version 1.0
Burkholderia cepacia AMMD chromosome 2, complete sequence - 1..2646969 2346 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2129 70.03 0 2397205..2398125 + 306 115360099 - Bamb_5356 - LysR family transcriptional regulator 2130 69.72 0 2398177..2399157 - 326 115360100 - Bamb_5357 - ferredoxin 2131 68.74 0 2399313..2400710 - 465 115360101 - Bamb_5358 - major facilitator transporter 2132 70.38 0 2401122..2402252 + 376 115360102 - Bamb_5359 - porin 2133 70.42 0 2402285..2403322 - 345 115360103 - Bamb_5360 - LysR family transcriptional regulator 2134 72.62 +1 2403319..2404293 - 324 115360104 - Bamb_5361 - AraC family transcriptional regulator 2135 71.82 +1 2404443..2405549 + 368 115360105 - Bamb_5362 - NAD/NADP octopine/nopaline dehydrogenase 2136 70.72 0 2405546..2406556 + 336 115360106 - Bamb_5363 - 3-hydroxybutyryl-CoA dehydrogenase 2137 70.21 0 2406583..2407965 - 460 115360107 - Bamb_5364 - major facilitator transporter 2138 60.00 -1 2408440..2408709 + 89 115360108 - Bamb_5365 - GP29 2139 61.04 -1 2408710..2412564 + 1284 115360109 - Bamb_5366 - Rhs element Vgr protein 2140 51.23 -2 2412566..2413420 + 284 115360110 - Bamb_5367 - hypothetical protein 2141 51.28 -2 2413612..2413923 + 103 115360111 - Bamb_5368 - hypothetical protein 2142 52.05 -2 2413925..2414779 + 284 115360112 - Bamb_5369 - hypothetical protein 2143 66.57 0 2414978..2416024 - 348 115360113 - Bamb_5370 - extracellular solute-binding protein 2144 72.93 +1 2416021..2417169 - 382 115360114 - Bamb_5371 - FAD dependent oxidoreductase 2145 74.00 +1 2417162..2418607 - 481 115360115 - Bamb_5372 - BFD/(2Fe-2S)-binding domain-containing protein 2146 72.46 +1 2418604..2418948 - 114 115360116 - Bamb_5373 - hypothetical protein 2147 66.54 0 2418951..2419745 - 264 115360117 - Bamb_5374 - binding-protein-dependent transport systems inner membrane component 2148 70.34 0 2419742..2420722 - 326 115360118 - Bamb_5375 - binding-protein-dependent transport systems inner membrane component 2149 68.70 0 2420723..2421805 - 360 115360119 - Bamb_5376 - ABC transporter related 2150 57.83 -2 2421829..2422077 + 82 115360120 - Bamb_5377 - hypothetical protein 2151 71.40 +1 2422098..2422985 + 295 115360121 - Bamb_5378 - IclR family transcriptional regulator 2152 65.42 0 2422986..2423225 + 79 115360122 - Bamb_5379 - hypothetical protein 2153 67.43 0 2423263..2424825 - 520 115360123 - Bamb_5380 - methyl-accepting chemotaxis sensory transducer 2154 66.40 0 2425114..2426592 - 492 115360124 - Bamb_5381 - phosphoesterase 2155 64.38 0 2426682..2427161 + 159 115360125 - Bamb_5382 - hypothetical protein 2156 66.15 0 2427192..2427575 + 127 115360126 - Bamb_5383 - hypothetical protein 2157 72.68 +1 2427783..2429012 - 409 115360127 - Bamb_5384 - major facilitator transporter 2158 71.61 +1 2429226..2430095 - 289 115360128 - Bamb_5385 - XRE family transcriptional regulator 2159 71.92 +1 2430191..2431084 + 297 115360129 - Bamb_5386 - 3-beta hydroxysteroid dehydrogenase/isomerase 2160 70.00 0 2431139..2432128 - 329 115360130 - Bamb_5387 - alcohol dehydrogenase 2161 63.53 0 2432515..2435508 + 997 115360131 - Bamb_5388 - amino