version 1.0
Burkholderia cepacia AMMD chromosome 2, complete sequence - 1..2646969 2346 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1707 65.71 0 1942903..1944162 + 419 115359677 - Bamb_4932 - extracellular solute-binding protein 1708 66.46 0 1944223..1945167 + 314 115359678 - Bamb_4933 - binding-protein-dependent transport systems inner membrane component 1709 62.44 -1 1945185..1946036 + 283 115359679 - Bamb_4934 - binding-protein-dependent transport systems inner membrane component 1710 66.67 0 1946223..1947344 + 373 115359680 - Bamb_4935 - filamentation induced by cAMP protein Fic 1711 69.44 0 1947439..1948917 - 492 115359681 - Bamb_4936 - 2-nitropropane dioxygenase, NPD 1712 64.98 0 1949113..1949883 - 256 115359682 - Bamb_4937 - DNA-binding transcriptional regulator GlcC 1713 69.13 0 1950107..1951606 + 499 115359683 - Bamb_4938 - glycolate oxidase subunit GlcD 1714 73.59 +1 1951606..1952688 + 360 115359684 glcE Bamb_4939 - glycolate oxidase FAD binding subunit 1715 71.42 +1 1952713..1953933 + 406 115359685 glcF Bamb_4940 - glycolate oxidase iron-sulfur subunit 1716 69.63 0 1953956..1954360 + 134 115359686 - Bamb_4941 - hypothetical protein 1717 68.41 0 1954397..1956571 + 724 115359687 - Bamb_4942 - malate synthase G 1718 62.32 -1 1956650..1956994 - 114 115359688 - Bamb_4943 - hypothetical protein 1719 67.75 0 1957058..1958620 + 520 115359689 - Bamb_4944 - diguanylate cyclase 1720 69.42 0 1958754..1960133 + 459 115359690 - Bamb_4945 - periplasmic sensor signal transduction histidine kinase 1721 69.15 0 1960165..1960809 + 214 115359691 - Bamb_4946 - two component LuxR family transcriptional regulator 1722 64.06 0 1960920..1961570 - 216 115359692 - Bamb_4947 - toluene tolerance family protein 1723 69.63 0 1961847..1964480 + 877 115359693 - Bamb_4948 - RND efflux transporter 1724 69.45 0 1964473..1965477 + 334 115359694 - Bamb_4949 - VacJ family lipoprotein 1725 76.27 +2 1965589..1966296 - 235 115359695 - Bamb_4950 - hypothetical protein 1726 68.24 0 1966300..1968273 - 657 115359696 - Bamb_4951 - squalene-hopene cyclase 1727 73.44 +1 1968289..1969542 - 417 115359697 - Bamb_4952 - amine oxidase 1728 69.49 0 1969547..1970395 - 282 115359698 - Bamb_4953 - squalene/phytoene synthase 1729 69.07 0 1970656..1970988 - 110 115359699 - Bamb_4954 - hypothetical protein 1730 69.83 0 1971207..1972091 + 294 115359700 - Bamb_4955 - esterase 1731 68.10 0 1972136..1973110 - 324 115359701 - Bamb_4956 - diguanylate cyclase with PAS/PAC sensor 1732 66.04 0 1973107..1973742 - 211 115359702 - Bamb_4957 - CheC, inhibitor of MCP methylation 1733 59.08 -1 1973726..1974094 - 122 115359703 - Bamb_4958 - response regulator receiver protein 1734 67.96 0 1974561..1976801 + 746 115359704 - Bamb_4959 - periplasmic sensor hybrid histidine kinase 1735 65.95 0 1976847..1977401 - 184 115359705 - Bamb_4960 - NADPH-dependent FMN reductase 1736 64.32 0 1977767..1978363 + 198 115359706 - Bamb_4961 - RNA polymerase sigma factor 1737 70.18 0 1978344..1978571 + 75 115359707 - Bamb_4962 - hypothetical protein 1738 74.80 +1 1978605..1978973 + 122 115359708 - Bamb_4963 - hypothetical protein 1739 63.89 0 