version 1.0
Burkholderia cepacia AMMD chromosome 2, complete sequence - 1..2646969 2346 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1737 70.18 0 1978344..1978571 + 75 115359707 - Bamb_4962 - hypothetical protein 1738 74.80 +1 1978605..1978973 + 122 115359708 - Bamb_4963 - hypothetical protein 1739 63.89 0 1979067..1979426 - 119 115359709 - Bamb_4964 - arsenate reductase 1740 60.94 -1 1980429..1981091 + 220 115359710 - Bamb_4965 - cobyrinic acid a,c-diamide synthase 1741 63.09 0 1981115..1982176 + 353 115359711 - Bamb_4966 - parB-like partition proteins 1742 64.41 0 1982267..1983730 - 487 115359712 - Bamb_4967 - hypothetical protein 1743 64.04 0 1985444..1986625 + 393 115359713 - Bamb_4968 - hypothetical protein 1744 65.09 0 1986766..1987779 - 337 115359714 - Bamb_4969 - phage integrase family protein 1745 65.08 0 1987882..1988259 - 125 115359715 - Bamb_4970 - hypothetical protein 1746 69.93 0 1988387..1988998 - 203 115359716 - Bamb_4971 - XRE family transcriptional regulator 1747 67.33 0 1989160..1990359 + 399 115359717 - Bamb_4972 - 2-amino-3-ketobutyrate coenzyme A ligase 1748 63.75 0 1990373..1991401 + 342 115359718 tdh Bamb_4973 - L-threonine 3-dehydrogenase 1749 66.83 0 1992128..1992742 + 204 115359719 - Bamb_4974 - TetR family transcriptional regulator 1750 64.58 0 1992798..1993277 + 159 115359720 - Bamb_4975 - hypothetical protein 1751 67.31 0 1993776..1994861 - 361 115359721 - Bamb_4976 - tartrate dehydrogenase 1752 69.37 0 1994979..1995902 + 307 115359722 - Bamb_4977 - LysR family transcriptional regulator 1753 68.25 0 1996062..1997009 - 315 115359723 - Bamb_4978 - N-acetyl-gamma-glutamyl-phosphate reductase 1754 71.07 +1 1997129..1998013 + 294 115359724 - Bamb_4979 - LysR family transcriptional regulator 1755 67.74 0 1998182..1998646 - 154 115359725 - Bamb_4980 - hypothetical protein 1756 66.67 0 1998707..1999924 - 405 115359726 - Bamb_4981 - patatin 1757 64.38 0 2000055..2000840 - 261 115359727 - Bamb_4982 - 3-hydroxybutyrate dehydrogenase 1758 62.75 -1 2000892..2001632 - 246 115359728 - Bamb_4983 - acetoacetate decarboxylase 1759 69.59 0 2002079..2002660 + 193 115359729 - Bamb_4984 - phosphoesterase, PA-phosphatase related 1760 62.67 -1 2002699..2002923 - 74 115359730 - Bamb_4985 - hypothetical protein 1761 70.19 0 2003043..2003864 - 273 115359731 - Bamb_4986 - FAD-binding 9, siderophore-interacting domain-containing protein 1762 69.61 0 2003902..2004615 - 237 115359732 - Bamb_4987 - PadR-like family transcriptional regulator 1763 69.76 0 2005426..2006427 + 333 115359733 - Bamb_4988 - FHA domain-containing protein 1764 71.19 +1 2006424..2010470 + 1348 115359734 - Bamb_4989 - serine/threonine protein kinase 1765 58.84 -1 2010504..2010848 + 114 115359735 - Bamb_4990 - hypothetical protein 1766 60.61 -1 2010865..2011227 + 120 115359736 - Bamb_4991 - hypothetical protein 1767 68.72 0 2011322..2013559 + 745 115359737 - Bamb_4992 - hypothetical protein 1768 59.38 -1 2013686..2014261 - 191 115359738 - Bamb_4993 - hypothetical protein 1769 63.64 0 2014542..2014673 + 43 115359739 - Bamb_4994 - betaine-aldehyde dehydrogenase 1770 65.19 0 2014860..2015810 - 316 115359740 - Bamb_4995 - AraC family transcriptional regulator 1771 63.16 0 2015912..2016139 - 75 115359741 - Bamb_4996 - hypothetical protein 1772 67.73 0 2016196..2017794 + 532 115359742 - Bamb_4997 - glucose-methanol-choline oxidoreductase 1773 66.06 0 2017836..2019323 + 495 115359743 - Bamb_4998 - aldehyde dehydrogenase 1774 66.76 0 2019393..2020484 - 363 115359744 - Bamb_4999 - outer membrane protein (porin) 1775 71.32 +1 2020696..2021340 - 214 115359745 - Bamb_5000 - dehydrogenases with different specificities-like protein 1776 71.39 +1 2021395..2022516 - 373 115359746 - Bamb_5001 - alcohol dehydrogenase 1777 69.12 0 2022518..2023819 - 433 115359747 - Bamb_5002 - major facilitator transporter 1778 61.05 -1 2023838..2024371 - 177 115359748 - Bamb_5003 - cupin 2 domain-containing protein 1779 69.05 0 2024559..2025524 + 321 115359749 - Bamb_5004 - AraC family transcriptional regulator 1780 66.88 0 2025787..2026734 - 315 115359750 - Bamb_5005 - aldo/keto reductase 1781 67.31 0 2027109..2027729 - 206 115359751 - Bamb_5006 - lysine exporter protein LysE/YggA 1782 68.90 0 2027836..2028729 + 297 115359752 - Bamb_5007 - chromosome replication initiation inhibitor protein 1783 67.33 0 2028799..2029548 - 249 115359753 - Bamb_5008 - Crp/FNR family transcriptional regulator 1784 67.30 0 2029696..2030166 - 156 115359754 - Bamb_5009 - UspA domain-containing protein 1785 68.61 0 2030770..2031180 - 136 115359755 - Bamb_5010 - hypothetical protein 1786 64.53 0 2031459..2031692 + 77 115359756 - Bamb_5011 - hypothetical protein 1787 67.43 0 2031836..2032756 + 306 115359757 - Bamb_5012 - Serine O-acetyltransferase 1788 68.66 0 2032789..2033592 - 267 115359758 - Bamb_5013 - short-chain dehydrogenase/reductase SDR 1789 64.29 0 2033592..2034221 - 209 115359759 folE Bamb_5014 - GTP cyclohydrolase I 1790 69.47 0 2034323..2035249 - 308 115359760 - Bamb_5015 - LysR family transcriptional regulator 1791 67.40 0 2035366..2036598 + 410 115359761 - Bamb_5016 - 4-hydroxybenzoate 3-monooxygenase 1792 66.67 0 2036743..2037459 + 238 115359762 - Bamb_5017 - 3-oxoacid CoA-transferase, A subunit 1793 65.60 0 2037479..2038135 + 218 115359763 - Bamb_5018 - 3-oxoacid CoA-transferase, B subunit 1794 72.23 +1 2038224..2039606 + 460 115359764 - Bamb_5019 - 3-carboxy-cis,cis-muconate cycloisomerase 1795 69.08 0 2039606..2040391 + 261 115359765 - Bamb_5020 - 3-oxoadipate enol-lactonase 1796 65.12 0 2040402..2040788 + 128 115359766 - Bamb_5021 - 4-carboxymuconolactone decarboxylase 1797 66.67 0 2040986..2042344 + 452 115359767 - Bamb_5022 - major facilitator transporter 1798 63.33 0 2042468..2042707 - 79 115359768 - Bamb_5023 - hypothetical protein 1799 65.53 0 2042824..2043441 - 205 115359769 - Bamb_5024 - lysine exporter protein LysE/YggA 1800 60.67 -1 2043586..2044119 - 177 115359770 - Bamb_5025 - endoribonuclease L-PSP 1801 65.29 0 2044116..2045348 - 410 115359771 - Bamb_5026 - acyl-CoA dehydrogenase type 2 1802 59.84 -1 2045348..2046358 - 336 115359772 - Bamb_5027 - hypothetical protein 1803 63.12 0 2046382..2047905 - 507 115359773 - Bamb_5028 - AMP-dependent synthetase and ligase 1804 61.83 -1 2047895..2049115 - 406 