acid adenylation domain-containing protein 2162 66.22 0 2435537..2436439 - 300 115360132 - Bamb_5389 - LysR family transcriptional regulator 2163 68.92 0 2436536..2437912 - 458 115360133 - Bamb_5390 - mercuric reductase 2164 63.60 0 2438167..2439210 - 347 115360134 - Bamb_5391 - LysR family transcriptional regulator 2165 64.78 0 2439255..2440421 + 388 115360135 - Bamb_5392 - mandelate racemase/muconate lactonizing protein 2166 65.57 0 2440584..2441951 + 455 115360136 - Bamb_5393 - sodium:dicarboxylate symporter 2167 69.87 0 2442019..2442612 - 197 115360137 - Bamb_5394 - hypothetical protein 2168 65.04 0 2442621..2442743 - 40 115360138 - Bamb_5395 - GCN5-related N-acetyltransferase 2169 69.95 0 2442905..2443543 + 212 115360139 - Bamb_5396 - lysine exporter protein LysE/YggA 2170 69.69 0 2443648..2444904 - 418 115360140 - Bamb_5397 - hypothetical protein 2171 72.52 +1 2445047..2445268 + 73 115360141 - Bamb_5398 - hypothetical protein 2172 73.47 +1 2445388..2446137 + 249 115360142 - Bamb_5399 - hypothetical protein 2173 68.77 0 2446148..2449195 + 1015 115360143 - Bamb_5400 - hypothetical protein 2174 69.92 0 2449199..2449843 + 214 115360144 - Bamb_5401 - hypothetical protein 2175 70.22 0 2449840..2450487 + 215 115360145 - Bamb_5402 - hypothetical protein 2176 68.94 0 2450517..2451089 - 190 115360146 - Bamb_5403 - NADPH-dependent FMN reductase 2177 70.03 0 2451144..2451857 - 237 115360147 - Bamb_5404 - hypothetical protein 2178 60.30 -1 2452050..2453102 - 350 115360148 - Bamb_5405 - IS605 family transposase OrfB 2179 66.74 0 2453609..2454892 - 427 115360149 - Bamb_5406 - hypothetical protein 2180 75.12 +2 2455013..2456242 - 409 115360150 - Bamb_5407 - triple helix repeat-containing collagen 2181 67.18 0 2456407..2456985 + 192 115360151 - Bamb_5408 - hypothetical protein 2182 58.44 -2 2457077..2457307 + 76 115360152 - Bamb_5409 - hypothetical protein 2183 69.42 0 2457454..2457852 + 132 115360153 - Bamb_5410 - carboxymuconolactone decarboxylase 2184 71.83 +1 2457930..2458916 - 328 115360154 - Bamb_5411 - alpha/beta hydrolase fold 2185 67.63 0 2458924..2460486 - 520 115360155 - Bamb_5412 - FAD dependent oxidoreductase 2186 72.06 +1 2460483..2461409 - 308 115360156 - Bamb_5413 - short-chain dehydrogenase/reductase SDR 2187 68.19 0 2461497..2462153 + 218 115360157 - Bamb_5414 - TetR family transcriptional regulator 2188 63.26 0 2462465..2462728 - 87 115360158 - Bamb_5415 - hypothetical protein 2189 70.07 0 2462864..2463802 - 312 115360159 - Bamb_5416 - LysR family transcriptional regulator 2190 72.25 +1 2463930..2464574 + 214 115360160 - Bamb_5417 - glutathione S-transferase domain-containing protein 2191 71.63 +1 2464622..2466676 + 684 115360161 - Bamb_5418 - pyridoxamine 5'-phosphate oxidase-related, FMN-binding 2192 60.78 -1 2466798..2467001 + 67 115360162 - Bamb_5419 - hypothetical protein 2193 69.22 0 2467474..2469705 + 743 115360163 - Bamb_5420 - TonB-dependent siderophore receptor 2194 70.59 0 2469765..2470376 + 203 115360164 - Bamb_5421 - nicotinamide mononucleotide transporter PnuC 2195 69.86 0 2470413..2471603 + 396 115360165 - Bamb_5422 - aminoglycoside