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Burkholderia cepacia AMMD chromosome 2, complete sequence - 1..2646969 2346 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1657 66.90 0 1885841..1886272 + 143 115359627 - Bamb_4882 - hypothetical protein 1658 65.22 0 1886306..1886926 - 206 115359628 - Bamb_4883 - hemolysin III family channel protein 1659 66.57 0 1887361..1889439 - 692 115359629 - Bamb_4884 - carbon starvation protein CstA 1660 66.20 0 1889738..1890166 - 142 115359630 - Bamb_4885 - PRC-barrel domain-containing protein 1661 68.35 0 1890599..1891729 - 376 115359631 - Bamb_4886 - phospho-2-dehydro-3-deoxyheptonate aldolase 1662 67.85 0 1891868..1892545 + 225 115359632 - Bamb_4887 - hypothetical protein 1663 60.28 -1 1892574..1892996 + 140 115359633 - Bamb_4888 - hypothetical protein 1664 68.35 0 1893081..1893791 - 236 115359634 - Bamb_4889 - hypothetical protein 1665 71.37 +1 1894209..1894973 + 254 115359635 - Bamb_4890 - short chain dehydrogenase 1666 70.78 0 1894992..1895696 - 234 115359636 - Bamb_4891 - MOSC domain-containing protein 1667 70.35 0 1895693..1896589 - 298 115359637 - Bamb_4892 - dihydrodipicolinate synthase 1668 66.16 0 1896640..1897422 - 260 115359638 - Bamb_4893 - hypothetical protein 1669 64.09 0 1897557..1898099 + 180 115359639 - Bamb_4894 - XRE family transcriptional regulator 1670 67.48 0 1898131..1898868 + 245 115359640 - Bamb_4895 - histidine utilization repressor 1671 67.49 0 1898960..1899808 - 282 115359641 - Bamb_4896 - phytanoyl-CoA dioxygenase 1672 66.04 0 1899857..1900660 - 267 115359642 - Bamb_4897 - extracellular solute-binding protein 1673 68.97 0 1901175..1902041 + 288 115359643 - Bamb_4898 - LysR family transcriptional regulator 1674 66.87 0 1902108..1902596 - 162 115359644 - Bamb_4899 - hypothetical protein 1675 72.32 +1 1902661..1903845 - 394 115359645 - Bamb_4900 - cytosine deaminase 1676 67.09 0 1903856..1904323 + 155 115359646 - Bamb_4901 - hypothetical protein 1677 69.76 0 1904529..1905143 + 204 115359647 - Bamb_4902 - 17 kDa surface antigen 1678 67.06 0 1905436..1905942 + 168 115359648 - Bamb_4903 - GCN5-related N-acetyltransferase 1679 68.92 0 1905995..1907992 - 665 115359649 - Bamb_4904 - glycoside hydrolase family protein 1680 66.21 0 1908256..1908915 - 219 115359650 - Bamb_4905 - hypothetical protein 1681 69.32 0 1909307..1910665 + 452 115359651 - Bamb_4906 - aminotransferase 1682 67.85 0 1910843..1912027 - 394 115359652 - Bamb_4907 - amidohydrolase 1683 73.17 +1 1912066..1913310 - 414 115359653 - Bamb_4908 - diaminopropionate ammonia-lyase 1684 64.78 0 1913493..1913969 + 158 115359654 - Bamb_4909 - AsnC family transcriptional regulator 1685 66.83 0 1913972..1914589 - 205 115359655 - Bamb_4910 - DNA polymerase III, epsilon subunit 1686 69.16 0 1914819..1916540 - 573 115359656 - Bamb_4911 - feruloyl esterase 1687 71.98 +1 1916569..1917717 - 382 115359657 - Bamb_4912 - porin 1688 72.14 +1 1917781..1918986 - 401 115359658 - Bamb_4913 - putative 3-hydroxyphenylpropionic transporter MhpT 1689 70.55 0 1919207..1921114 - 635 115359659 - Bamb_4914 - feruloyl-CoA synthase 1690 71.70 +1 1921111..1922559 - 482 115359660 - Bamb_4915 - aldehyde dehydrogenase 1691 66.06 0 1922607..1923437 - 276 115359661 - Bamb_4916 - p-hydroxycinnamoyl CoA hydratase/lyase 1692 70.63 0 1923662..1924165 - 167 115359662 - Bamb_4917 - MarR family transcriptional regulator 1693 70.67 0 1924338..1925237 - 299 115359663 - Bamb_4918 - SMP-30/gluconolaconase/LRE domain-containing protein 1694 66.08 0 1925283..1926302 - 339 115359664 araH Bamb_4919 - L-arabinose transporter permease protein 1695 70.45 0 1926338..1927897 - 519 115359665 araG Bamb_4920 - L-arabinose transporter ATP-binding protein 1696 68.06 0 1927918..1928922 - 334 115359666 - Bamb_4921 - periplasmic binding protein/LacI transcriptional regulator 1697 71.51 +1 1929004..1929933 - 309 115359667 - Bamb_4922 - galactose 1-dehydrogenase 1698 68.71 0 1929958..1930887 - 309 115359668 - Bamb_4923 - dihydrodipicolinate synthetase 1699 69.83 0 1930940..1932298 - 452 115359669 - Bamb_4924 - major facilitator transporter 1700 68.66 0 1932532..1934283 - 583 115359670 - Bamb_4925 - dihydroxy-acid dehydratase 1701 71.08 +1 1934398..1935348 + 316 115359671 - Bamb_4926 - LysR family transcriptional regulator 1702 65.41 0 1935351..1935827 - 158 115359672 - Bamb_4927 - OsmC family protein 1703 68.61 0 1936235..1938340 + 701 115359673 - Bamb_4928 - TonB-dependent siderophore receptor 1704 71.28 +1 1938456..1939496 - 346 115359674 - Bamb_4929 - LacI family transcription regulator 1705 71.02 0 1939687..1940835 + 382 115359675 - Bamb_4930 - ABC transporter related 1706 70.43 0 1940844..1942835 + 663 115359676 - Bamb_4931 - Beta-galactosidase 1707 65.71 0 1942903..1944162 + 419 115359677 - Bamb_4932 - extracellular solute-binding protein 1708 66.46 0 1944223..1945167 + 314 115359678 - Bamb_4933 - binding-protein-dependent transport systems inner membrane component 1709 62.44 -1 1945185..1946036 + 283 115359679 - Bamb_4934 - binding-protein-dependent transport systems inner membrane component 1710 66.67 0 1946223..1947344 + 373 115359680 - Bamb_4935 - filamentation induced by cAMP protein Fic 1711 69.44 0 1947439..1948917 - 492 115359681 - Bamb_4936 - 2-nitropropane dioxygenase, NPD 1712 64.98 0 1949113..1949883 - 256 115359682 - Bamb_4937 - DNA-binding transcriptional regulator GlcC 1713 69.13 0 1950107..1951606 + 499 115359683 - Bamb_4938 - glycolate oxidase subunit GlcD 1714 73.59 +1 1951606..1952688 + 360 115359684 glcE Bamb_4939 - glycolate oxidase FAD binding subunit 1715 71.42 +1 1952713..1953933 + 406 115359685 glcF Bamb_4940 - glycolate oxidase iron-sulfur subunit 1716 69.63 0 1953956..1954360 + 134 115359686 - Bamb_4941 - hypothetical protein 1717 68.41 0 1954397..1956571 + 724 115359687 - Bamb_4942 - malate synthase G 1718 62.32 -1 1956650..1956994 - 114 115359688 - Bamb_4943 - hypothetical protein 1719 67.75 0 1957058..1958620 + 520 115359689 - Bamb_4944 - diguanylate cyclase 1720 69.42 0 1958754..1960133 + 459 115359690 - Bamb_4945 - periplasmic sensor signal transduction histidine kinase 1721 69.15 0 1960165..1960809 + 214 115359691 - Bamb_4946 - two component LuxR family transcriptional regulator 1722 64.06 0 1960920..1961570 - 216 115359692 - Bamb_4947 - toluene