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Burkholderia cepacia AMMD chromosome 2, complete sequence - 1..2646969 2346 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2024 64.28 0 2288866..2290038 + 390 115359994 - Bamb_5250 - FAD dependent oxidoreductase 2025 62.73 -1 2290320..2290979 + 219 115359995 - Bamb_5251 - heat shock protein DnaJ domain-containing protein 2026 56.90 -2 2291154..2291921 + 255 115359996 - Bamb_5252 - extracellular solute-binding protein 2027 58.74 -2 2292026..2292643 - 205 115359997 - Bamb_5253 - GCN5-related N-acetyltransferase 2028 55.13 -2 2292919..2293620 - 233 115359998 - Bamb_5254 - hypothetical protein 2029 58.14 -2 2294062..2294448 - 128 115359999 - Bamb_5255 - MerR family transcriptional regulator 2030 59.52 -1 2294535..2295443 + 302 115360000 - Bamb_5256 - alpha/beta hydrolase fold 2031 64.19 0 2295472..2296077 - 201 115360001 - Bamb_5257 - LuxR family transcriptional regulator 2032 63.81 0 2296127..2296651 - 174 115360002 - Bamb_5258 - V4R domain-containing protein 2033 65.48 0 2297687..2299033 - 448 115360003 - Bamb_5260 - major facilitator transporter 2034 59.20 -1 2299404..2300354 + 316 115360004 - Bamb_5261 - hypothetical protein 2035 68.25 0 2300514..2301713 + 399 115360005 - Bamb_5262 - aminotransferase, class I and II 2036 68.34 0 2302019..2302615 + 198 115360006 - Bamb_5263 - pyridoxamine 5'-phosphate oxidase-related, FMN-binding 2037 67.37 0 2302789..2304066 + 425 115360007 - Bamb_5264 - epocide hydrolase domain-containing protein 2038 66.86 0 2304379..2305419 + 346 115360008 - Bamb_5265 - alpha/beta hydrolase fold 2039 68.72 0 2305419..2305955 + 178 115360009 - Bamb_5266 - hypothetical protein 2040 70.76 0 2306233..2306574 + 113 115360010 - Bamb_5267 - hypothetical protein 2041 68.94 0 2306657..2307448 + 263 115360011 - Bamb_5268 - hypothetical protein 2042 69.94 0 2307555..2308958 + 467 115360012 - Bamb_5269 - amidase 2043 68.94 0 2309123..2309737 - 204 115360013 - Bamb_5270 - lysine exporter protein LysE/YggA 2044 66.54 0 2309900..2311540 - 546 115360014 groEL Bamb_5271 - chaperonin GroEL 2045 66.67 0 2311553..2311843 - 96 115360015 groES Bamb_5272 - co-chaperonin GroES 2046 56.03 -2 2312251..2312532 + 93 115360016 - Bamb_5273 - hypothetical protein 2047 59.76 -1 2312532..2312864 + 110 115360017 - Bamb_5274 - hypothetical protein 2048 67.22 0 2313145..2313864 + 239 115360018 - Bamb_5275 - short chain dehydrogenase 2049 68.15 0 2314006..2315955 + 649 115360019 - Bamb_5276 - sulfatase 2050 71.14 +1 2315966..2317015 + 349 115360020 - Bamb_5277 - hypothetical protein 2051 69.51 0 2317012..2317821 + 269 115360021 - Bamb_5278 - NLPA lipoprotein 2052 67.68 0 2317815..2318012 + 65 115360022 - Bamb_5279 - hypothetical protein 2053 65.44 0 2318078..2318404 + 108 115360023 - Bamb_5280 - hypothetical protein 2054 69.88 0 2318467..2319399 - 310 115360024 - Bamb_5281 - LysR family transcriptional regulator 2055 68.35 0 2319605..2320378 + 257 115360025 - Bamb_5282 - hypothetical protein 2056 69.81 0 2320565..2321869 + 434 115360026 - Bamb_5283 - major facilitator transporter 2057 71.04 +1 2321988..2325626 + 1212 