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Burkholderia cepacia AMMD chromosome 2, complete sequence - 1..2646969 2346 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1783 67.33 0 2028799..2029548 - 249 115359753 - Bamb_5008 - Crp/FNR family transcriptional regulator 1784 67.30 0 2029696..2030166 - 156 115359754 - Bamb_5009 - UspA domain-containing protein 1785 68.61 0 2030770..2031180 - 136 115359755 - Bamb_5010 - hypothetical protein 1786 64.53 0 2031459..2031692 + 77 115359756 - Bamb_5011 - hypothetical protein 1787 67.43 0 2031836..2032756 + 306 115359757 - Bamb_5012 - Serine O-acetyltransferase 1788 68.66 0 2032789..2033592 - 267 115359758 - Bamb_5013 - short-chain dehydrogenase/reductase SDR 1789 64.29 0 2033592..2034221 - 209 115359759 folE Bamb_5014 - GTP cyclohydrolase I 1790 69.47 0 2034323..2035249 - 308 115359760 - Bamb_5015 - LysR family transcriptional regulator 1791 67.40 0 2035366..2036598 + 410 115359761 - Bamb_5016 - 4-hydroxybenzoate 3-monooxygenase 1792 66.67 0 2036743..2037459 + 238 115359762 - Bamb_5017 - 3-oxoacid CoA-transferase, A subunit 1793 65.60 0 2037479..2038135 + 218 115359763 - Bamb_5018 - 3-oxoacid CoA-transferase, B subunit 1794 72.23 +1 2038224..2039606 + 460 115359764 - Bamb_5019 - 3-carboxy-cis,cis-muconate cycloisomerase 1795 69.08 0 2039606..2040391 + 261 115359765 - Bamb_5020 - 3-oxoadipate enol-lactonase 1796 65.12 0 2040402..2040788 + 128 115359766 - Bamb_5021 - 4-carboxymuconolactone decarboxylase 1797 66.67 0 2040986..2042344 + 452 115359767 - Bamb_5022 - major facilitator transporter 1798 63.33 0 2042468..2042707 - 79 115359768 - Bamb_5023 - hypothetical protein 1799 65.53 0 2042824..2043441 - 205 115359769 - Bamb_5024 - lysine exporter protein LysE/YggA 1800 60.67 -1 2043586..2044119 - 177 115359770 - Bamb_5025 - endoribonuclease L-PSP 1801 65.29 0 2044116..2045348 - 410 115359771 - Bamb_5026 - acyl-CoA dehydrogenase type 2 1802 59.84 -1 2045348..2046358 - 336 115359772 - Bamb_5027 - hypothetical protein 1803 63.12 0 2046382..2047905 - 507 115359773 - Bamb_5028 - AMP-dependent synthetase and ligase 1804 61.83 -1 2047895..2049115 - 406 115359774 - Bamb_5029 - major facilitator transporter 1805 58.66 -2 2049223..2049609 - 128 115359775 ectC Bamb_5030 - L-ectoine synthase 1806 64.14 0 2050214..2051122 - 302 115359776 - Bamb_5031 - LysR family transcriptional regulator 1807 66.67 0 2051244..2051957 + 237 115359777 - Bamb_5032 - ThiJ/PfpI domain-containing protein 1808 62.16 -1 2051979..2052821 + 280 115359778 - Bamb_5033 - ThiJ/PfpI domain-containing protein 1809 63.02 0 2052879..2053673 + 264 115359779 - Bamb_5034 - short-chain dehydrogenase/reductase SDR 1810 60.14 -1 2053688..2053978 + 96 115359780 - Bamb_5035 - antibiotic biosynthesis monooxygenase 1811 62.68 -1 2054009..2055211 + 400 115359781 - Bamb_5036 - hypothetical protein 1812 47.09 -2 2055658..2056224 + 188 115359782 - Bamb_5037 - acetyltransferase, including N-acetylases of ribosomal protein 1813 56.59 -2 2056754..2057140 + 128 115359783 - Bamb_5038 - hypothetical protein 1814 58.81 -2 2057528..2058736 + 402 115359784 - Bamb_5039 - tRNA synthetase, class II (G, H, P and S) 1815 57.83 -2 2058930..2059619 + 229 115359785 - Bamb_5040 - LuxR family transcriptional regulator 1816 58.61 -2 2059897..2060616 + 239 115359786 - Bamb_5041 - hypothetical protein 1817 60.22 -1 2060613..2061542 + 309 115359787 - Bamb_5042 - fatty acid desaturase 1818 61.14 -1 2061535..2062908 + 457 115359788 - Bamb_5043 - hypothetical protein 1819 61.72 -1 2062913..2064124 + 403 115359789 - Bamb_5044 - major facilitator transporter 1820 61.47 -1 2064121..2065275 + 384 115359790 - Bamb_5045 - Cys/Met metabolism pyridoxal-phosphate-dependent enzymes 1821 54.13 -2 2065325..2065699 + 124 115359791 - Bamb_5046 - glutathione-dependent formaldehyde-activating, GFA 1822 60.93 -1 2065710..2066615 + 301 115359792 - Bamb_5047 - peptidase C26 1823 58.33 -2 2067874..2068425 + 183 115359793 - Bamb_5048 - hypothetical protein 1824 62.22 -1 2068457..2068771 + 104 115359794 - Bamb_5049 - blue (type1) copper domain-containing protein 1825 65.67 0 2068768..2069472 + 234 115359795 - Bamb_5050 - RNA polymerase sigma factor 1826 65.38 0 2069496..2070275 - 259 115359796 - Bamb_5051 - PGAP1 family protein 1827 67.01 0 2070272..2071426 - 384 115359797 - Bamb_5052 - hypothetical protein 1828 65.99 0 2071616..2072794 - 392 115359798 - Bamb_5053 - chromate transporter 1829 67.08 0 2072791..2073768 - 325 115359799 - Bamb_5054 - chromate resistance exported protein 1830 59.34 -1 2073943..2074215 + 90 115359800 - Bamb_5055 - hypothetical protein 1831 65.89 0 2074227..2075507 + 426 115359801 - Bamb_5056 - cation diffusion facilitator family transporter 1832 66.67 0 2075510..2075848 + 112 115359802 - Bamb_5057 - hypothetical protein 1833 64.34 0 2075820..2077967 - 715 115359803 - Bamb_5058 - TonB-dependent siderophore receptor 1834 68.41 0 2078279..2079484 + 401 115359804 - Bamb_5059 - major facilitator transporter 1835 65.82 0 2079817..2081121 + 434 115359805 - Bamb_5060 - sodium:dicarboxylate symporter 1836 60.40 -1 2081408..2082460 - 350 115359806 - Bamb_5061 - IS605 family transposase OrfB 1837 67.08 0 2082609..2084543 + 644 115359807 - Bamb_5062 - hypothetical protein 1838 67.29 0 2084814..2087699 + 961 115359808 - Bamb_5063 - putative lipoprotein 1839 64.00 0 2087787..2088236 - 149 115359809 - Bamb_5064 - GCN5-related N-acetyltransferase 1840 64.05 0 2088302..2089258 - 318 115359810 - Bamb_5065 - hypothetical protein 1841 70.38 0 2089461..2090483 - 340 115359811 - Bamb_5066 - MerR family transcriptional regulator 1842 72.40 +1 2090556..2091497 - 313 115359812 - Bamb_5067 - amidohydrolase 2 1843 66.35 0 2091475..2092422 - 315 115359813 - Bamb_5068 - hypothetical protein 1844 67.67 0 2092469..2093761 - 430 115359814 - Bamb_5069 - major facilitator transporter 1845 70.15 0 2093857..2094774 - 305 115359815 - Bamb_5070 - dihydrodipicolinate synthetase 1846 63.26 0 2094783..2095955 - 390 115359816 - Bamb_5071 - mandelate racemase/muconate lactonizing protein 1847 72.21 +1 2096006..2097052 - 348 115359817 pdxA Bamb_5072 - 4-hydroxythreonine-4-phosphate dehydrogenase 1848 70.03 0 2097208..2098158 + 316 115359818 - Bamb_5073 - LysR family transcriptional regulator 1849 71.14 +1 2098225..2098470 - 81 115359819 - Bamb_5074 - hypothetical protein 