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Burkholderia cepacia AMMD chromosome 2, complete sequence - 1..2646969 2346 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1948 65.68 0 2203132..2203536 - 134 115359918 - Bamb_5173 - hypothetical protein 1949 68.79 0 2203533..2204942 - 469 115359919 - Bamb_5174 - major facilitator transporter 1950 67.60 0 2205137..2205997 - 286 115359920 - Bamb_5175 - hypothetical protein 1951 60.81 -1 2206046..2206438 - 130 115359921 - Bamb_5176 - hypothetical protein 1952 66.95 0 2206435..2206791 - 118 115359922 - Bamb_5177 - HxlR family transcriptional regulator 1953 66.67 0 2206932..2207567 + 211 115359923 - Bamb_5178 - glutathione S-transferase domain-containing protein 1954 63.78 0 2207646..2208026 + 126 115359924 - Bamb_5179 - hypothetical protein 1955 69.61 0 2208118..2209410 + 430 115359925 - Bamb_5180 - outer membrane efflux protein 1956 69.50 0 2209422..2210939 + 505 115359926 - Bamb_5181 - RND family efflux transporter MFP subunit 1957 68.38 0 2210936..2214142 + 1068 115359927 - Bamb_5182 - CzcA family heavy metal efflux protein 1958 65.03 0 2214139..2214504 + 121 115359928 - Bamb_5183 - RND family efflux transporter MFP subunit 1959 67.06 0 2214628..2215638 - 336 115359929 - Bamb_5184 - sodium/calcium exchanger membrane region 1960 69.42 0 2216032..2217447 - 471 115359930 - Bamb_5185 - heavy metal sensor signal transduction histidine kinase 1961 64.88 0 2217444..2218115 - 223 115359931 - Bamb_5186 - two component heavy metal response transcriptional regulator 1962 67.03 0 2218226..2218780 + 184 115359932 - Bamb_5187 - hypothetical protein 1963 71.38 +1 2218875..2219171 + 98 115359933 - Bamb_5188 - hypothetical protein 1964 69.66 0 2219168..2220739 + 523 115359934 - Bamb_5189 - outer membrane efflux protein 1965 67.82 0 2220741..2222036 + 431 115359935 - Bamb_5190 - multicopper oxidase, type 2; multicopper oxidase, type 3 1966 63.25 0 2222116..2222466 + 116 115359936 - Bamb_5191 - hypothetical protein 1967 68.69 0 2222481..2222876 + 131 115359937 - Bamb_5192 - copper resistance protein CopC 1968 71.34 +1 2222873..2223814 + 313 115359938 - Bamb_5193 - copper resistance D domain-containing protein 1969 68.48 0 2224012..2225826 + 604 115359939 - Bamb_5194 - endonuclease/exonuclease/phosphatase 1970 66.40 0 2226633..2228483 + 616 115359940 - Bamb_5195 - peptidase S10, serine carboxypeptidase 1971 66.20 0 2228528..2228956 + 142 115359941 - Bamb_5196 - hypothetical protein 1972 68.27 0 2229119..2230117 - 332 115359942 - Bamb_5197 - AraC family transcriptional regulator 1973 64.98 0 2230323..2231570 + 415 115359943 - Bamb_5198 - FAD-linked oxidoreductase 1974 66.54 0 2231604..2232383 + 259 115359944 - Bamb_5199 - short-chain dehydrogenase/reductase SDR 1975 64.18 0 2232705..2233952 + 415 115359945 - Bamb_5200 - serine hydroxymethyltransferase 1976 64.28 0 2234102..2235694 - 530 115359946 - Bamb_5201 - amino acid permease-associated region 1977 69.43 0 2236397..2237881 - 494 115359947 - Bamb_5203 - aminotransferase, class V 1978 62.76 -1 2238146..2238478 - 110 115359948 - Bamb_5204 - hypothetical protein 1979 62.40 -1 2238479..2238736 - 