115360027 - Bamb_5284 - 5-oxoprolinase (ATP-hydrolyzing) 2058 66.17 0 2326301..2328304 + 667 115360028 - Bamb_5285 - RNase II stability modulator 2059 64.24 0 2328362..2329225 - 287 115360029 - Bamb_5286 - enoyl-CoA hydratase 2060 58.73 -2 2329656..2329907 + 83 115360030 - Bamb_5287 - hypothetical protein 2061 64.49 0 2330095..2330415 + 106 115360031 - Bamb_5288 - hypothetical protein 2062 70.71 0 2330752..2331048 - 98 115360032 - Bamb_5289 - hypothetical protein 2063 61.83 -1 2331260..2331445 - 61 115360033 - Bamb_5290 - hypothetical protein 2064 70.55 0 2331777..2333681 + 634 115360034 - Bamb_5291 - hypothetical protein 2065 68.45 0 2333758..2333925 + 55 115360035 - Bamb_5292 - hypothetical protein 2066 71.50 +1 2333997..2335031 - 344 115360036 - Bamb_5293 - AraC family transcriptional regulator 2067 72.11 +1 2335174..2336313 + 379 115360037 - Bamb_5294 - major facilitator transporter 2068 70.44 0 2336467..2337234 - 255 115360038 - Bamb_5295 - PEP phosphonomutase 2069 70.27 0 2337221..2338276 - 351 115360039 - Bamb_5296 - saccharopine dehydrogenase 2070 66.67 0 2338396..2338989 + 197 115360040 - Bamb_5297 - TetR family transcriptional regulator 2071 64.53 0 2339020..2339487 - 155 115360041 - Bamb_5298 - MarR family transcriptional regulator 2072 66.12 0 2339570..2339938 + 122 115360042 - Bamb_5299 - hypothetical protein 2073 64.08 0 2340013..2340630 + 205 115360043 - Bamb_5300 - glutathione S-transferase domain-containing protein 2074 66.80 0 2340679..2341434 - 251 115360044 - Bamb_5301 - HAD family hydrolase 2075 68.52 0 2341431..2342402 - 323 115360045 - Bamb_5302 - ornithine cyclodeaminase 2076 68.52 0 2342537..2343667 - 376 115360046 - Bamb_5303 - alanine racemase domain-containing protein 2077 66.98 0 2343781..2344752 - 323 115360047 - Bamb_5304 - LysR family transcriptional regulator 2078 68.85 0 2344807..2345721 - 304 115360048 - Bamb_5305 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase 2079 67.35 0 2345864..2346304 + 146 115360049 - Bamb_5306 - BadM/Rrf2 family transcriptional regulator 2080 74.11 +1 2346564..2347154 + 196 115360050 - Bamb_5307 - hypothetical protein 2081 71.34 +1 2347151..2348992 + 613 115360051 - Bamb_5308 - molecular chaperone-like protein 2082 72.62 +1 2348998..2351754 + 918 115360052 - Bamb_5309 - molecular chaperone-like protein 2083 68.49 0 2351848..2352888 - 346 115360053 - Bamb_5310 - amidinotransferase 2084 68.43 0 2352909..2353988 - 359 115360054 - Bamb_5311 - ornithine cyclodeaminase 2085 66.20 0 2354293..2354724 + 143 115360055 - Bamb_5312 - AsnC family transcriptional regulator 2086 67.17 0 2354779..2355372 - 197 115360056 - Bamb_5313 - uncharacterized peroxidase-related enzyme 2087 66.48 0 2355369..2355899 - 176 115360057 - Bamb_5314 - hypothetical protein 2088 71.30 +1 2355945..2357369 - 474 115360058 - Bamb_5315 - FAD dependent oxidoreductase 2089 72.58 +1 2357366..2358379 - 337 115360059 - Bamb_5316 - LysR family transcriptional regulator 2090 68.43 0 2358735..2359928 + 397 115360060 - Bamb_5317 - extracellular ligand-binding receptor 2091 69.87 0 2359969..2361780 + 603 115360061 - Bamb_5318 - inner-membrane