2528678 + 237 115360208 - Bamb_5465 - polar amino acid ABC transporter, inner membrane subunit 2239 62.63 -1 2528697..2529464 + 255 115360209 - Bamb_5466 - ABC transporter related 2240 61.59 -1 2529646..2529921 + 91 115360210 - Bamb_5467 - hypothetical protein 2241 66.90 0 2530259..2531542 + 427 115360211 - Bamb_5468 - cyclic nucleotide-binding protein 2242 67.71 0 2531566..2532330 + 254 115360212 - Bamb_5469 - MotA/TolQ/ExbB proton channel 2243 69.00 0 2532349..2533035 + 228 115360213 - Bamb_5470 - OmpA/MotB domain-containing protein 2244 66.88 0 2533185..2535047 + 620 115360214 - Bamb_5471 - methyl-accepting chemotaxis sensory transducer 2245 67.26 0 2535098..2535937 + 279 115360215 - Bamb_5472 - hypothetical protein 2246 64.04 0 2536020..2537237 - 405 115360216 - Bamb_5473 - UDP-N-acetylglucosamine 2-epimerase 2247 71.79 +1 2537940..2538212 + 90 115360217 - Bamb_5474 - hypothetical protein 2248 67.58 0 2538472..2540001 + 509 115360218 - Bamb_5475 - glycosyl transferase family protein 2249 71.39 +1 2540005..2541000 + 331 115360219 - Bamb_5476 - hypothetical protein 2250 65.15 0 2541224..2542078 + 284 115360220 - Bamb_5477 - hypothetical protein 2251 65.87 0 2542093..2542848 + 251 115360221 - Bamb_5478 - hypothetical protein 2252 64.41 0 2543201..2545369 + 722 115360222 - Bamb_5479 - outer membrane protein 2253 67.13 0 2545461..2546549 + 362 115360223 - Bamb_5480 - hypothetical protein 2254 66.83 0 2546613..2548430 + 605 115360224 - Bamb_5481 - glucosamine--fructose-6-phosphate aminotransferase, isomerizing 2255 61.45 -1 2548532..2549509 - 325 115360225 - Bamb_5482 - hypothetical protein 2256 65.15 0 2549778..2550239 + 153 115360226 - Bamb_5483 - hypothetical protein 2257 70.38 0 2550303..2551757 - 484 115360227 - Bamb_5484 - RND efflux system outer membrane lipoprotein 2258 66.92 0 2551774..2553348 - 524 115360228 - Bamb_5485 - EmrB/QacA family drug resistance transporter 2259 70.05 0 2553362..2554453 - 363 115360229 - Bamb_5486 - secretion protein HlyD family protein 2260 69.44 0 2554518..2554949 - 143 115360230 - Bamb_5487 - MarR family transcriptional regulator 2261 69.38 0 2555057..2555977 - 306 115360231 - Bamb_5488 - LysR family transcriptional regulator 2262 66.02 0 2556050..2556514 + 154 115360232 - Bamb_5489 - MarR family transcriptional regulator 2263 66.99 0 2556581..2557828 + 415 115360233 - Bamb_5490 - hypothetical protein 2264 68.44 0 2557821..2558270 + 149 115360234 - Bamb_5491 - hypothetical protein 2265 69.07 0 2558280..2559362 - 360 115360235 - Bamb_5492 - AraC family transcriptional regulator 2266 69.03 0 2559438..2561471 + 677 115360236 - Bamb_5493 - NADH:flavin oxidoreductase/NADH oxidase 2267 68.89 0 2561651..2562055 - 134 115360237 - Bamb_5494 - hypothetical protein 2268 67.90 0 2562231..2563124 - 297 115360238 - Bamb_5495 - LysR family transcriptional regulator 2269 66.03 0 2563211..2563996 + 261 115360239 - Bamb_5496 - NAD(P)H dehydrogenase (quinone) 2270 59.79 -1 2564058..2564348 - 96 115360240 - Bamb_5497 - muconolactone delta-isomerase 2271 66.11 0 2564392..2565294 - 300 115360241 - Bamb_5498 - catechol 1,2-dioxygenase 2272 68.34 0 2565331..2566464 - 377 115360242 - Bamb_5499 - muconate and chloromuconate cycloisomerases 2273 69.92 0 2566556..2567446 + 296 115360243 - Bamb_5500 - LysR family transcriptional regulator 2274 70.81 0 2567793..2568758 - 321 115360244 - Bamb_5501 - AraC family transcriptional regulator 2275 63.15 0 2568917..2570251 + 444 115360245 - Bamb_5502 - Rieske (2Fe-2S) domain-containing protein 2276 60.94 -1 2570248..2570736 + 162 115360246 - Bamb_5503 - aromatic-ring-hydroxylating dioxygenase, beta subunit 2277 64.53 0 2570754..2571080 + 108 115360247 - Bamb_5504 - Rieske (2Fe-2S) domain-containing protein 2278 71.66 +1 2571070..2572290 + 406 115360248 - Bamb_5505 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase 2279 66.15 0 2572409..2573764 + 451 115360249 - Bamb_5506 - hypothetical protein 2280 66.67 0 2573816..2574115 - 99 115360250 - Bamb_5507 - putative transcriptional