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Burkholderia cepacia AMMD chromosome 2, complete sequence - 1..2646969 2346 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1400 71.13 +1 1592316..1593368 - 350 115359370 - Bamb_4624 - inosine/uridine-preferring nucleoside hydrolase 1401 63.97 0 1593379..1594491 - 370 115359371 - Bamb_4625 - porin 1402 69.06 0 1594655..1596157 - 500 115359372 - Bamb_4626 - hypothetical protein 1403 66.60 0 1596442..1597869 - 475 115359373 - Bamb_4627 - major facilitator transporter 1404 63.08 0 1597940..1598329 - 129 115359374 - Bamb_4628 - hypothetical protein 1405 68.11 0 1598333..1600831 + 832 115359375 - Bamb_4629 - MscS mechanosensitive ion channel 1406 67.79 0 1600929..1602440 - 503 115359376 - Bamb_4630 - aldehyde dehydrogenase 1407 66.67 0 1603075..1604655 + 526 115359377 - Bamb_4631 - amino acid permease-associated region 1408 71.63 +1 1604818..1606086 + 422 115359378 - Bamb_4632 - FAD dependent oxidoreductase 1409 64.00 0 1606205..1606879 + 224 115359379 - Bamb_4633 - TetR family transcriptional regulator 1410 69.30 0 1607008..1608789 - 593 115359380 - Bamb_4634 - phospholipase D/transphosphatidylase 1411 70.16 0 1608901..1609701 - 266 115359381 - Bamb_4635 - DeoR family transcriptional regulator 1412 63.44 0 1609865..1610050 + 61 115359382 - Bamb_4636 - hypothetical protein 1413 72.87 +1 1610413..1611282 + 289 115359383 - Bamb_4637 - hypothetical protein 1414 68.24 0 1611461..1612348 + 295 115359384 nadE Bamb_4638 - NAD synthetase 1415 65.12 0 1612421..1614097 - 558 115359385 - Bamb_4639 - peptidase S10, serine carboxypeptidase 1416 70.44 0 1614171..1615760 - 529 115359386 - Bamb_4640 - peptidase S8 and S53, subtilisin, kexin, sedolisin 1417 68.43 0 1616043..1616666 - 207 115359387 - Bamb_4641 - lysine exporter protein LysE/YggA 1418 68.17 0 1616801..1617265 + 154 115359388 - Bamb_4642 - AsnC family transcriptional regulator 1419 69.08 0 1617391..1618302 - 303 115359389 - Bamb_4643 - LysR family transcriptional regulator 1420 67.68 0 1618406..1619395 + 329 115359390 - Bamb_4644 - putative agmatinase 1421 67.72 0 1619449..1620774 + 441 115359391 - Bamb_4645 - major facilitator transporter 1422 66.06 0 1620886..1623180 - 764 115359392 - Bamb_4646 - 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1423 66.23 0 1623309..1624217 + 302 115359393 - Bamb_4647 - LysR family transcriptional regulator 1424 67.08 0 1624240..1624959 - 239 115359394 - Bamb_4648 - hypothetical protein 1425 65.24 0 1624973..1625182 - 69 115359395 - Bamb_4649 - hypothetical protein 1426 71.77 +1 1625402..1625989 + 195 115359396 - Bamb_4650 - phosphoglycerate mutase 1427 66.16 0 1626129..1627721 + 530 115359397 - Bamb_4651 - phosphate transporter 1428 58.18 -2 1627804..1628121 - 105 115359398 - Bamb_4652 - transposase mutator family protein 1429 65.28 0 1628527..1629318 + 263 115359399 - Bamb_4653 - hypothetical protein 1430 65.68 0 1629886..1631310 - 474 115359400 - Bamb_4654 - EmrB/QacA family drug resistance transporter 1431 65.94 0 1637826..1638377 - 183 115359401 - Bamb_4655 - HD phosphohydrolase-like protein 1432 66.39 0 1638382..1639836 - 484 115359402 - Bamb_4656 - aldehyde dehydrogenase 1433 69.87 0 1639833..1641143 - 436 115359403 - Bamb_4657 - phosphonoacetate hydrolase 1434 72.24 +1 1641140..1642000 - 286 115359404 - Bamb_4658 - binding-protein-dependent transport systems inner membrane component 1435 69.82 0 1641990..1642910 - 306 115359405 - Bamb_4659 - binding-protein-dependent transport systems inner membrane component 1436 70.74 0 1642888..1643991 - 367 115359406 - Bamb_4660 - ABC transporter related 1437 64.55 0 1644026..1645114 - 362 115359407 - Bamb_4661 - ABC transporter periplasmic-binding protein 1438 69.73 0 1645368..1646477 + 369 115359408 - Bamb_4662 - 2-aminoethylphosphonate--pyruvate transaminase 1439 66.08 0 1646580..1647947 - 455 115359409 - Bamb_4663 - major facilitator transporter 1440 69.36 0 1647982..1648836 - 284 115359410 - Bamb_4664 - shikimate 5-dehydrogenase 1441 65.79 0 1648833..1649288 - 151 115359411 - Bamb_4665 - 3-dehydroquinate dehydratase 1442 68.89 0 1649545..1651437 + 630 115359412 - Bamb_4666 - 4-hydroxyphenylpyruvate dioxygenase 1443 66.29 0 1651724..1651987 + 87 115359413 - Bamb_4667 - hypothetical protein 1444 66.29 0 1652063..1652857 - 264 115359414 - Bamb_4668 - AraC family transcriptional regulator 1445 66.05 0 1653478..1654614 + 378 115359415 - Bamb_4669 - extracellular ligand-binding receptor 1446 67.66 0 1654935..1656245 + 436 115359416 - Bamb_4670 - major facilitator transporter 1447 64.38 0 1656377..1656814 - 145 115359417 - Bamb_4671 - DoxX family protein 1448 69.08 0 1657039..1657494 - 151 115359418 - Bamb_4672 - RbsD or FucU transport 1449 67.94 0 1657574..1657966 - 130 115359419 - Bamb_4673 - hypothetical protein 1450 70.58 0 1658139..1658624 + 161 115359420 - Bamb_4674 - hypothetical protein 1451 69.18 0 1658693..1660246 - 517 115359421 - Bamb_4675 - galactarate dehydratase 1452 66.12 0 1660485..1661399 + 304 115359422 - Bamb_4676 - 5-dehydro-4-deoxyglucarate dehydratase 1453 66.49 0 1661535..1662086 - 183 115359423 - Bamb_4677 - hypothetical protein 1454 63.29 0 1662224..1662460 + 78 115359424 - Bamb_4678 - hypothetical protein 1455 71.93 +1 1662619..1664196 - 525 115359425 - Bamb_4679 - aldehyde dehydrogenase 1456 66.80 0 1664391..1665848 + 485 115359426 - Bamb_4680 - d-galactonate transporter 1457 67.91 0 1665910..1666635 - 241 115359427 - Bamb_4681 - peptidase M50 1458 68.45 0 1666632..1667585 - 317 115359428 - Bamb_4682 - uncharacterized membrane-anchored protein 1459 71.50 +1 1667841..1668689 + 282 115359429 - Bamb_4683 - XRE family transcriptional regulator 1460 71.45 +1 1668708..1669919 - 403 115359430 - Bamb_4684 - acyl-CoA dehydrogenase type 2 1461 67.02 0 1669916..1670773 - 285 115359431 - Bamb_4685 - hypothetical protein 1462 69.25 0 1670830..1671486 - 218 115359432 - Bamb_4686 - binding-protein-dependent transport systems inner membrane component 1463 71.34 +1 1671479..1672654 - 391 115359433 - Bamb_4687 - ABC transporter related 1464 68.43 0 1672673..1674091 - 472 115359434 - Bamb_4688 - flavin-dependent oxidoreductase 1465 66.67 0 1674102..1674962 - 286 115359435 - Bamb_4689 - NLPA lipoprotein 1466 66.16 0 1675381..1676751 + 456 115359436 - Bamb_4690 - citrate carrier protein 1467 70.47 0 1676871..1678787 + 638 115359437 - Bamb_4691 - periplasmic sensor signal transduction