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Burkholderia cepacia AMMD chromosome 2, complete sequence - 1..2646969 2346 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1320 67.23 0 1495884..1498895 - 1003 115359290 - Bamb_4544 - sarcosine oxidase alpha subunit family protein 1321 64.74 0 1498892..1499203 - 103 115359291 - Bamb_4545 - sarcosine oxidase, delta subunit, heterotetrameric 1322 65.62 0 1499229..1500473 - 414 115359292 - Bamb_4546 - sarcosine oxidase beta subunit family protein 1323 66.67 0 1500489..1501874 - 461 115359293 - Bamb_4547 - L-serine dehydratase 1 1324 68.99 0 1502137..1503210 + 357 115359294 - Bamb_4548 - AraC family transcriptional regulator 1325 69.08 0 1503416..1504120 + 234 115359295 - Bamb_4549 - GntR domain-containing protein 1326 70.37 0 1504191..1505081 + 296 115359296 - Bamb_4550 - 3-hydroxyisobutyrate dehydrogenase 1327 70.52 0 1505101..1506399 + 432 115359297 - Bamb_4551 - type III effector Hrp-dependent outers 1328 70.25 0 1506396..1507037 + 213 115359298 - Bamb_4552 - putative aldolase 1329 65.01 0 1507177..1508502 + 441 115359299 - Bamb_4553 - major facilitator transporter 1330 67.82 0 1508567..1509343 + 258 115359300 - Bamb_4554 - hydroxypyruvate isomerase 1331 69.03 0 1509372..1510343 + 323 115359301 - Bamb_4555 - NAD-dependent epimerase/dehydratase 1332 70.59 0 1510340..1510594 + 84 115359302 - Bamb_4556 - hypothetical protein 1333 64.52 0 1510569..1510847 - 92 115359303 - Bamb_4557 - hypothetical protein 1334 68.99 0 1510919..1511263 - 114 115359304 - Bamb_4558 - hypothetical protein 1335 67.25 0 1511468..1512157 + 229 115359305 - Bamb_4559 - aspartyl/asparaginyl beta-hydroxylase 1336 67.52 0 1512186..1513127 - 313 115359306 - Bamb_4560 - LysR family transcriptional regulator 1337 60.90 -1 1513204..1513602 + 132 115359307 - Bamb_4561 - hypothetical protein 1338 66.67 0 1513744..1514013 + 89 115359308 - Bamb_4562 - thiamineS protein 1339 69.89 0 1514067..1515215 + 382 115359309 - Bamb_4563 - glycosyl hydrolase 1340 63.50 0 1515317..1516264 - 315 115359310 - Bamb_4564 - substrate-binding region of ABC-type glycine betaine transport system 1341 66.57 0 1516375..1517373 - 332 115359311 - Bamb_4565 - AraC family transcriptional regulator 1342 64.77 0 1517492..1518388 - 298 115359312 - Bamb_4566 - binding-protein-dependent transport systems inner membrane component 1343 65.98 0 1518381..1519550 - 389 115359313 - Bamb_4567 - glycine betaine/L-proline ABC transporter, ATPase subunit 1344 70.94 0 1520164..1523583 + 1139 115359314 - Bamb_4568 - membrane protein-like protein 1345 73.17 +1 1523580..1524917 + 445 115359315 - Bamb_4569 - hypothetical protein 1346 71.74 +1 1525075..1525863 - 262 115359316 - Bamb_4570 - GCN5-related N-acetyltransferase 1347 61.11 -1 1526122..1526427 + 101 115359317 - Bamb_4571 - NIPSNAP family protein 1348 67.60 0 1526521..1527378 + 285 115359318 - Bamb_4572 - NADPH-dependent FMN reductase 1349 67.12 0 1527601..1527819 + 72 115359319 - Bamb_4573 - hypothetical protein 1350 66.78 0 1527911..1528813 + 300 115359320 - Bamb_4574 - hypothetical protein 1351 65.13 0 1529890..1537371 + 2493 115359321 - Bamb_4575 - hemagluttinin