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Burkholderia cepacia AMMD chromosome 2, complete sequence - 1..2646969 2346 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1449 67.94 0 1657574..1657966 - 130 115359419 - Bamb_4673 - hypothetical protein 1450 70.58 0 1658139..1658624 + 161 115359420 - Bamb_4674 - hypothetical protein 1451 69.18 0 1658693..1660246 - 517 115359421 - Bamb_4675 - galactarate dehydratase 1452 66.12 0 1660485..1661399 + 304 115359422 - Bamb_4676 - 5-dehydro-4-deoxyglucarate dehydratase 1453 66.49 0 1661535..1662086 - 183 115359423 - Bamb_4677 - hypothetical protein 1454 63.29 0 1662224..1662460 + 78 115359424 - Bamb_4678 - hypothetical protein 1455 71.93 +1 1662619..1664196 - 525 115359425 - Bamb_4679 - aldehyde dehydrogenase 1456 66.80 0 1664391..1665848 + 485 115359426 - Bamb_4680 - d-galactonate transporter 1457 67.91 0 1665910..1666635 - 241 115359427 - Bamb_4681 - peptidase M50 1458 68.45 0 1666632..1667585 - 317 115359428 - Bamb_4682 - uncharacterized membrane-anchored protein 1459 71.50 +1 1667841..1668689 + 282 115359429 - Bamb_4683 - XRE family transcriptional regulator 1460 71.45 +1 1668708..1669919 - 403 115359430 - Bamb_4684 - acyl-CoA dehydrogenase type 2 1461 67.02 0 1669916..1670773 - 285 115359431 - Bamb_4685 - hypothetical protein 1462 69.25 0 1670830..1671486 - 218 115359432 - Bamb_4686 - binding-protein-dependent transport systems inner membrane component 1463 71.34 +1 1671479..1672654 - 391 115359433 - Bamb_4687 - ABC transporter related 1464 68.43 0 1672673..1674091 - 472 115359434 - Bamb_4688 - flavin-dependent oxidoreductase 1465 66.67 0 1674102..1674962 - 286 115359435 - Bamb_4689 - NLPA lipoprotein 1466 66.16 0 1675381..1676751 + 456 115359436 - Bamb_4690 - citrate carrier protein 1467 70.47 0 1676871..1678787 + 638 115359437 - Bamb_4691 - periplasmic sensor signal transduction histidine kinase 1468 69.02 0 1678777..1680138 + 453 115359438 - Bamb_4692 - two component, sigma54 specific, Fis family transcriptional regulator 1469 68.13 0 1680164..1680505 + 113 115359439 - Bamb_4693 - hypothetical protein 1470 66.55 0 1680767..1681618 + 283 115359440 - Bamb_4694 - alpha/beta hydrolase fold 1471 62.36 -1 1681712..1682152 - 146 115359441 - Bamb_4695 - transmembrane pair domain-containing protein 1472 69.36 0 1682251..1683141 + 296 115359442 - Bamb_4696 - LysR family transcriptional regulator 1473 71.14 +1 1683321..1684862 - 513 115359443 - Bamb_4697 - RND efflux system outer membrane lipoprotein 1474 65.42 0 1684873..1688088 - 1071 115359444 - Bamb_4698 - hydrophobe/amphiphile efflux-1 (HAE1) family protein 1475 69.05 0 1688134..1689351 - 405 115359445 - Bamb_4699 - RND family efflux transporter MFP subunit 1476 67.83 0 1689383..1690243 - 286 115359446 - Bamb_4700 - alpha/beta hydrolase domain-containing protein 1477 65.07 0 1690414..1691418 + 334 115359447 - Bamb_4701 - LysR family transcriptional regulator 1478 68.87 0 1691472..1692152 - 226 115359448 - Bamb_4702 - hypothetical protein 1479 59.12 -1 1692385..1692702 - 105 115359449 - Bamb_4703 - H-NS histone family protein 1480 61.86 -1 1692955..1693641 + 228 115359450 - Bamb_4704 - two component transcriptional regulator 1481 