version 1.0
Burkholderia cepacia AMMD chromosome 2, complete sequence - 1..2646969 2346 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1256 65.58 0 1421686..1423890 - 734 115359226 - Bamb_4480 - TonB-dependent siderophore receptor 1257 70.26 0 1424412..1425662 - 416 115359227 - Bamb_4481 - major facilitator transporter 1258 63.86 0 1425899..1427038 - 379 115359228 - Bamb_4482 - porin 1259 68.32 0 1427295..1428263 - 322 115359229 - Bamb_4483 - substrate-binding region of ABC-type glycine betaine transport system 1260 69.99 0 1428308..1429843 - 511 115359230 - Bamb_4484 - sulfatase 1261 72.17 +1 1430045..1430971 + 308 115359231 - Bamb_4485 - LysR family transcriptional regulator 1262 65.54 0 1431169..1432053 + 294 115359232 - Bamb_4486 - formyltetrahydrofolate deformylase 1263 64.07 0 1432214..1433869 - 551 115359233 - Bamb_4487 - amino acid permease-associated region 1264 63.77 0 1434048..1434911 - 287 115359234 - Bamb_4488 - substrate-binding region of ABC-type glycine betaine transport system 1265 65.71 0 1435045..1436193 - 382 115359235 - Bamb_4489 - oxidoreductase FAD-binding subunit 1266 63.12 0 1436306..1437547 - 413 115359236 - Bamb_4490 - Rieske (2Fe-2S) domain-containing protein 1267 70.74 0 1437601..1438386 - 261 115359237 - Bamb_4491 - electron transfer flavoprotein beta-subunit 1268 71.20 +1 1438383..1439552 - 389 115359238 - Bamb_4492 - electron transfer flavoprotein, alpha subunit 1269 69.99 0 1439557..1441482 - 641 115359239 - Bamb_4493 - hypothetical protein 1270 66.28 0 1441485..1443548 - 687 115359240 - Bamb_4494 - NADH:flavin oxidoreductase/NADH oxidase 1271 64.79 0 1443623..1444156 - 177 115359241 - Bamb_4495 - 4-vinyl reductase, 4VR 1272 61.21 -1 1444290..1445261 - 323 115359242 - Bamb_4496 - membrane dipeptidase 1273 67.84 0 1445304..1446578 - 424 115359243 - Bamb_4497 - serine hydroxymethyltransferase 1274 66.86 0 1447026..1448048 + 340 115359244 - Bamb_4498 - AraC family transcriptional regulator 1275 65.11 0 1448104..1449516 - 470 115359245 - Bamb_4499 - coagulation factor 5/8 type domain-containing protein 1276 68.22 0 1449802..1451220 + 472 115359246 - Bamb_4500 - GntR family transcriptional regulator 1277 72.86 +1 1451228..1452067 + 279 115359247 - Bamb_4501 - hypothetical protein 1278 66.17 0 1452146..1453342 - 398 115359248 - Bamb_4502 - alcohol dehydrogenase 1279 71.62 +1 1453617..1454807 - 396 115359249 - Bamb_4503 - secretion protein HlyD family protein 1280 72.17 +1 1454807..1456624 - 605 115359250 - Bamb_4504 - RND efflux system outer membrane lipoprotein 1281 70.29 0 1456633..1457571 - 312 115359251 - Bamb_4505 - rhamnosyltransferase 1282 67.92 0 1457582..1459174 - 530 115359252 - Bamb_4506 - EmrB/QacA family drug resistance transporter 1283 72.51 +1 1459171..1460454 - 427 115359253 - Bamb_4507 - glycosyl transferase family protein 1284 68.25 0 1460474..1461043 - 189 115359254 - Bamb_4508 - isoprenylcysteine carboxyl methyltransferase 1285 68.44 0 1461095..1461997 - 300 115359255 - Bamb_4509 - alpha/beta hydrolase fold 1286 68.72 0 1462721..1463305 + 194 115359256 - Bamb_4510 - transcriptional regulator BetI 1287 67.62 0 1463337..1464806 + 489 115359257 - Bamb_4511 - betaine aldehyde