domain-containing protein 1352 70.52 0 1537495..1538169 + 224 115359322 - Bamb_4576 - OmpA/MotB domain-containing protein 1353 64.73 0 1538488..1539675 + 395 115359323 - Bamb_4577 - hypothetical protein 1354 62.68 -1 1539690..1540844 + 384 115359324 - Bamb_4578 - hypothetical protein 1355 67.74 0 1540877..1541344 + 155 115359325 - Bamb_4579 - hypothetical protein 1356 70.69 0 1541549..1541995 - 148 115359326 - Bamb_4580 - hypothetical protein 1357 68.53 0 1542058..1542861 - 267 115359327 - Bamb_4581 - diguanylate phosphodiesterase 1358 64.48 0 1543594..1544736 - 380 115359328 - Bamb_4582 - hypothetical protein 1359 52.45 -2 1544887..1545315 - 142 115359329 - Bamb_4583 - hypothetical protein 1360 55.14 -2 1545646..1545888 + 80 115359330 - Bamb_4584 - hypothetical protein 1361 70.16 0 1546084..1548084 - 666 115359331 - Bamb_4585 - carbamoyl-phosphate synthase L chain, ATP-binding 1362 71.63 +1 1548121..1548906 - 261 115359332 - Bamb_4586 - enoyl-CoA hydratase 1363 67.54 0 1548926..1550533 - 535 115359333 - Bamb_4587 - propionyl-CoA carboxylase 1364 65.40 0 1550565..1551746 - 393 115359334 - Bamb_4588 - acyl-CoA dehydrogenase domain-containing protein 1365 69.08 0 1551918..1552664 + 248 115359335 - Bamb_4589 - TetR family transcriptional regulator 1366 65.95 0 1552737..1553294 - 185 115359336 - Bamb_4590 - MarR family transcriptional regulator 1367 67.29 0 1553381..1554502 + 373 115359337 - Bamb_4591 - vanillate monooxygenase 1368 68.32 0 1554499..1555464 + 321 115359338 - Bamb_4592 - ferredoxin 1369 65.91 0 1555513..1556574 + 353 115359339 - Bamb_4593 - Rieske (2Fe-2S) domain-containing protein 1370 69.64 0 1556705..1558048 + 447 115359340 - Bamb_4594 - major facilitator transporter 1371 68.04 0 1558153..1559247 + 364 115359341 - Bamb_4595 - outer membrane protein (porin) 1372 66.89 0 1559309..1559755 - 148 115359342 - Bamb_4596 - hypothetical protein 1373 68.55 0 1560143..1562320 + 725 115359343 - Bamb_4597 - TonB-dependent siderophore receptor 1374 68.51 0 1562399..1563430 - 343 115359344 - Bamb_4598 - putative dehydrogenase 1375 69.07 0 1563460..1564668 - 402 115359345 - Bamb_4599 - mandelate racemase/muconate lactonizing protein 1376 68.02 0 1564697..1565434 - 245 115359346 - Bamb_4600 - GntR family transcriptional regulator 1377 71.93 +1 1565591..1567054 + 487 115359347 - Bamb_4601 - mannitol dehydrogenase domain-containing protein 1378 69.06 0 1567191..1568483 + 430 115359348 - Bamb_4602 - major facilitator transporter 1379 68.69 0 1568700..1569491 + 263 115359349 - Bamb_4603 - hypothetical protein 1380 67.61 0 1569500..1570564 + 354 115359350 - Bamb_4604 - ABC transporter, periplasmic ligand binding protein 1381 73.94 +1 1570611..1571297 + 228 115359351 - Bamb_4605 - cytochrome c, class I 1382 70.54 0 1571294..1572223 + 309 115359352 - Bamb_4606 - cytochrome c, class I 1383 65.78 0 1572249..1574171 - 640 115359353 - Bamb_4607 - hypothetical protein 1384 67.84 0 1574700..1575893 - 397 115359354 - Bamb_4608 - porin 1385 65.92 0 1575929..1576195 - 88 115359355 - Bamb_4609 - hypothetical protein 1386 69.35 0 1576210..1576842 + 210 115359356 - Bamb_4610 - lysine exporter protein LysE/YggA 1387 