phosphotransferase 2196 61.05 -1 2471760..2472044 - 94 115360166 - Bamb_5423 - hypothetical protein 2197 65.12 0 2472346..2472603 + 85 115360167 - Bamb_5424 - hypothetical protein 2198 53.47 -2 2472896..2473327 - 143 115360168 - Bamb_5425 - hypothetical protein 2199 47.87 -2 2473550..2473996 - 148 115360169 - Bamb_5426 - two component LuxR family transcriptional regulator 2200 50.00 -2 2474164..2474643 - 159 115360170 - Bamb_5427 - hypothetical protein 2201 66.82 0 2475086..2476381 - 431 115360171 - Bamb_5428 - O-acetylhomoserine/O-acetylserine sulfhydrylase 2202 67.71 0 2476514..2477182 + 222 115360172 - Bamb_5429 - O-methyltransferase family protein 2203 68.23 0 2477192..2478343 - 383 115360173 - Bamb_5430 - hypothetical protein 2204 67.04 0 2478602..2479414 - 270 115360174 - Bamb_5431 - nucleotidyltransferase-like protein 2205 66.91 0 2479470..2480693 - 407 115360175 - Bamb_5432 - hypothetical protein 2206 66.32 0 2480758..2481897 - 379 115360176 - Bamb_5433 - band 7 protein 2207 67.84 0 2482564..2484180 + 538 115360177 - Bamb_5434 - regulator of RNA terminal phosphate cyclase 2208 69.42 0 2484205..2484966 - 253 115360178 - Bamb_5435 - methyltransferase type 12 2209 67.94 0 2484981..2485610 - 209 115360179 - Bamb_5436 - lysine exporter protein LysE/YggA 2210 62.74 -1 2485701..2486972 - 423 115360180 - Bamb_5437 - HipA domain-containing protein 2211 68.24 0 2486969..2487475 - 168 115360181 - Bamb_5438 - XRE family transcriptional regulator 2212 68.73 0 2487727..2488647 - 306 115360182 - Bamb_5439 - LysR family transcriptional regulator 2213 69.44 0 2488744..2489826 + 360 115360183 - Bamb_5440 - tartrate dehydrogenase 2214 67.20 0 2490020..2491330 + 436 115360184 - Bamb_5441 - major facilitator transporter 2215 61.95 -1 2491367..2491663 - 98 115360185 - Bamb_5442 - hypothetical protein 2216 65.98 0 2492029..2494221 + 730 115360186 - Bamb_5443 - filamentous haemagglutinin outer membrane protein 2217 66.94 0 2494221..2496047 + 608 115360187 - Bamb_5444 - polypeptide-transport-associated domain-containing protein 2218 66.12 0 2496242..2496979 + 245 115360188 - Bamb_5445 - PpiC-type peptidyl-prolyl cis-trans isomerase 2219 65.83 0 2497213..2509002 + 3929 115360189 - Bamb_5446 - adhesin 2220 52.87 -2 2509004..2509351 + 115 115360190 - Bamb_5447 - hypothetical protein 2221 63.02 0 2509577..2509987 + 136 115360191 - Bamb_5448 - transposase mutator family protein 2222 62.93 0 2510070..2510792 + 240 115360192 - Bamb_5449 - transposase, mutator type 2223 65.27 0 2511417..2512349 + 310 115360193 - Bamb_5450 - hypothetical protein 2224 61.23 -1 2512402..2513247 + 281 115360194 - Bamb_5451 - hypothetical protein 2225 64.20 0 2513391..2514728 - 445 115360195 - Bamb_5452 - argininosuccinate synthase 2226 69.37 0 2515080..2516150 - 356 115360196 - Bamb_5453 - membrane protein 2227 68.04 0 2516322..2517854 - 510 115360197 - Bamb_5454 - diguanylate cyclase 2228 66.48 0 2518351..2519961 + 536 115360198 - Bamb_5455 - amino acid permease-associated region 66.96 MEAN 4.07 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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