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Burkholderia cepacia AMMD chromosome 2, complete sequence - 1..2646969 2346 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1905 71.32 +1 2161630..2162982 + 450 115359875 - Bamb_5130 - pyridoxal-dependent decarboxylase 1906 61.54 -1 2163215..2163682 + 155 115359876 - Bamb_5131 - cupin 2 domain-containing protein 1907 70.80 0 2163752..2164573 + 273 115359877 - Bamb_5132 - short-chain dehydrogenase/reductase SDR 1908 68.37 0 2164679..2165500 - 273 115359878 - Bamb_5133 - stationary-phase survival protein SurE 1909 68.32 0 2165646..2165948 - 100 115359879 - Bamb_5134 - branched-chain amino acid transport 1910 68.70 0 2165938..2166675 - 245 115359880 - Bamb_5135 - AzlC family protein 1911 62.36 -1 2166725..2167258 + 177 115359881 - Bamb_5136 - AsnC family transcriptional regulator 1912 64.72 0 2167377..2168045 + 222 115359882 - Bamb_5137 - hypothetical protein 1913 68.60 0 2168195..2168920 + 241 115359883 - Bamb_5138 - hypothetical protein 1914 63.89 0 2169003..2169290 - 95 115359884 - Bamb_5139 - XRE family transcriptional regulator 1915 69.67 0 2169446..2170078 - 210 115359885 - Bamb_5140 - lysine exporter protein LysE/YggA 1916 70.14 0 2170280..2171143 - 287 115359886 - Bamb_5141 - hypothetical protein 1917 64.56 0 2171150..2171482 - 110 115359887 - Bamb_5142 - hypothetical protein 1918 68.81 0 2171700..2172026 + 108 115359888 - Bamb_5143 - hypothetical protein 1919 65.00 0 2172037..2172456 + 139 115359889 - Bamb_5144 - hypothetical protein 1920 66.67 0 2172511..2174322 - 603 115359890 - Bamb_5145 - periplasmic sensor hybrid histidine kinase 1921 64.87 0 2174332..2174832 - 166 115359891 - Bamb_5146 - oxidoreductase, molybdopterin binding 1922 66.44 0 2174894..2175787 - 297 115359892 - Bamb_5147 - response regulator receiver protein 1923 61.90 -1 2176144..2176731 + 195 115359893 - Bamb_5148 - Sel1 domain-containing protein 1924 69.32 0 2176854..2177681 + 275 115359894 - Bamb_5149 - hypothetical protein 1925 65.98 0 2177802..2178818 + 338 115359895 - Bamb_5150 - hypothetical protein 1926 69.53 0 2179199..2182267 + 1022 115359896 - Bamb_5151 - periplasmic sensor hybrid histidine kinase 1927 61.52 -1 2182919..2183578 + 219 115359897 - Bamb_5152 - two component LuxR family transcriptional regulator 1928 67.43 0 2183660..2186668 + 1002 115359898 - Bamb_5153 - multi-sensor hybrid histidine kinase 1929 70.18 0 2186674..2186901 + 75 115359899 - Bamb_5154 - hypothetical protein 1930 66.27 0 2187021..2188037 - 338 115359900 - Bamb_5155 - 1-aminocyclopropane-1-carboxylate deaminase 1931 64.27 0 2188235..2188735 + 166 115359901 - Bamb_5156 - AsnC family transcriptional regulator 1932 67.89 0 2189002..2190723 + 573 115359902 - Bamb_5157 - pyruvate dehydrogenase 1933 67.97 0 2190720..2191025 + 101 115359903 - Bamb_5158 - hypothetical protein 1934 70.39 0 2191181..2191771 + 196 115359904 - Bamb_5159 - methyltransferase type 11 1935 66.67 0 2191829..2192965 - 378 115359905 - Bamb_5160 - acyltransferase 3 1936 70.19 0 2193420..2193986 + 188 115359906 - Bamb_5161 - hypothetical protein 1937 67.01 0 2194017..2194892 - 291 115359907 - Bamb_5162 - LysR family transcriptional