68.72 0 1576885..1577421 + 178 115359357 - Bamb_4611 - GCN5-related N-acetyltransferase 1388 69.12 0 1577537..1578271 + 244 115359358 - Bamb_4612 - metallophosphoesterase 1389 71.58 +1 1578518..1579840 - 440 115359359 - Bamb_4613 - periplasmic sensor signal transduction histidine kinase 1390 68.96 0 1579837..1580577 - 246 115359360 - Bamb_4614 - two component transcriptional regulator 1391 66.33 0 1580806..1581399 + 197 115359361 - Bamb_4615 - redoxin domain-containing protein 1392 68.86 0 1581446..1582084 - 212 115359362 - Bamb_4616 - negative transcriptional regulator 1393 72.79 +1 1582213..1583763 + 516 115359363 - Bamb_4617 - GntR family transcriptional regulator 1394 69.59 0 1583872..1586058 + 728 115359364 - Bamb_4618 - glycosyl transferase family protein 1395 69.44 0 1586080..1587990 - 636 115359365 - Bamb_4619 - hypothetical protein 1396 69.50 0 1588071..1588493 - 140 115359366 - Bamb_4620 - hypothetical protein 1397 66.94 0 1588772..1589872 - 366 115359367 - Bamb_4621 - adenosine deaminase 1398 68.89 0 1589919..1591268 - 449 115359368 - Bamb_4622 - xanthine/uracil/vitamin C permease 1399 70.39 0 1591362..1592273 + 303 115359369 - Bamb_4623 - LysR family transcriptional regulator 1400 71.13 +1 1592316..1593368 - 350 115359370 - Bamb_4624 - inosine/uridine-preferring nucleoside hydrolase 1401 63.97 0 1593379..1594491 - 370 115359371 - Bamb_4625 - porin 1402 69.06 0 1594655..1596157 - 500 115359372 - Bamb_4626 - hypothetical protein 1403 66.60 0 1596442..1597869 - 475 115359373 - Bamb_4627 - major facilitator transporter 1404 63.08 0 1597940..1598329 - 129 115359374 - Bamb_4628 - hypothetical protein 1405 68.11 0 1598333..1600831 + 832 115359375 - Bamb_4629 - MscS mechanosensitive ion channel 1406 67.79 0 1600929..1602440 - 503 115359376 - Bamb_4630 - aldehyde dehydrogenase 1407 66.67 0 1603075..1604655 + 526 115359377 - Bamb_4631 - amino acid permease-associated region 1408 71.63 +1 1604818..1606086 + 422 115359378 - Bamb_4632 - FAD dependent oxidoreductase 1409 64.00 0 1606205..1606879 + 224 115359379 - Bamb_4633 - TetR family transcriptional regulator 1410 69.30 0 1607008..1608789 - 593 115359380 - Bamb_4634 - phospholipase D/transphosphatidylase 1411 70.16 0 1608901..1609701 - 266 115359381 - Bamb_4635 - DeoR family transcriptional regulator 1412 63.44 0 1609865..1610050 + 61 115359382 - Bamb_4636 - hypothetical protein 1413 72.87 +1 1610413..1611282 + 289 115359383 - Bamb_4637 - hypothetical protein 1414 68.24 0 1611461..1612348 + 295 115359384 nadE Bamb_4638 - NAD synthetase 1415 65.12 0 1612421..1614097 - 558 115359385 - Bamb_4639 - peptidase S10, serine carboxypeptidase 1416 70.44 0 1614171..1615760 - 529 115359386 - Bamb_4640 - peptidase S8 and S53, subtilisin, kexin, sedolisin 1417 68.43 0 1616043..1616666 - 207 115359387 - Bamb_4641 - lysine exporter protein LysE/YggA 1418 68.17 0 1616801..1617265 + 154 115359388 - Bamb_4642 - AsnC family transcriptional regulator 1419 69.08 0 1617391..1618302 - 303 115359389 - Bamb_4643 - LysR family transcriptional regulator 66.96 MEAN 4.07 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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