tolerance family protein 1723 69.63 0 1961847..1964480 + 877 115359693 - Bamb_4948 - RND efflux transporter 1724 69.45 0 1964473..1965477 + 334 115359694 - Bamb_4949 - VacJ family lipoprotein 1725 76.27 +2 1965589..1966296 - 235 115359695 - Bamb_4950 - hypothetical protein 1726 68.24 0 1966300..1968273 - 657 115359696 - Bamb_4951 - squalene-hopene cyclase 1727 73.44 +1 1968289..1969542 - 417 115359697 - Bamb_4952 - amine oxidase 1728 69.49 0 1969547..1970395 - 282 115359698 - Bamb_4953 - squalene/phytoene synthase 1729 69.07 0 1970656..1970988 - 110 115359699 - Bamb_4954 - hypothetical protein 1730 69.83 0 1971207..1972091 + 294 115359700 - Bamb_4955 - esterase 1731 68.10 0 1972136..1973110 - 324 115359701 - Bamb_4956 - diguanylate cyclase with PAS/PAC sensor 1732 66.04 0 1973107..1973742 - 211 115359702 - Bamb_4957 - CheC, inhibitor of MCP methylation 1733 59.08 -1 1973726..1974094 - 122 115359703 - Bamb_4958 - response regulator receiver protein 1734 67.96 0 1974561..1976801 + 746 115359704 - Bamb_4959 - periplasmic sensor hybrid histidine kinase 1735 65.95 0 1976847..1977401 - 184 115359705 - Bamb_4960 - NADPH-dependent FMN reductase 1736 64.32 0 1977767..1978363 + 198 115359706 - Bamb_4961 - RNA polymerase sigma factor 1737 70.18 0 1978344..1978571 + 75 115359707 - Bamb_4962 - hypothetical protein 1738 74.80 +1 1978605..1978973 + 122 115359708 - Bamb_4963 - hypothetical protein 1739 63.89 0 1979067..1979426 - 119 115359709 - Bamb_4964 - arsenate reductase 1740 60.94 -1 1980429..1981091 + 220 115359710 - Bamb_4965 - cobyrinic acid a,c-diamide synthase 1741 63.09 0 1981115..1982176 + 353 115359711 - Bamb_4966 - parB-like partition proteins 1742 64.41 0 1982267..1983730 - 487 115359712 - Bamb_4967 - hypothetical protein 1743 64.04 0 1985444..1986625 + 393 115359713 - Bamb_4968 - hypothetical protein 1744 65.09 0 1986766..1987779 - 337 115359714 - Bamb_4969 - phage integrase family protein 1745 65.08 0 1987882..1988259 - 125 115359715 - Bamb_4970 - hypothetical protein 1746 69.93 0 1988387..1988998 - 203 115359716 - Bamb_4971 - XRE family transcriptional regulator 1747 67.33 0 1989160..1990359 + 399 115359717 - Bamb_4972 - 2-amino-3-ketobutyrate coenzyme A ligase 1748 63.75 0 1990373..1991401 + 342 115359718 tdh Bamb_4973 - L-threonine 3-dehydrogenase 1749 66.83 0 1992128..1992742 + 204 115359719 - Bamb_4974 - TetR family transcriptional regulator 1750 64.58 0 1992798..1993277 + 159 115359720 - Bamb_4975 - hypothetical protein 1751 67.31 0 1993776..1994861 - 361 115359721 - Bamb_4976 - tartrate dehydrogenase 1752 69.37 0 1994979..1995902 + 307 115359722 - Bamb_4977 - LysR family transcriptional regulator 1753 68.25 0 1996062..1997009 - 315 115359723 - Bamb_4978 - N-acetyl-gamma-glutamyl-phosphate reductase 1754 71.07 +1 1997129..1998013 + 294 115359724 - Bamb_4979 - LysR family transcriptional regulator 1755 67.74 0 1998182..1998646 - 154 115359725 - Bamb_4980 - hypothetical protein 1756 66.67 0 1998707..1999924 - 405 115359726 - Bamb_4981 - patatin 66.96 MEAN 4.07 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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