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Burkholderia cepacia AMMD chromosome 2, complete sequence - 1..2646969 2346 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1478 68.87 0 1691472..1692152 - 226 115359448 - Bamb_4702 - hypothetical protein 1479 59.12 -1 1692385..1692702 - 105 115359449 - Bamb_4703 - H-NS histone family protein 1480 61.86 -1 1692955..1693641 + 228 115359450 - Bamb_4704 - two component transcriptional regulator 1481 67.68 0 1693964..1694260 + 98 115359451 - Bamb_4705 - hypothetical protein 1482 67.50 0 1694497..1695576 - 359 115359452 - Bamb_4706 - purine nucleoside permease 1483 69.20 0 1695803..1696393 - 196 115359453 - Bamb_4707 - lysine exporter protein LysE/YggA 1484 71.60 +1 1696466..1697539 - 357 115359454 - Bamb_4708 - selenophosphate synthetase 1485 71.21 +1 1697639..1698475 + 278 115359455 - Bamb_4709 - hypothetical protein 1486 70.97 0 1698564..1700072 - 502 115359456 - Bamb_4710 - GntR family transcriptional regulator 1487 66.82 0 1700141..1701481 + 446 115359457 - Bamb_4711 - 4-aminobutyrate aminotransferase 1488 67.82 0 1701572..1703041 + 489 115359458 - Bamb_4712 - succinic semialdehyde dehydrogenase 1489 63.67 0 1703398..1704330 + 310 115359459 - Bamb_4713 - hypothetical protein 1490 66.85 0 1704378..1705985 - 535 115359460 - Bamb_4714 - methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor 1491 68.67 0 1706196..1707740 - 514 115359461 - Bamb_4715 - methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor 1492 70.29 0 1708109..1708633 + 174 115359462 - Bamb_4716 - hypothetical protein 1493 69.21 0 1708737..1709957 - 406 115359463 - Bamb_4717 - beta-ketoadipyl CoA thiolase 1494 67.27 0 1710128..1710955 + 275 115359464 - Bamb_4718 - IclR family transcriptional regulator 1495 73.96 +1 1711223..1711318 - 31 115359465 - Bamb_4719 - succinylglutamate desuccinylase/aspartoacylase 1496 68.47 0 1711487..1712818 - 443 115359466 - Bamb_4720 - major facilitator transporter 1497 68.51 0 1712882..1714072 - 396 115359467 - Bamb_4721 - amidohydrolase 1498 64.43 0 1714447..1715517 - 356 115359468 - Bamb_4722 - NADH:flavin oxidoreductase/NADH oxidase 1499 61.11 -1 1715573..1716148 - 191 115359469 - Bamb_4723 - isochorismatase hydrolase 1500 62.92 0 1716179..1717033 - 284 115359470 - Bamb_4724 - pirin domain-containing protein 1501 59.98 -1 1717254..1718135 + 293 115359471 - Bamb_4725 - LysR family transcriptional regulator 1502 64.50 0 1718841..1720457 + 538 115359472 - Bamb_4726 - tryptophan halogenase 1503 70.90 0 1720457..1721542 + 361 115359473 - Bamb_4727 - prnB; PrnB 1504 64.32 0 1721587..1723287 + 566 115359474 - Bamb_4728 - FAD dependent oxidoreductase 1505 67.57 0 1723312..1724424 + 370 115359475 - Bamb_4729 - Rieske (2Fe-2S) domain-containing protein 1506 57.69 -2 1724476..1725522 - 348 115359476 - Bamb_4730 - alcohol dehydrogenase 1507 61.11 -1 1725544..1726407 - 287 115359477 - Bamb_4731 - alpha/beta hydrolase fold 1508 63.95 0 1726555..1727805 - 416 115359478 - Bamb_4732 - NADH:flavin oxidoreductase/NADH oxidase 1509 59.40 -1 1727812..1728210 - 132 115359479 - Bamb_4733 - hypothetical protein 1510 61.07 -1 1728265..1729122 - 285 115359480 - Bamb_4734 - alpha/beta hydrolase fold 1511 65.53 0 1729151..1729939 - 262 115359481 - Bamb_4735 - short-chain dehydrogenase/reductase SDR 1512 65.19 0 1729997..1731079 - 360 115359482 - Bamb_4736 - NADH:flavin oxidoreductase/NADH oxidase 1513 66.19 0 1731211..1731840 + 209 115359483 - Bamb_4737 - TetR family transcriptional regulator 1514 63.08 0 1731919..1732839 - 306 115359484 - Bamb_4738 - LysR family transcriptional regulator 1515 65.72 0 1732950..1733687 + 245 115359485 - Bamb_4739 - short-chain dehydrogenase/reductase SDR 1516 63.72 0 1733742..1734827 + 361 115359486 - Bamb_4740 - NADH:flavin oxidoreductase/NADH oxidase 1517 63.95 0 1734911..1735168 - 85 115359487 - Bamb_4741 - hypothetical protein 1518 61.29 -1 1735190..1736026 + 278 115359488 - Bamb_4742 - alpha/beta hydrolase fold 1519 67.92 0 1736335..1736973 + 212 115359489 - Bamb_4743 - TetR family transcriptional regulator 1520 70.63 0 1737019..1738002 + 327 115359490 - Bamb_4744 - alcohol dehydrogenase 1521 63.90 0 1738082..1738660 + 192 115359491 - Bamb_4745 - uncharacterized peroxidase-related enzyme 1522 70.98 0 1738780..1739661 - 293 115359492 - Bamb_4746 - short-chain dehydrogenase/reductase SDR 1523 71.50 +1 1739835..1740413 - 192 115359493 - Bamb_4747 - TetR family transcriptional regulator 1524 67.28 0 1740617..1742092 + 491 115359494 - Bamb_4748 - glucose-6-phosphate 1-dehydrogenase 1525 68.78 0 1742215..1743159 - 314 115359495 - Bamb_4749 - LysR family transcriptional regulator 1526 70.41 0 1743270..1744472 + 400 115359496 - Bamb_4750 - major facilitator transporter 1527 66.67 0 1744502..1744825 + 107 115359497 - Bamb_4751 - hypothetical protein 1528 70.77 0 1744842..1745792 + 316 115359498 - Bamb_4752 - luciferase family protein 1529 66.42 0 1745926..1746732 + 268 115359499 dkgB Bamb_4753 - 2,5-diketo-D-gluconate reductase B 1530 70.16 0 1746798..1747913 + 371 115359500 - Bamb_4754 - NADH:flavin oxidoreductase/NADH oxidase 1531 70.45 0 1747945..1748949 + 334 115359501 - Bamb_4755 - aldo/keto reductase 1532 72.07 +1 1749139..1749675 + 178 115359502 - Bamb_4756 - hypothetical protein 1533 65.29 0 1749781..1750506 - 241 115359503 - Bamb_4757 - O-methyltransferase family protein 1534 67.93 0 1750540..1751172 + 210 115359504 - Bamb_4758 - TetR family transcriptional regulator 1535 68.39 0 1751676..1753064 + 462 115359505 - Bamb_4759 - xanthine/uracil/vitamin C permease 1536 68.79 0 1753237..1753896 + 219 115359506 - Bamb_4760 - hypothetical protein 1537 68.41 0 1753901..1754302 - 133 115359507 - Bamb_4761 - hypothetical protein 1538 67.64 0 1754299..1754607 - 102 115359508 - Bamb_4762 - hypothetical protein 1539 72.57 +1 1754716..1755663 + 315 115359509 - Bamb_4763 - AraC family transcriptional regulator 1540 70.03 0 1755717..1756637 + 306 115359510 - Bamb_4764 - LysR family transcriptional regulator 1541 63.09 0 1756864..1757646 + 260 115359511 - Bamb_4765 - cationic amino acid ABC transporter, periplasmic binding protein 1542 68.01 0 1757905..1759020 + 371 115359512 - Bamb_4766 - succinylglutamate desuccinylase/aspartoacylase 1543 66.54 0 1759190..1759996 - 268 115359513 - Bamb_4767 - YaeC family lipoprotein 1544 64.76 0 1760305..1761459 + 384 115359514 - Bamb_4768 - porin 1545 67.43 0 1761668..1761928 + 86 115359515 - Bamb_4769 - hypothetical protein 1546 68.49 0 1762052..1762435 + 127 115359516 - Bamb_4770 - hypothetical protein 1547 65.35 0 1762507..1762734 + 75 115359517 - Bamb_4771 - hypothetical protein 1548 67.58 0 1762968..1765277 + 769 115359518 - Bamb_4772 - TonB-dependent hemoglobin/transferrin/lactoferrin family receptor 1549 69.23 0 1765327..1766418 + 363 115359519 - Bamb_4773 - hemin-degrading family protein 1550 75.58 +2 1766415..1767323 + 302 115359520 - Bamb_4774 - periplasmic binding protein 1551 74.41 +1 1767339..1768436 + 365 115359521 - Bamb_4775 - transport system permease protein 1552 69.59 0 1768456..1769277 + 273 115359522 - Bamb_4776 - hemin importer ATP-binding subunit 1553 63.54 0 1769375..1769758 + 127 115359523 - Bamb_4777 - hypothetical protein 1554 67.65 0 1769790..1770401 - 203 115359524 - Bamb_4778 - hypothetical protein 1555 70.87 0 1770410..1772527 - 705 115359525 - Bamb_4779 - 1A family penicillin-binding protein 1556 70.47 0 1772671..1773537 + 288 115359526 - Bamb_4780 - aminoglycoside/hydroxyurea antibiotic resistance kinase 1557 58.09 -2 1773757..1774269 + 170 115359527 - Bamb_4781 - hypothetical protein 1558 52.12 -2 1775377..1775706 + 109 115359528 - Bamb_4783 - hypothetical protein 1559 49.77 -2 1776714..1777376 + 220 115359529 - Bamb_4784 - hypothetical protein 1560 50.48 -2 1777709..1778437 + 242 115359530 - Bamb_4785 - hypothetical protein 1561 49.90 -2 1778997..1780004 + 335 115359531 - Bamb_4786 - hypothetical protein 1562 64.16 0 1780977..1781813 - 278 115359532 - Bamb_4787 - hypothetical protein 1563 74.20 +1 1782477..1782914 - 145 115359533 - Bamb_4788 - 17 kDa surface antigen 1564 68.03 0 1783283..1783942 - 219 115359534 - Bamb_4789 - isoprenylcysteine carboxyl methyltransferase 1565 64.85 0 1784118..1784282 - 54 115359535 - Bamb_4790 - hypothetical protein 1566 69.05 0 1784515..1784934 - 139 115359536 - Bamb_4791 - histidine triad (HIT) protein 1567 70.23 0 1785199..1786602 + 467 115359537 - Bamb_4792 - beta-lactamase 1568 66.51 0 1786677..1787300 - 207 115359538 - Bamb_4793 - glutathione S-transferase domain-containing protein 1569 66.03 0 1787441..1787911 - 156 115359539 - Bamb_4794 - integral membrane protein-like protein 1570 71.29 +1 1787908..1789161 - 417 115359540 - Bamb_4795 - NAD-dependent epimerase/dehydratase 1571 64.79 0 1789303..1789836 - 177 115359541 - Bamb_4796 - transcriptional regulators-like protein 1572 63.92 0 1790042..1791244 + 400 115359542 - Bamb_4797 - trans-2-enoyl-CoA reductase 1573 70.50 0 1791299..1792003 - 234 115359543 - Bamb_4798 - short chain dehydrogenase 1574 70.92 0 1792300..1792887 + 195 115359544 - Bamb_4799 - TetR family transcriptional regulator 1575 69.60 0 1792919..1793497 - 192 115359545 - Bamb_4800 - hypothetical protein 1576 69.49 0 1793646..1794176 - 176 115359546 - Bamb_4801 - GCN5-related N-acetyltransferase 1577 69.55 0 1794383..1794868 + 161 115359547 - Bamb_4802 - activator of Hsp90 ATPase 1 family protein 66.96 MEAN 4.07 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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