1979067..1979426 - 119 115359709 - Bamb_4964 - arsenate reductase 1740 60.94 -1 1980429..1981091 + 220 115359710 - Bamb_4965 - cobyrinic acid a,c-diamide synthase 1741 63.09 0 1981115..1982176 + 353 115359711 - Bamb_4966 - parB-like partition proteins 1742 64.41 0 1982267..1983730 - 487 115359712 - Bamb_4967 - hypothetical protein 1743 64.04 0 1985444..1986625 + 393 115359713 - Bamb_4968 - hypothetical protein 1744 65.09 0 1986766..1987779 - 337 115359714 - Bamb_4969 - phage integrase family protein 1745 65.08 0 1987882..1988259 - 125 115359715 - Bamb_4970 - hypothetical protein 1746 69.93 0 1988387..1988998 - 203 115359716 - Bamb_4971 - XRE family transcriptional regulator 1747 67.33 0 1989160..1990359 + 399 115359717 - Bamb_4972 - 2-amino-3-ketobutyrate coenzyme A ligase 1748 63.75 0 1990373..1991401 + 342 115359718 tdh Bamb_4973 - L-threonine 3-dehydrogenase 1749 66.83 0 1992128..1992742 + 204 115359719 - Bamb_4974 - TetR family transcriptional regulator 1750 64.58 0 1992798..1993277 + 159 115359720 - Bamb_4975 - hypothetical protein 1751 67.31 0 1993776..1994861 - 361 115359721 - Bamb_4976 - tartrate dehydrogenase 1752 69.37 0 1994979..1995902 + 307 115359722 - Bamb_4977 - LysR family transcriptional regulator 1753 68.25 0 1996062..1997009 - 315 115359723 - Bamb_4978 - N-acetyl-gamma-glutamyl-phosphate reductase 1754 71.07 +1 1997129..1998013 + 294 115359724 - Bamb_4979 - LysR family transcriptional regulator 1755 67.74 0 1998182..1998646 - 154 115359725 - Bamb_4980 - hypothetical protein 1756 66.67 0 1998707..1999924 - 405 115359726 - Bamb_4981 - patatin 1757 64.38 0 2000055..2000840 - 261 115359727 - Bamb_4982 - 3-hydroxybutyrate dehydrogenase 1758 62.75 -1 2000892..2001632 - 246 115359728 - Bamb_4983 - acetoacetate decarboxylase 1759 69.59 0 2002079..2002660 + 193 115359729 - Bamb_4984 - phosphoesterase, PA-phosphatase related 1760 62.67 -1 2002699..2002923 - 74 115359730 - Bamb_4985 - hypothetical protein 1761 70.19 0 2003043..2003864 - 273 115359731 - Bamb_4986 - FAD-binding 9, siderophore-interacting domain-containing protein 1762 69.61 0 2003902..2004615 - 237 115359732 - Bamb_4987 - PadR-like family transcriptional regulator 1763 69.76 0 2005426..2006427 + 333 115359733 - Bamb_4988 - FHA domain-containing protein 1764 71.19 +1 2006424..2010470 + 1348 115359734 - Bamb_4989 - serine/threonine protein kinase 1765 58.84 -1 2010504..2010848 + 114 115359735 - Bamb_4990 - hypothetical protein 1766 60.61 -1 2010865..2011227 + 120 115359736 - Bamb_4991 - hypothetical protein 1767 68.72 0 2011322..2013559 + 745 115359737 - Bamb_4992 - hypothetical protein 1768 59.38 -1 2013686..2014261 - 191 115359738 - Bamb_4993 - hypothetical protein 1769 63.64 0 2014542..2014673 + 43 115359739 - Bamb_4994 - betaine-aldehyde dehydrogenase 1770 65.19 0 2014860..2015810 - 316 115359740 - Bamb_4995 - AraC family transcriptional regulator 1771 63.16 0 2015912..2016139 - 75 115359741 - Bamb_4996 - hypothetical protein 1772 67.73 0 2016196..2017794 + 532 115359742 - Bamb_4997 - glucose-methanol-choline oxidoreductase 1773 66.06 0 2017836..2019323 + 495 115359743 - Bamb_4998 - aldehyde