85 115359949 - Bamb_5205 - PAAR repeat-containing protein 1980 59.51 -1 2238803..2240143 - 446 115359950 - Bamb_5206 - hypothetical protein 1981 60.25 -1 2240363..2241703 - 446 115359951 - Bamb_5207 - hypothetical protein 1982 59.49 -1 2241838..2244150 - 770 115359952 - Bamb_5208 - putative transmembrane protein 1983 64.97 0 2244169..2246937 - 922 115359953 - Bamb_5209 - Rhs element Vgr protein 1984 68.67 0 2247683..2248933 + 416 115359954 - Bamb_5210 - major facilitator transporter 1985 65.16 0 2249080..2250009 + 309 115359955 - Bamb_5211 - LysR family transcriptional regulator 1986 65.45 0 2250124..2250618 + 164 115359956 - Bamb_5212 - hypothetical protein 1987 64.51 0 2250662..2251681 + 339 115359957 - Bamb_5213 - hypothetical protein 1988 67.69 0 2251714..2253180 + 488 115359958 - Bamb_5214 - betaine-aldehyde dehydrogenase 1989 71.63 +1 2253188..2254255 + 355 115359959 - Bamb_5215 - iron-containing alcohol dehydrogenase 1990 65.64 0 2254284..2255156 + 290 115359960 - Bamb_5216 - intradiol ring-cleavage dioxygenase 1991 66.99 0 2255162..2255473 + 103 115359961 - Bamb_5217 - YCII-related 1992 67.26 0 2255477..2255812 + 111 115359962 - Bamb_5218 - Rieske (2Fe-2S) domain-containing protein 1993 61.98 -1 2256047..2257135 + 362 115359963 - Bamb_5219 - porin 1994 67.27 0 2257208..2257867 - 219 115359964 - Bamb_5220 - glutathione S-transferase domain-containing protein 1995 66.33 0 2257910..2258803 + 297 115359965 - Bamb_5221 - AraC family transcriptional regulator 1996 63.95 0 2259105..2259878 + 257 115359966 - Bamb_5222 - hypothetical protein 1997 56.67 -2 2259975..2260544 - 189 115359967 - Bamb_5223 - hypothetical protein 1998 57.11 -2 2260974..2264144 + 1056 115359968 - Bamb_5224 - DNA helicase related protein 1999 59.01 -1 2264185..2265072 + 295 115359969 - Bamb_5225 - hypothetical protein 2000 58.02 -2 2265966..2267156 - 396 115359970 - Bamb_5226 - hypothetical protein 2001 64.81 0 2267445..2269274 - 609 115359971 - Bamb_5227 - glucosamine--fructose-6-phosphate aminotransferase, isomerizing 2002 68.29 0 2269431..2269922 + 163 115359972 - Bamb_5228 - AsnC family transcriptional regulator 2003 68.30 0 2269952..2270806 - 284 115359973 - Bamb_5229 - 3-methyl-2-oxobutanoate hydroxymethyltransferase 2004 68.38 0 2270884..2271702 + 272 115359974 - Bamb_5230 - AraC family transcriptional regulator 2005 66.29 0 2271716..2272249 - 177 115359975 - Bamb_5231 - methylated-DNA--protein-cysteine methyltransferase 2006 64.98 0 2272263..2272736 - 157 115359976 - Bamb_5232 - hypothetical protein 2007 66.43 0 2272733..2273161 - 142 115359977 - Bamb_5233 - hypothetical protein 2008 68.14 0 2273594..2274886 + 430 115359978 - Bamb_5234 - major facilitator transporter 2009 67.37 0 2274986..2275978 - 330 115359979 - Bamb_5235 - LacI family transcription regulator 2010 67.38 0 2276204..2277040 + 278 115359980 - Bamb_5236 - NAD-dependent epimerase/dehydratase 2011 67.16 0 2277060..2277461 - 133 115359981 - Bamb_5237 - hypothetical protein 2012 62.96 0 2277746..2278069 - 107 115359982 - Bamb_5238 - hypothetical protein 2013 68.88 0 2278689..2279321 + 210 115359983 - Bamb_5239 - lysine exporter protein