115359774 - Bamb_5029 - major facilitator transporter 1805 58.66 -2 2049223..2049609 - 128 115359775 ectC Bamb_5030 - L-ectoine synthase 1806 64.14 0 2050214..2051122 - 302 115359776 - Bamb_5031 - LysR family transcriptional regulator 1807 66.67 0 2051244..2051957 + 237 115359777 - Bamb_5032 - ThiJ/PfpI domain-containing protein 1808 62.16 -1 2051979..2052821 + 280 115359778 - Bamb_5033 - ThiJ/PfpI domain-containing protein 1809 63.02 0 2052879..2053673 + 264 115359779 - Bamb_5034 - short-chain dehydrogenase/reductase SDR 1810 60.14 -1 2053688..2053978 + 96 115359780 - Bamb_5035 - antibiotic biosynthesis monooxygenase 1811 62.68 -1 2054009..2055211 + 400 115359781 - Bamb_5036 - hypothetical protein 1812 47.09 -2 2055658..2056224 + 188 115359782 - Bamb_5037 - acetyltransferase, including N-acetylases of ribosomal protein 1813 56.59 -2 2056754..2057140 + 128 115359783 - Bamb_5038 - hypothetical protein 1814 58.81 -2 2057528..2058736 + 402 115359784 - Bamb_5039 - tRNA synthetase, class II (G, H, P and S) 1815 57.83 -2 2058930..2059619 + 229 115359785 - Bamb_5040 - LuxR family transcriptional regulator 1816 58.61 -2 2059897..2060616 + 239 115359786 - Bamb_5041 - hypothetical protein 1817 60.22 -1 2060613..2061542 + 309 115359787 - Bamb_5042 - fatty acid desaturase 1818 61.14 -1 2061535..2062908 + 457 115359788 - Bamb_5043 - hypothetical protein 1819 61.72 -1 2062913..2064124 + 403 115359789 - Bamb_5044 - major facilitator transporter 1820 61.47 -1 2064121..2065275 + 384 115359790 - Bamb_5045 - Cys/Met metabolism pyridoxal-phosphate-dependent enzymes 1821 54.13 -2 2065325..2065699 + 124 115359791 - Bamb_5046 - glutathione-dependent formaldehyde-activating, GFA 1822 60.93 -1 2065710..2066615 + 301 115359792 - Bamb_5047 - peptidase C26 1823 58.33 -2 2067874..2068425 + 183 115359793 - Bamb_5048 - hypothetical protein 1824 62.22 -1 2068457..2068771 + 104 115359794 - Bamb_5049 - blue (type1) copper domain-containing protein 1825 65.67 0 2068768..2069472 + 234 115359795 - Bamb_5050 - RNA polymerase sigma factor 1826 65.38 0 2069496..2070275 - 259 115359796 - Bamb_5051 - PGAP1 family protein 1827 67.01 0 2070272..2071426 - 384 115359797 - Bamb_5052 - hypothetical protein 1828 65.99 0 2071616..2072794 - 392 115359798 - Bamb_5053 - chromate transporter 1829 67.08 0 2072791..2073768 - 325 115359799 - Bamb_5054 - chromate resistance exported protein 1830 59.34 -1 2073943..2074215 + 90 115359800 - Bamb_5055 - hypothetical protein 1831 65.89 0 2074227..2075507 + 426 115359801 - Bamb_5056 - cation diffusion facilitator family transporter 1832 66.67 0 2075510..2075848 + 112 115359802 - Bamb_5057 - hypothetical protein 1833 64.34 0 2075820..2077967 - 715 115359803 - Bamb_5058 - TonB-dependent siderophore receptor 1834 68.41 0 2078279..2079484 + 401 115359804 - Bamb_5059 - major facilitator transporter 1835 65.82 0 2079817..2081121 + 434 115359805 - Bamb_5060 - sodium:dicarboxylate symporter 1836 60.40 -1 2081408..2082460 - 350 115359806 - Bamb_5061 - IS605 family transposase OrfB 66.96 MEAN 4.07 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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