regulator 1938 67.80 0 2195056..2196381 + 441 115359908 - Bamb_5163 - uncharacterized membrane-anchored protein 1939 59.20 -1 2196412..2196612 + 66 115359909 - Bamb_5164 - hypothetical protein 1940 54.78 -2 2196658..2197128 - 156 115359910 - Bamb_5165 - hypothetical protein 1941 53.91 -2 2197146..2197631 - 161 115359911 - Bamb_5166 - hypothetical protein 1942 67.13 0 2198142..2198576 + 144 115359912 - Bamb_5167 - GCN5-related N-acetyltransferase 1943 67.11 0 2198592..2199488 - 298 115359913 - Bamb_5168 - LysR family transcriptional regulator 1944 68.19 0 2199611..2200399 + 262 115359914 - Bamb_5169 - trans-aconitate 2-methyltransferase 1945 69.54 0 2200442..2201032 - 196 115359915 - Bamb_5170 - GCN5-related N-acetyltransferase 1946 65.93 0 2201569..2201973 + 134 115359916 - Bamb_5171 - hypothetical protein 1947 67.62 0 2202212..2203048 - 278 115359917 - Bamb_5172 - LuxR family transcriptional regulator 1948 65.68 0 2203132..2203536 - 134 115359918 - Bamb_5173 - hypothetical protein 1949 68.79 0 2203533..2204942 - 469 115359919 - Bamb_5174 - major facilitator transporter 1950 67.60 0 2205137..2205997 - 286 115359920 - Bamb_5175 - hypothetical protein 1951 60.81 -1 2206046..2206438 - 130 115359921 - Bamb_5176 - hypothetical protein 1952 66.95 0 2206435..2206791 - 118 115359922 - Bamb_5177 - HxlR family transcriptional regulator 1953 66.67 0 2206932..2207567 + 211 115359923 - Bamb_5178 - glutathione S-transferase domain-containing protein 1954 63.78 0 2207646..2208026 + 126 115359924 - Bamb_5179 - hypothetical protein 1955 69.61 0 2208118..2209410 + 430 115359925 - Bamb_5180 - outer membrane efflux protein 1956 69.50 0 2209422..2210939 + 505 115359926 - Bamb_5181 - RND family efflux transporter MFP subunit 1957 68.38 0 2210936..2214142 + 1068 115359927 - Bamb_5182 - CzcA family heavy metal efflux protein 1958 65.03 0 2214139..2214504 + 121 115359928 - Bamb_5183 - RND family efflux transporter MFP subunit 1959 67.06 0 2214628..2215638 - 336 115359929 - Bamb_5184 - sodium/calcium exchanger membrane region 1960 69.42 0 2216032..2217447 - 471 115359930 - Bamb_5185 - heavy metal sensor signal transduction histidine kinase 1961 64.88 0 2217444..2218115 - 223 115359931 - Bamb_5186 - two component heavy metal response transcriptional regulator 1962 67.03 0 2218226..2218780 + 184 115359932 - Bamb_5187 - hypothetical protein 1963 71.38 +1 2218875..2219171 + 98 115359933 - Bamb_5188 - hypothetical protein 1964 69.66 0 2219168..2220739 + 523 115359934 - Bamb_5189 - outer membrane efflux protein 1965 67.82 0 2220741..2222036 + 431 115359935 - Bamb_5190 - multicopper oxidase, type 2; multicopper oxidase, type 3 1966 63.25 0 2222116..2222466 + 116 115359936 - Bamb_5191 - hypothetical protein 1967 68.69 0 2222481..2222876 + 131 115359937 - Bamb_5192 - copper resistance protein CopC 1968 71.34 +1 2222873..2223814 + 313 115359938 - Bamb_5193 - copper resistance D domain-containing protein 1969 68.48 0 2224012..2225826 + 604 115359939 - Bamb_5194 - endonuclease/exonuclease/phosphatase 1970 66.40 0 2226633..2228483 + 616 115359940 - Bamb_5195 - peptidase S10, serine carboxypeptidase 1971 66.20 0 2228528..2228956 + 142 115359941 - Bamb_5196 - hypothetical protein 1972 68.27 0 2229119..2230117 - 332 115359942 - Bamb_5197 - AraC family transcriptional regulator 1973 64.98 0 2230323..2231570 + 415 115359943 - Bamb_5198 - FAD-linked oxidoreductase 1974 66.54 0 2231604..2232383 + 259 115359944 - Bamb_5199 - short-chain dehydrogenase/reductase SDR 1975 64.18 0 2232705..2233952 + 415 115359945 - Bamb_5200 - serine hydroxymethyltransferase 1976 64.28 0 2234102..2235694 - 530 115359946 - Bamb_5201 - amino acid permease-associated region 1977 69.43 0 2236397..2237881 - 494 115359947 - Bamb_5203 - aminotransferase, class V 1978 62.76 -1 2238146..2238478 - 110 115359948 - Bamb_5204 - hypothetical protein 1979 62.40 -1 2238479..2238736 - 85 115359949 - Bamb_5205 - PAAR repeat-containing protein 1980 59.51 -1 2238803..2240143 - 446 115359950 - Bamb_5206 - hypothetical protein 1981 60.25 -1 2240363..2241703 - 446 115359951 - Bamb_5207 - hypothetical protein 1982 59.49 -1 2241838..2244150 - 770 115359952 - Bamb_5208 - putative transmembrane protein 1983 64.97 0 2244169..2246937 - 922 115359953 - Bamb_5209 - Rhs element Vgr protein 1984 68.67 0 2247683..2248933 + 416 115359954 - Bamb_5210 - major facilitator transporter 1985 65.16 0 2249080..2250009 + 309 115359955 - Bamb_5211 - LysR family transcriptional regulator 1986 65.45 0 2250124..2250618 + 164 115359956 - Bamb_5212 - hypothetical protein 1987 64.51 0 2250662..2251681 + 339 115359957 - Bamb_5213 - hypothetical protein 1988 67.69 0 2251714..2253180 + 488 115359958 - Bamb_5214 - betaine-aldehyde dehydrogenase 1989 71.63 +1 2253188..2254255 + 355 115359959 - Bamb_5215 - iron-containing alcohol dehydrogenase 1990 65.64 0 2254284..2255156 + 290 115359960 - Bamb_5216 - intradiol ring-cleavage dioxygenase 1991 66.99 0 2255162..2255473 + 103 115359961 - Bamb_5217 - YCII-related 1992 67.26 0 2255477..2255812 + 111 115359962 - Bamb_5218 - Rieske (2Fe-2S) domain-containing protein 1993 61.98 -1 2256047..2257135 + 362 115359963 - Bamb_5219 - porin 1994 67.27 0 2257208..2257867 - 219 115359964 - Bamb_5220 - glutathione S-transferase domain-containing protein 1995 66.33 0 2257910..2258803 + 297 115359965 - Bamb_5221 - AraC family transcriptional regulator 1996 63.95 0 2259105..2259878 + 257 115359966 - Bamb_5222 - hypothetical protein 1997 56.67 -2 2259975..2260544 - 189 115359967 - Bamb_5223 - hypothetical protein 1998 57.11 -2 2260974..2264144 + 1056 115359968 - Bamb_5224 - DNA helicase related protein 1999 59.01 -1 2264185..2265072 + 295 115359969 - Bamb_5225 - hypothetical protein 2000 58.02 -2 2265966..2267156 - 396 115359970 - Bamb_5226 - hypothetical protein 2001 64.81 0 2267445..2269274 - 609 115359971 - Bamb_5227 - glucosamine--fructose-6-phosphate aminotransferase, isomerizing 2002 68.29 0 2269431..2269922 + 163 115359972 - Bamb_5228 - AsnC family transcriptional regulator 2003 68.30 0 2269952..2270806 - 284 115359973 - Bamb_5229 - 3-methyl-2-oxobutanoate hydroxymethyltransferase 2004 68.38 0 2270884..2271702 + 272 115359974 - Bamb_5230 - AraC family transcriptional regulator 66.96 MEAN 4.07 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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