67.68 0 1693964..1694260 + 98 115359451 - Bamb_4705 - hypothetical protein 1482 67.50 0 1694497..1695576 - 359 115359452 - Bamb_4706 - purine nucleoside permease 1483 69.20 0 1695803..1696393 - 196 115359453 - Bamb_4707 - lysine exporter protein LysE/YggA 1484 71.60 +1 1696466..1697539 - 357 115359454 - Bamb_4708 - selenophosphate synthetase 1485 71.21 +1 1697639..1698475 + 278 115359455 - Bamb_4709 - hypothetical protein 1486 70.97 0 1698564..1700072 - 502 115359456 - Bamb_4710 - GntR family transcriptional regulator 1487 66.82 0 1700141..1701481 + 446 115359457 - Bamb_4711 - 4-aminobutyrate aminotransferase 1488 67.82 0 1701572..1703041 + 489 115359458 - Bamb_4712 - succinic semialdehyde dehydrogenase 1489 63.67 0 1703398..1704330 + 310 115359459 - Bamb_4713 - hypothetical protein 1490 66.85 0 1704378..1705985 - 535 115359460 - Bamb_4714 - methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor 1491 68.67 0 1706196..1707740 - 514 115359461 - Bamb_4715 - methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor 1492 70.29 0 1708109..1708633 + 174 115359462 - Bamb_4716 - hypothetical protein 1493 69.21 0 1708737..1709957 - 406 115359463 - Bamb_4717 - beta-ketoadipyl CoA thiolase 1494 67.27 0 1710128..1710955 + 275 115359464 - Bamb_4718 - IclR family transcriptional regulator 1495 73.96 +1 1711223..1711318 - 31 115359465 - Bamb_4719 - succinylglutamate desuccinylase/aspartoacylase 1496 68.47 0 1711487..1712818 - 443 115359466 - Bamb_4720 - major facilitator transporter 1497 68.51 0 1712882..1714072 - 396 115359467 - Bamb_4721 - amidohydrolase 1498 64.43 0 1714447..1715517 - 356 115359468 - Bamb_4722 - NADH:flavin oxidoreductase/NADH oxidase 1499 61.11 -1 1715573..1716148 - 191 115359469 - Bamb_4723 - isochorismatase hydrolase 1500 62.92 0 1716179..1717033 - 284 115359470 - Bamb_4724 - pirin domain-containing protein 1501 59.98 -1 1717254..1718135 + 293 115359471 - Bamb_4725 - LysR family transcriptional regulator 1502 64.50 0 1718841..1720457 + 538 115359472 - Bamb_4726 - tryptophan halogenase 1503 70.90 0 1720457..1721542 + 361 115359473 - Bamb_4727 - prnB; PrnB 1504 64.32 0 1721587..1723287 + 566 115359474 - Bamb_4728 - FAD dependent oxidoreductase 1505 67.57 0 1723312..1724424 + 370 115359475 - Bamb_4729 - Rieske (2Fe-2S) domain-containing protein 1506 57.69 -2 1724476..1725522 - 348 115359476 - Bamb_4730 - alcohol dehydrogenase 1507 61.11 -1 1725544..1726407 - 287 115359477 - Bamb_4731 - alpha/beta hydrolase fold 1508 63.95 0 1726555..1727805 - 416 115359478 - Bamb_4732 - NADH:flavin oxidoreductase/NADH oxidase 1509 59.40 -1 1727812..1728210 - 132 115359479 - Bamb_4733 - hypothetical protein 1510 61.07 -1 1728265..1729122 - 285 115359480 - Bamb_4734 - alpha/beta hydrolase fold 1511 65.53 0 1729151..1729939 - 262 115359481 - Bamb_4735 - short-chain dehydrogenase/reductase SDR 1512 65.19 0 1729997..1731079 - 360 115359482 - Bamb_4736 - NADH:flavin oxidoreductase/NADH oxidase 1513 66.19 0 1731211..1731840 + 209 115359483 - Bamb_4737 - TetR family transcriptional regulator 1514 63.08 0 1731919..1732839 - 306 115359484 - Bamb_4738 - LysR family transcriptional regulator 1515 65.72 0 1732950..1733687 + 245 115359485 - Bamb_4739 - short-chain dehydrogenase/reductase SDR 1516 63.72 0 1733742..1734827 + 361 115359486 - Bamb_4740 - NADH:flavin oxidoreductase/NADH oxidase 1517 63.95 0 1734911..1735168 - 85 115359487 - Bamb_4741 - hypothetical protein 1518 61.29 -1 1735190..1736026 + 278 115359488 - Bamb_4742 - alpha/beta hydrolase fold 1519 67.92 0 1736335..1736973 + 212 115359489 - Bamb_4743 - TetR family transcriptional regulator 1520 70.63 0 1737019..1738002 + 327 115359490 - Bamb_4744 - alcohol dehydrogenase 1521 63.90 0 1738082..1738660 + 192 115359491 - Bamb_4745 - uncharacterized peroxidase-related enzyme 1522 70.98 0 1738780..1739661 - 293 115359492 - Bamb_4746 - short-chain dehydrogenase/reductase SDR 1523 71.50 +1 1739835..1740413 - 192 115359493 - Bamb_4747 - TetR family transcriptional regulator 1524 67.28 0 1740617..1742092 + 491 115359494 - Bamb_4748 - glucose-6-phosphate 1-dehydrogenase 1525 68.78 0 1742215..1743159 - 314 115359495 - Bamb_4749 - LysR family transcriptional regulator 1526 70.41 0 1743270..1744472 + 400 115359496 - Bamb_4750 - major facilitator transporter 1527 66.67 0 1744502..1744825 + 107 115359497 - Bamb_4751 - hypothetical protein 1528 70.77 0 1744842..1745792 + 316 115359498 - Bamb_4752 - luciferase family protein 1529 66.42 0 1745926..1746732 + 268 115359499 dkgB Bamb_4753 - 2,5-diketo-D-gluconate reductase B 1530 70.16 0 1746798..1747913 + 371 115359500 - Bamb_4754 - NADH:flavin oxidoreductase/NADH oxidase 1531 70.45 0 1747945..1748949 + 334 115359501 - Bamb_4755 - aldo/keto reductase 1532 72.07 +1 1749139..1749675 + 178 115359502 - Bamb_4756 - hypothetical protein 1533 65.29 0 1749781..1750506 - 241 115359503 - Bamb_4757 - O-methyltransferase family protein 1534 67.93 0 1750540..1751172 + 210 115359504 - Bamb_4758 - TetR family transcriptional regulator 1535 68.39 0 1751676..1753064 + 462 115359505 - Bamb_4759 - xanthine/uracil/vitamin C permease 1536 68.79 0 1753237..1753896 + 219 115359506 - Bamb_4760 - hypothetical protein 1537 68.41 0 1753901..1754302 - 133 115359507 - Bamb_4761 - hypothetical protein 1538 67.64 0 1754299..1754607 - 102 115359508 - Bamb_4762 - hypothetical protein 1539 72.57 +1 1754716..1755663 + 315 115359509 - Bamb_4763 - AraC family transcriptional regulator 1540 70.03 0 1755717..1756637 + 306 115359510 - Bamb_4764 - LysR family transcriptional regulator 1541 63.09 0 1756864..1757646 + 260 115359511 - Bamb_4765 - cationic amino acid ABC transporter, periplasmic binding protein 1542 68.01 0 1757905..1759020 + 371 115359512 - Bamb_4766 - succinylglutamate desuccinylase/aspartoacylase 1543 66.54 0 1759190..1759996 - 268 115359513 - Bamb_4767 - YaeC family lipoprotein 1544 64.76 0 1760305..1761459 + 384 115359514 - Bamb_4768 - porin 1545 67.43 0 1761668..1761928 + 86 115359515 - Bamb_4769 - hypothetical protein 1546 68.49 0 1762052..1762435 + 127 115359516 - Bamb_4770 - hypothetical protein 1547 65.35 0 1762507..1762734 + 75 115359517 - Bamb_4771 - hypothetical protein 1548 67.58 0 1762968..1765277 + 769 115359518 - Bamb_4772 - TonB-dependent hemoglobin/transferrin/lactoferrin family receptor 66.96 MEAN 4.07 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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