regulator 2281 65.45 0 2574119..2574448 - 109 115360251 - Bamb_5508 - hypothetical protein 2282 63.68 0 2574761..2576401 + 546 115360252 - Bamb_5509 - acetolactate synthase 2283 67.15 0 2576430..2577863 + 477 115360253 - Bamb_5510 - aldehyde dehydrogenase 2284 68.37 0 2578107..2579690 + 527 115360254 - Bamb_5511 - Na+/H+ antiporter 2285 66.40 0 2580266..2581399 + 377 115360255 - Bamb_5512 - response regulator receiver sensor signal transduction histidine kinase 2286 67.08 0 2581520..2583196 + 558 115360256 - Bamb_5513 - methyl-accepting chemotaxis sensory transducer 2287 71.54 +1 2583193..2583705 + 170 115360257 - Bamb_5514 - CheW protein 2288 72.04 +1 2583702..2585264 + 520 115360258 - Bamb_5515 - MCP methyltransferase, CheR-type 2289 71.92 +1 2585295..2586017 + 240 115360259 - Bamb_5516 - CheW protein 2290 71.00 0 2586014..2588323 + 769 115360260 - Bamb_5517 - CheA signal transduction histidine kinases 2291 73.53 +1 2588320..2589339 + 339 115360261 - Bamb_5518 - chemotaxis-specific methylesterase 2292 70.61 0 2589582..2590823 + 413 115360262 - Bamb_5519 - Cl- channel, voltage-gated family protein 2293 63.79 0 2590873..2591532 + 219 115360263 - Bamb_5520 - hypothetical protein 2294 66.15 0 2591529..2592110 + 193 115360264 - Bamb_5521 - hypothetical protein 2295 61.76 -1 2592129..2592842 - 237 115360265 - Bamb_5522 - riboflavin synthase subunit alpha 2296 69.19 0 2593063..2594925 - 620 115360266 - Bamb_5523 - ABC transporter related 2297 69.16 0 2595432..2596313 + 293 115360267 - Bamb_5524 - Dyp-type peroxidase family protein 2298 70.40 0 2596456..2596857 - 133 115360268 - Bamb_5525 - OsmC family protein 2299 70.14 0 2596976..2597896 - 306 115360269 - Bamb_5526 - LysR family transcriptional regulator 2300 67.77 0 2598298..2599389 + 363 115360270 - Bamb_5527 - AraC family transcriptional regulator 2301 67.94 0 2599479..2600654 + 391 115360271 - Bamb_5528 - manganese transport protein MntH 2302 68.84 0 2600727..2601323 + 198 115360272 - Bamb_5529 - phosphoesterase, PA-phosphatase related 2303 69.07 0 2601761..2602549 + 262 115360273 - Bamb_5530 - short chain dehydrogenase 2304 70.60 0 2602585..2603601 + 338 115360274 - Bamb_5531 - alcohol dehydrogenase 2305 69.84 0 2603766..2604269 + 167 115360275 - Bamb_5532 - hypothetical protein 2306 63.11 0 2604279..2605346 - 355 115360276 - Bamb_5533 - hypothetical protein 2307 66.67 0 2605557..2606141 - 194 115360277 - Bamb_5534 - hypothetical protein 2308 69.74 0 2606212..2606601 - 129 115360278 - Bamb_5535 - protein of unknown function DUF883, ElaB 2309 69.69 0 2606939..2608822 - 627 115360279 - Bamb_5536 - endonuclease/exonuclease/phosphatase 2310 67.23 0 2608949..2609302 + 117 115360280 - Bamb_5537 - DGPFAETKE family protein 2311 67.38 0 2609434..2609856 + 140 115360281 - Bamb_5538 - DGPFAETKE family protein 2312 68.82 0 2609883..2610299 + 138 115360282 - Bamb_5539 - glyoxalase/bleomycin resistance protein/dioxygenase 2313 72.26 +1 2610296..2611564 + 422 115360283 - Bamb_5540 - RNA polymerase ECF-subfamily sigma factor 2314 62.41 -1 2611776..2612198 + 140 115360284 - Bamb_5541 - rubrerythrin 2315 68.09 0 2612324..2613661 + 445 115360285 - Bamb_5542 - Fe-S oxidoreductase-like protein 2316 66.84 0 2613710..2614291 + 193 115360286 - Bamb_5543 - hypothetical protein 2317 68.37 0 2614985..2615926 + 313 115360287 - Bamb_5544 - hypothetical protein 2318 68.04 0 2616048..2617574 - 508 115360288 - Bamb_5545 - mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 2319 64.37 0 2617954..2619387 + 477 115360289 - Bamb_5546 - sugar transferase 2320 68.01 0 2619455..2620867 + 470 115360290 - Bamb_5547 - UDP-glucose 6-dehydrogenase 2321 66.22 0 2620908..2621351 + 147 115360291 - Bamb_5548 - protein tyrosine phosphatase 2322 66.67 0 2621345..2622523 + 392 115360292 - Bamb_5549 - polysaccharide export protein 2323 67.79 0 2622574..2624799 + 741 115360293 - Bamb_5550 - hypothetical protein 66.96 MEAN 4.07 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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