dehydrogenase 1288 67.61 0 1464829..1466529 + 566 115359258 - Bamb_4512 - choline dehydrogenase 1289 71.56 +1 1466611..1467735 - 374 115359259 - Bamb_4513 - hypothetical protein 1290 64.68 0 1467966..1468469 - 167 115359260 - Bamb_4514 - hypothetical protein 1291 65.21 0 1468593..1469417 - 274 115359261 - Bamb_4515 - OmpW family protein 1292 68.26 0 1469492..1470745 - 417 115359262 - Bamb_4516 - hypothetical protein 1293 65.73 0 1470817..1472415 - 532 115359263 - Bamb_4517 - hypothetical protein 1294 70.18 0 1472415..1472699 - 94 115359264 - Bamb_4518 - hypothetical protein 1295 53.25 -2 1472930..1473175 - 81 115359265 - Bamb_4519 - hypothetical protein 1296 66.35 0 1473278..1474222 + 314 115359266 - Bamb_4520 - ABC transporter related 1297 63.29 0 1474228..1474998 + 256 115359267 - Bamb_4521 - ABC-2 type transporter 1298 67.94 0 1475167..1475871 + 234 115359268 - Bamb_4522 - beta-lactamase domain-containing protein 1299 66.23 0 1475920..1476150 - 76 115359269 - Bamb_4523 - hypothetical protein 1300 68.98 0 1476304..1478073 + 589 115359270 - Bamb_4524 - PAS/PAC sensor hybrid histidine kinase 1301 63.19 0 1478332..1478763 + 143 115359271 - Bamb_4525 - DGPFAETKE family protein 1302 68.29 0 1478973..1479833 + 286 115359272 - Bamb_4526 - putative esterase 1303 68.90 0 1479949..1480887 + 312 115359273 - Bamb_4527 - LysR family transcriptional regulator 1304 67.26 0 1480999..1482006 + 335 115359274 - Bamb_4528 - aldo/keto reductase 1305 64.07 0 1482126..1482356 - 76 115359275 - Bamb_4529 - hypothetical protein 1306 70.65 0 1482634..1483536 - 300 115359276 - Bamb_4530 - hypothetical protein 1307 64.66 0 1483606..1483953 + 115 115359277 - Bamb_4531 - hypothetical protein 1308 70.65 0 1484562..1486517 + 651 115359278 - Bamb_4532 - x-prolyl-dipeptidyl aminopeptidase 1309 63.39 0 1486565..1486900 + 111 115359279 - Bamb_4533 - hypothetical protein 1310 68.92 0 1486917..1487849 - 310 115359280 - Bamb_4534 - D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 1311 65.69 0 1488016..1488936 + 306 115359281 - Bamb_4535 - substrate-binding region of ABC-type glycine betaine transport system 1312 72.01 +1 1488933..1490111 + 392 115359282 - Bamb_4536 - binding-protein-dependent transport systems inner membrane component 1313 70.50 0 1490108..1491046 + 312 115359283 - Bamb_4537 - ABC transporter related 1314 72.40 +1 1491043..1491810 + 255 115359284 - Bamb_4538 - binding-protein-dependent transport systems inner membrane component 1315 66.37 0 1492030..1492704 + 224 115359285 - Bamb_4539 - lytic transglycosylase, catalytic 1316 63.56 0 1492900..1494252 - 450 115359286 - Bamb_4540 - HipA domain-containing protein 1317 67.28 0 1494252..1494578 - 108 115359287 - Bamb_4541 - XRE family transcriptional regulator 1318 69.35 0 1494822..1495268 - 148 115359288 - Bamb_4542 - dihydroneopterin aldolase 1319 68.57 0 1495265..1495894 - 209 115359289 - Bamb_4543 - sarcosine oxidase, gamma subunit 1320 67.23 0 1495884..1498895 - 1003 115359290 - Bamb_4544 - sarcosine oxidase alpha subunit family protein 1321 64.74 0 1498892..1499203 - 103 115359291 - Bamb_4545 - sarcosine oxidase, delta subunit, heterotetrameric 1322 65.62 0 1499229..1500473 - 414 115359292 - Bamb_4546 - sarcosine oxidase beta subunit family protein 1323 66.67 0 1500489..1501874 - 461 115359293 - Bamb_4547 - L-serine dehydratase 1 1324 68.99 0 1502137..1503210 + 357 115359294 - Bamb_4548 - AraC family transcriptional regulator 1325 69.08 0 1503416..1504120 + 234 115359295 - Bamb_4549 - GntR domain-containing protein 1326 70.37 0 1504191..1505081 + 296 115359296 - Bamb_4550 - 3-hydroxyisobutyrate dehydrogenase 1327 70.52 0 1505101..1506399 + 432 115359297 - Bamb_4551 - type III effector Hrp-dependent outers 1328 70.25 0 1506396..1507037 + 213 115359298 - Bamb_4552 - putative aldolase 1329 65.01 0 1507177..1508502 + 441 115359299 - Bamb_4553 - major facilitator transporter 1330 67.82 0 1508567..1509343 + 258 115359300 - Bamb_4554 - hydroxypyruvate isomerase 1331 69.03 0 1509372..1510343 + 323 115359301 - Bamb_4555 - NAD-dependent epimerase/dehydratase 1332 70.59 0 1510340..1510594 + 84 115359302 - Bamb_4556 - hypothetical protein 1333 64.52 0 1510569..1510847 - 92 115359303 - Bamb_4557 - hypothetical protein 1334 68.99 0 1510919..1511263 - 114 115359304 - Bamb_4558 - hypothetical protein 1335 67.25 0 1511468..1512157 + 229 115359305 - Bamb_4559 - aspartyl/asparaginyl beta-hydroxylase 1336 67.52 0 1512186..1513127 - 313 115359306 - Bamb_4560 - LysR family transcriptional regulator 1337 60.90 -1 1513204..1513602 + 132 115359307 - Bamb_4561 - hypothetical protein 1338 66.67 0 1513744..1514013 + 89 115359308 - Bamb_4562 - thiamineS protein 1339 69.89 0 1514067..1515215 + 382 115359309 - Bamb_4563 - glycosyl hydrolase 1340 63.50 0 1515317..1516264 - 315 115359310 - Bamb_4564 - substrate-binding region of ABC-type glycine betaine transport system 1341 66.57 0 1516375..1517373 - 332 115359311 - Bamb_4565 - AraC family transcriptional regulator 1342 64.77 0 1517492..1518388 - 298 115359312 - Bamb_4566 - binding-protein-dependent transport systems inner membrane component 1343 65.98 0 1518381..1519550 - 389 115359313 - Bamb_4567 - glycine betaine/L-proline ABC transporter, ATPase subunit 1344 70.94 0 1520164..1523583 + 1139 115359314 - Bamb_4568 - membrane protein-like protein 1345 73.17 +1 1523580..1524917 + 445 115359315 - Bamb_4569 - hypothetical protein 1346 71.74 +1 1525075..1525863 - 262 115359316 - Bamb_4570 - GCN5-related N-acetyltransferase 1347 61.11 -1 1526122..1526427 + 101 115359317 - Bamb_4571 - NIPSNAP family protein 1348 67.60 0 1526521..1527378 + 285 115359318 - Bamb_4572 - NADPH-dependent FMN reductase 1349 67.12 0 1527601..1527819 + 72 115359319 - Bamb_4573 - hypothetical protein 1350 66.78 0 1527911..1528813 + 300 115359320 - Bamb_4574 - hypothetical protein 1351 65.13 0 1529890..1537371 + 2493 115359321 - Bamb_4575 - hemagluttinin domain-containing protein 1352 70.52 0 1537495..1538169 + 224 115359322 - Bamb_4576 - OmpA/MotB domain-containing protein 1353 64.73 0 1538488..1539675 + 395 115359323 - Bamb_4577 - hypothetical protein 1354 62.68 -1 1539690..1540844 + 384 115359324 - Bamb_4578 - hypothetical protein 1355 67.74 0 1540877..1541344 + 155 115359325 - Bamb_4579 - hypothetical protein 66.96 MEAN 4.07 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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