dehydrogenase 1774 66.76 0 2019393..2020484 - 363 115359744 - Bamb_4999 - outer membrane protein (porin) 1775 71.32 +1 2020696..2021340 - 214 115359745 - Bamb_5000 - dehydrogenases with different specificities-like protein 1776 71.39 +1 2021395..2022516 - 373 115359746 - Bamb_5001 - alcohol dehydrogenase 1777 69.12 0 2022518..2023819 - 433 115359747 - Bamb_5002 - major facilitator transporter 1778 61.05 -1 2023838..2024371 - 177 115359748 - Bamb_5003 - cupin 2 domain-containing protein 1779 69.05 0 2024559..2025524 + 321 115359749 - Bamb_5004 - AraC family transcriptional regulator 1780 66.88 0 2025787..2026734 - 315 115359750 - Bamb_5005 - aldo/keto reductase 1781 67.31 0 2027109..2027729 - 206 115359751 - Bamb_5006 - lysine exporter protein LysE/YggA 1782 68.90 0 2027836..2028729 + 297 115359752 - Bamb_5007 - chromosome replication initiation inhibitor protein 1783 67.33 0 2028799..2029548 - 249 115359753 - Bamb_5008 - Crp/FNR family transcriptional regulator 1784 67.30 0 2029696..2030166 - 156 115359754 - Bamb_5009 - UspA domain-containing protein 1785 68.61 0 2030770..2031180 - 136 115359755 - Bamb_5010 - hypothetical protein 1786 64.53 0 2031459..2031692 + 77 115359756 - Bamb_5011 - hypothetical protein 1787 67.43 0 2031836..2032756 + 306 115359757 - Bamb_5012 - Serine O-acetyltransferase 1788 68.66 0 2032789..2033592 - 267 115359758 - Bamb_5013 - short-chain dehydrogenase/reductase SDR 1789 64.29 0 2033592..2034221 - 209 115359759 folE Bamb_5014 - GTP cyclohydrolase I 1790 69.47 0 2034323..2035249 - 308 115359760 - Bamb_5015 - LysR family transcriptional regulator 1791 67.40 0 2035366..2036598 + 410 115359761 - Bamb_5016 - 4-hydroxybenzoate 3-monooxygenase 1792 66.67 0 2036743..2037459 + 238 115359762 - Bamb_5017 - 3-oxoacid CoA-transferase, A subunit 1793 65.60 0 2037479..2038135 + 218 115359763 - Bamb_5018 - 3-oxoacid CoA-transferase, B subunit 1794 72.23 +1 2038224..2039606 + 460 115359764 - Bamb_5019 - 3-carboxy-cis,cis-muconate cycloisomerase 1795 69.08 0 2039606..2040391 + 261 115359765 - Bamb_5020 - 3-oxoadipate enol-lactonase 1796 65.12 0 2040402..2040788 + 128 115359766 - Bamb_5021 - 4-carboxymuconolactone decarboxylase 1797 66.67 0 2040986..2042344 + 452 115359767 - Bamb_5022 - major facilitator transporter 1798 63.33 0 2042468..2042707 - 79 115359768 - Bamb_5023 - hypothetical protein 1799 65.53 0 2042824..2043441 - 205 115359769 - Bamb_5024 - lysine exporter protein LysE/YggA 1800 60.67 -1 2043586..2044119 - 177 115359770 - Bamb_5025 - endoribonuclease L-PSP 1801 65.29 0 2044116..2045348 - 410 115359771 - Bamb_5026 - acyl-CoA dehydrogenase type 2 1802 59.84 -1 2045348..2046358 - 336 115359772 - Bamb_5027 - hypothetical protein 1803 63.12 0 2046382..2047905 - 507 115359773 - Bamb_5028 - AMP-dependent synthetase and ligase 1804 61.83 -1 2047895..2049115 - 406 115359774 - Bamb_5029 - major facilitator transporter 1805 58.66 -2 2049223..2049609 - 128 115359775 ectC Bamb_5030 - L-ectoine synthase 1806 64.14 0 2050214..2051122 - 302 115359776 - Bamb_5031 - LysR family transcriptional regulator 66.96 MEAN 4.07 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0