LysE/YggA 2014 65.01 0 2279447..2281075 - 542 115359984 - Bamb_5240 - aldehyde dehydrogenase 2015 67.19 0 2281549..2282502 - 317 115359985 - Bamb_5241 - LysR family transcriptional regulator 2016 65.89 0 2282724..2283752 + 342 115359986 - Bamb_5242 - hypothetical protein 2017 56.57 -2 2283978..2284175 - 65 115359987 - Bamb_5243 - CsbD family protein 2018 62.39 -1 2284229..2284579 - 116 115359988 - Bamb_5244 - transport-associated 2019 71.52 +1 2284651..2284815 - 54 115359989 - Bamb_5245 - hypothetical protein 2020 67.93 0 2284793..2285188 - 131 115359990 - Bamb_5246 - hypothetical protein 2021 67.90 0 2285207..2286751 + 514 115359991 - Bamb_5247 - LuxR family transcriptional regulator 2022 63.02 0 2286917..2287108 + 63 115359992 - Bamb_5248 - CsbD family protein 2023 65.97 0 2287520..2288671 + 383 115359993 - Bamb_5249 - extracellular ligand-binding receptor 2024 64.28 0 2288866..2290038 + 390 115359994 - Bamb_5250 - FAD dependent oxidoreductase 2025 62.73 -1 2290320..2290979 + 219 115359995 - Bamb_5251 - heat shock protein DnaJ domain-containing protein 2026 56.90 -2 2291154..2291921 + 255 115359996 - Bamb_5252 - extracellular solute-binding protein 2027 58.74 -2 2292026..2292643 - 205 115359997 - Bamb_5253 - GCN5-related N-acetyltransferase 2028 55.13 -2 2292919..2293620 - 233 115359998 - Bamb_5254 - hypothetical protein 2029 58.14 -2 2294062..2294448 - 128 115359999 - Bamb_5255 - MerR family transcriptional regulator 2030 59.52 -1 2294535..2295443 + 302 115360000 - Bamb_5256 - alpha/beta hydrolase fold 2031 64.19 0 2295472..2296077 - 201 115360001 - Bamb_5257 - LuxR family transcriptional regulator 2032 63.81 0 2296127..2296651 - 174 115360002 - Bamb_5258 - V4R domain-containing protein 2033 65.48 0 2297687..2299033 - 448 115360003 - Bamb_5260 - major facilitator transporter 2034 59.20 -1 2299404..2300354 + 316 115360004 - Bamb_5261 - hypothetical protein 2035 68.25 0 2300514..2301713 + 399 115360005 - Bamb_5262 - aminotransferase, class I and II 2036 68.34 0 2302019..2302615 + 198 115360006 - Bamb_5263 - pyridoxamine 5'-phosphate oxidase-related, FMN-binding 2037 67.37 0 2302789..2304066 + 425 115360007 - Bamb_5264 - epocide hydrolase domain-containing protein 2038 66.86 0 2304379..2305419 + 346 115360008 - Bamb_5265 - alpha/beta hydrolase fold 2039 68.72 0 2305419..2305955 + 178 115360009 - Bamb_5266 - hypothetical protein 2040 70.76 0 2306233..2306574 + 113 115360010 - Bamb_5267 - hypothetical protein 2041 68.94 0 2306657..2307448 + 263 115360011 - Bamb_5268 - hypothetical protein 2042 69.94 0 2307555..2308958 + 467 115360012 - Bamb_5269 - amidase 2043 68.94 0 2309123..2309737 - 204 115360013 - Bamb_5270 - lysine exporter protein LysE/YggA 2044 66.54 0 2309900..2311540 - 546 115360014 groEL Bamb_5271 - chaperonin GroEL 2045 66.67 0 2311553..2311843 - 96 115360015 groES Bamb_5272 - co-chaperonin GroES 2046 56.03 -2 2312251..2312532 + 93 115360016 - Bamb_5273 - hypothetical protein 2047 59.76 -1 2312532..2312864 + 110 115360017 - Bamb_5274 - hypothetical protein 66.96 MEAN 4.07 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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