translocator 2092 72.73 +1 2361792..2362649 + 285 115360062 - Bamb_5319 - ABC transporter related 2093 67.58 0 2362646..2363410 + 254 115360063 - Bamb_5320 - ABC transporter related 2094 63.48 0 2363435..2363998 - 187 115360064 - Bamb_5321 - DinB family protein 2095 66.92 0 2364309..2364710 + 133 115360065 - Bamb_5322 - hypothetical protein 2096 61.97 -1 2364796..2365242 + 148 115360066 - Bamb_5323 - hypothetical protein 2097 68.42 0 2365280..2366701 - 473 115360067 - Bamb_5324 - periplasmic sensor signal transduction histidine kinase 2098 68.02 0 2366688..2367353 - 221 115360068 - Bamb_5325 - two component transcriptional regulator 2099 69.22 0 2367588..2368604 + 338 115360069 - Bamb_5326 - ABC nitrate/sulfonate/bicarbonate transporter, periplasmic ligand binding protein 2100 67.81 0 2368706..2370016 + 436 115360070 - Bamb_5327 - major facilitator transporter 2101 63.04 0 2370057..2370332 + 91 115360071 - Bamb_5328 - hypothetical protein 2102 70.13 0 2370391..2372178 - 595 115360072 - Bamb_5329 - periplasmic sensor signal transduction histidine kinase 2103 69.60 0 2372175..2372822 - 215 115360073 - Bamb_5330 - two component LuxR family transcriptional regulator 2104 72.15 +1 2373090..2373581 + 163 115360074 - Bamb_5331 - hypothetical protein 2105 73.35 +1 2373684..2375702 + 672 115360075 - Bamb_5332 - DedA family membrane protein 2106 71.21 +1 2375718..2376047 - 109 115360076 - Bamb_5333 - putative transcriptional regulator 2107 62.16 -1 2376044..2376376 - 110 115360077 - Bamb_5334 - hypothetical protein 2108 63.19 0 2376492..2376779 + 95 115360078 - Bamb_5335 - hypothetical protein 2109 71.77 +1 2376938..2379388 - 816 115360079 - Bamb_5336 - alpha/beta hydrolase domain-containing protein 2110 69.94 0 2379375..2381177 - 600 115360080 - Bamb_5337 - glucose-methanol-choline oxidoreductase 2111 59.07 -1 2381195..2382247 + 350 115360081 - Bamb_5338 - IS605 family transposase OrfB 2112 75.36 +2 2382291..2382428 - 45 115360082 - Bamb_5339 - hypothetical protein 2113 69.16 0 2382509..2383630 + 373 115360083 - Bamb_5340 - AraC family transcriptional regulator 2114 68.43 0 2383671..2384180 + 169 115360084 - Bamb_5341 - GCN5-related N-acetyltransferase 2115 67.61 0 2384189..2385142 - 317 115360085 - Bamb_5342 - hypothetical protein 2116 60.98 -1 2385201..2385323 - 40 115360086 - Bamb_5343 - hypothetical protein 2117 73.56 +1 2385951..2387198 + 415 115360087 - Bamb_5344 - major facilitator transporter 2118 69.41 0 2387261..2387806 - 181 115360088 - Bamb_5345 - 4-hydroxyphenylacetate 3-monooxygenase, reductase subunit 2119 67.14 0 2388140..2388772 + 210 115360089 - Bamb_5346 - two component LuxR family transcriptional regulator 2120 69.76 0 2388825..2389568 - 247 115360090 - Bamb_5347 - short-chain dehydrogenase/reductase SDR 2121 72.89 +1 2389625..2390749 - 374 115360091 - Bamb_5348 - amidase 2122 72.38 +1 2390782..2391324 - 180 115360092 - Bamb_5349 - hypothetical protein 2123 68.52 0 2391333..2391710 - 125 115360093 - Bamb_5350 - hypothetical protein 66.96 MEAN 4.07 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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