histidine kinase 1468 69.02 0 1678777..1680138 + 453 115359438 - Bamb_4692 - two component, sigma54 specific, Fis family transcriptional regulator 1469 68.13 0 1680164..1680505 + 113 115359439 - Bamb_4693 - hypothetical protein 1470 66.55 0 1680767..1681618 + 283 115359440 - Bamb_4694 - alpha/beta hydrolase fold 1471 62.36 -1 1681712..1682152 - 146 115359441 - Bamb_4695 - transmembrane pair domain-containing protein 1472 69.36 0 1682251..1683141 + 296 115359442 - Bamb_4696 - LysR family transcriptional regulator 1473 71.14 +1 1683321..1684862 - 513 115359443 - Bamb_4697 - RND efflux system outer membrane lipoprotein 1474 65.42 0 1684873..1688088 - 1071 115359444 - Bamb_4698 - hydrophobe/amphiphile efflux-1 (HAE1) family protein 1475 69.05 0 1688134..1689351 - 405 115359445 - Bamb_4699 - RND family efflux transporter MFP subunit 1476 67.83 0 1689383..1690243 - 286 115359446 - Bamb_4700 - alpha/beta hydrolase domain-containing protein 1477 65.07 0 1690414..1691418 + 334 115359447 - Bamb_4701 - LysR family transcriptional regulator 1478 68.87 0 1691472..1692152 - 226 115359448 - Bamb_4702 - hypothetical protein 1479 59.12 -1 1692385..1692702 - 105 115359449 - Bamb_4703 - H-NS histone family protein 1480 61.86 -1 1692955..1693641 + 228 115359450 - Bamb_4704 - two component transcriptional regulator 1481 67.68 0 1693964..1694260 + 98 115359451 - Bamb_4705 - hypothetical protein 1482 67.50 0 1694497..1695576 - 359 115359452 - Bamb_4706 - purine nucleoside permease 1483 69.20 0 1695803..1696393 - 196 115359453 - Bamb_4707 - lysine exporter protein LysE/YggA 1484 71.60 +1 1696466..1697539 - 357 115359454 - Bamb_4708 - selenophosphate synthetase 1485 71.21 +1 1697639..1698475 + 278 115359455 - Bamb_4709 - hypothetical protein 1486 70.97 0 1698564..1700072 - 502 115359456 - Bamb_4710 - GntR family transcriptional regulator 1487 66.82 0 1700141..1701481 + 446 115359457 - Bamb_4711 - 4-aminobutyrate aminotransferase 1488 67.82 0 1701572..1703041 + 489 115359458 - Bamb_4712 - succinic semialdehyde dehydrogenase 1489 63.67 0 1703398..1704330 + 310 115359459 - Bamb_4713 - hypothetical protein 1490 66.85 0 1704378..1705985 - 535 115359460 - Bamb_4714 - methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor 1491 68.67 0 1706196..1707740 - 514 115359461 - Bamb_4715 - methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor 1492 70.29 0 1708109..1708633 + 174 115359462 - Bamb_4716 - hypothetical protein 1493 69.21 0 1708737..1709957 - 406 115359463 - Bamb_4717 - beta-ketoadipyl CoA thiolase 1494 67.27 0 1710128..1710955 + 275 115359464 - Bamb_4718 - IclR family transcriptional regulator 1495 73.96 +1 1711223..1711318 - 31 115359465 - Bamb_4719 - succinylglutamate desuccinylase/aspartoacylase 1496 68.47 0 1711487..1712818 - 443 115359466 - Bamb_4720 - major facilitator transporter 1497 68.51 0 1712882..1714072 - 396 115359467 - Bamb_4721 - amidohydrolase 1498 64.43 0 1714447..1715517 - 356 115359468 - Bamb_4722 - NADH:flavin oxidoreductase/NADH oxidase 1499 61.11 -1 1715573..1716148 - 191 115359469 - Bamb_4723 - isochorismatase hydrolase 66.96 MEAN 4.07 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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