1850 68.99 0 2098451..2099743 - 430 115359820 - Bamb_5075 - major facilitator transporter 1851 56.30 -2 2100148..2100417 - 89 115359821 - Bamb_5076 - hypothetical protein 1852 68.35 0 2100474..2101184 + 236 115359822 - Bamb_5077 - phosphoglycerate mutase 1853 68.34 0 2101162..2102235 + 357 115359823 - Bamb_5078 - aminoglycoside phosphotransferase 1854 65.90 0 2102268..2103050 + 260 115359824 - Bamb_5079 - short chain dehydrogenase 1855 69.70 0 2103058..2103816 + 252 115359825 - Bamb_5080 - short-chain dehydrogenase/reductase SDR 1856 67.55 0 2103850..2105094 + 414 115359826 - Bamb_5081 - acyl-CoA dehydrogenase domain-containing protein 1857 66.34 0 2105458..2106363 + 301 115359827 - Bamb_5082 - LysR family transcriptional regulator 1858 63.90 0 2106401..2107519 - 372 115359828 - Bamb_5083 - heat shock protein DnaJ domain-containing protein 1859 67.09 0 2107782..2110148 - 788 115359829 - Bamb_5084 - DNA polymerase II 1860 66.92 0 2110236..2111828 - 530 115359830 - Bamb_5085 - PAS/PAC sensor hybrid histidine kinase 1861 66.06 0 2112002..2113642 - 546 115359831 - Bamb_5086 - diguanylate phosphodiesterase 1862 66.00 0 2114098..2114397 - 99 115359832 - Bamb_5087 - hypothetical protein 1863 65.73 0 2114456..2114989 + 177 115359833 - Bamb_5088 - alginate regulatory protein AlgR3 1864 66.61 0 2114994..2116616 - 540 115359834 - Bamb_5089 - histidine acid phosphatase 1865 65.52 0 2116802..2117236 - 144 115359835 - Bamb_5090 - hypothetical protein 1866 70.57 0 2117553..2118911 - 452 115359836 - Bamb_5091 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase 1867 67.09 0 2119012..2119965 + 317 115359837 - Bamb_5092 - LysR family transcriptional regulator 1868 70.20 0 2120395..2121300 + 301 115359838 - Bamb_5093 - AraC family transcriptional regulator 1869 68.47 0 2121584..2122471 + 295 115359839 - Bamb_5094 - NmrA family protein 1870 67.50 0 2122506..2123708 - 400 115359840 - Bamb_5095 - benzoate transporter 1871 67.64 0 2123933..2124958 - 341 115359841 - Bamb_5096 - fatty acid desaturase 1872 69.21 0 2125265..2126089 + 274 115359842 - Bamb_5097 - ABC phosphate/phosphonate transporter, periplasmic ligand binding protein 1873 67.88 0 2126130..2127527 - 465 115359843 - Bamb_5098 - ATP-dependent RNA helicase DbpA 1874 68.28 0 2127524..2127832 - 102 115359844 - Bamb_5099 - hypothetical protein 1875 65.06 0 2128198..2129880 - 560 162389968 - Bamb_5100 - malate:quinone oxidoreductase 1876 63.33 0 2130027..2130326 - 99 115359846 - Bamb_5101 - hypothetical protein 1877 65.69 0 2130367..2130672 - 101 115359847 - Bamb_5102 - hypothetical protein 1878 64.62 0 2130741..2131229 - 162 115359848 - Bamb_5103 - AsnC family transcriptional regulator 1879 71.10 +1 2131355..2132392 + 345 115359849 - Bamb_5104 - histone deacetylase superfamily protein 1880 67.80 0 2132462..2133607 + 381 115359850 - Bamb_5105 - extracellular ligand-binding receptor 1881 67.12 0 2133657..2134535 - 292 115359851 - Bamb_5106 - MscS mechanosensitive ion channel 1882 72.54 +1 2135200..2136237 + 345 115359852 - Bamb_5107 - peptidase M23B 66.96 MEAN 4.07 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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