version 1.0
Burkholderia cepacia AMMD chromosome 2, complete sequence - 1..2646969 2346 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 82 67.59 0 90937..92676 - 579 115358052 - Bamb_3301 - peptidase S8 and S53, subtilisin, kexin, sedolisin 83 65.12 0 93377..93700 + 107 115358053 - Bamb_3302 - ArsR family transcriptional regulator 84 65.05 0 93697..94128 + 143 115358054 - Bamb_3303 - activator of Hsp90 ATPase 1 family protein 85 68.71 0 94125..94565 + 146 115358055 - Bamb_3304 - hypothetical protein 86 64.42 0 94709..97426 - 905 115358056 acnA Bamb_3305 - aconitate hydratase 87 67.01 0 97479..98930 - 483 115358057 prpD Bamb_3306 - 2-methylcitrate dehydratase 88 65.88 0 98962..99471 - 169 115358058 - Bamb_3307 - hypothetical protein 89 72.14 +1 99695..100699 - 334 115358059 - Bamb_3308 - HpcH/HpaI aldolase 90 65.65 0 100886..101872 - 328 115358060 - Bamb_3309 - malate dehydrogenase 91 66.79 0 102161..102985 + 274 115358061 - Bamb_3310 - GntR family transcriptional regulator 92 58.27 -2 103155..103571 + 138 115358062 - Bamb_3311 - succinate dehydrogenase, cytochrome b subunit 93 62.33 -1 103576..103944 + 122 115358063 - Bamb_3312 - succinate dehydrogenase, cytochrome b subunit 94 65.32 0 103948..105723 + 591 115358064 sdhA Bamb_3313 - succinate dehydrogenase flavoprotein subunit 95 62.54 -1 105745..106446 + 233 115358065 sdhB Bamb_3314 - succinate dehydrogenase iron-sulfur subunit 96 60.81 -1 106453..106725 + 90 115358066 - Bamb_3315 - hypothetical protein 97 60.75 -1 106792..108093 + 433 115358067 gltA Bamb_3316 - type II citrate synthase 98 72.76 +1 108183..109166 - 327 115358068 - Bamb_3317 - AraC family transcriptional regulator 99 68.21 0 109238..109627 + 129 115358069 - Bamb_3318 - glyoxalase/bleomycin resistance protein/dioxygenase 100 70.10 0 109739..110992 + 417 115358070 - Bamb_3319 - hypothetical protein 101 69.13 0 111217..111987 + 256 115358071 - Bamb_3320 - dimethylargininase 102 64.09 0 112089..112553 + 154 115358072 - Bamb_3321 - AsnC family transcriptional regulator 103 66.54 0 112694..114229 + 511 115358073 - Bamb_3322 - amino acid permease-associated region 104 65.43 0 114431..115156 - 241 115358074 - Bamb_3323 - glutathione S-transferase domain-containing protein 105 67.57 0 115284..115616 - 110 115358075 - Bamb_3324 - cupin 2 domain-containing protein 106 58.83 -1 115836..116882 - 348 115358076 - Bamb_3325 - hypothetical protein 107 57.66 -2 117318..118172 - 284 115358077 - Bamb_3326 - xylose isomerase domain-containing protein 108 59.01 -1 118514..119479 + 321 115358078 - Bamb_3327 - periplasmic binding protein/LacI transcriptional regulator 109 61.02 -1 119611..120690 + 359 115358079 - Bamb_3328 - oxidoreductase domain-containing protein 110 59.60 -1 121149..122732 + 527 115358080 - Bamb_3329 - ABC transporter related 111 61.33 -1 122725..123735 + 336 115358081 - Bamb_3330 - inner-membrane translocator 112 59.08 -1 123750..124724 + 324 115358082 - Bamb_3331 - inner-membrane translocator 113 58.01 -2 124976..125899 - 307 115358083 - Bamb_3332 - LysR family transcriptional regulator 114 58.73 -2 126199..127080 + 293 115358084 - Bamb_3333 - catechol 1,2-dioxygenase 115 55.56 -2 127077..127427 + 116 115358085 - Bamb_3334 - stress responsive alpha-beta barrel domain-containing protein 116 62.67 -1 127414..128490 + 358 115358086 - Bamb_3335 - iron-containing alcohol dehydrogenase 117 53.68 -2 128535..128819 + 94 115358087 - Bamb_3336 - YciI-like protein 118 60.57 -1 128973..129776 + 267 115358088 - Bamb_3337 - short-chain dehydrogenase/reductase SDR 119 60.22 -1 130208..131200 + 330 115358089 - Bamb_3338 - inositol 2-dehydrogenase 120 59.74 -1 131309..132217 + 302 115358090 - Bamb_3339 - LysR family transcriptional regulator 121 66.45 0 132441..133850 + 469 115358091 - Bamb_3340 - isopropylmalate isomerase large subunit 122 72.11 +1 133854..134000 + 48 115358092 - Bamb_3341 - entericidin EcnAB 123 63.44 0 134066..134716 + 216 115358093 leuD Bamb_3342 - isopropylmalate isomerase small subunit 124 66.39 0 134792..135859 + 355 115358094 - Bamb_3343 - 3-isopropylmalate dehydrogenase 125 64.35 0 136181..137302 + 373 115358095 - Bamb_3344 - aspartate-semialdehyde dehydrogenase 126 73.53 +1 137569..139653 + 694 115358096 - Bamb_3345 - hypothetical protein 127 68.51 0 139653..140465 + 270 115358097 truA Bamb_3346 - tRNA pseudouridine synthase A 128 69.09 0 140462..141163 + 233 115358098 - Bamb_3347 - N-(5'-phosphoribosyl)anthranilate isomerase 129 66.42 0 141220..142413 + 397 115358099 - Bamb_3348 - tryptophan synthase subunit beta 130 65.61 0 142421..143272 + 283 115358100 - Bamb_3349 - DNA methylase N-4/N-6 domain-containing protein 131 69.11 0 143314..144132 + 272 115358101 trpA Bamb_3350 - tryptophan synthase subunit alpha 132 65.86 0 144199..145071 + 290 115358102 - Bamb_3351 - acetyl-CoA carboxylase subunit beta 133 67.51 0 145172..146482 + 436 115358103 - Bamb_3352 - FolC bifunctional protein 134 72.14 +1 146512..147369 + 285 115358104 - Bamb_3353 - sporulation domain-containing protein 135 65.86 0 147376..147870 + 164 115358105 - Bamb_3354 - colicin V production protein 136 64.84 0 147922..149454 + 510 115358106 - Bamb_3355 - amidophosphoribosyltransferase 137 66.67 0 149673..150905 + 410 115358107 - Bamb_3356 - O-succinylhomoserine sulfhydrylase 138 70.69 0 151001..151969 - 322 115358108 - Bamb_3357 - NAD-dependent epimerase/dehydratase 139 65.14 0 151956..153002 - 348 115358109 - Bamb_3358 - GDP-mannose 4,6-dehydratase 140 69.30 0 153038..154102 - 354 115358110 - Bamb_3359 - acyltransferase 3 141 68.74 0 154572..156788 + 738 115358111 - Bamb_3361 - hypothetical protein 142 66.33 0 156830..158296 + 488 115358112 - Bamb_3362 - polysaccharide biosynthesis protein 143 59.83 -1 158310..159362 - 350 115358113 - Bamb_3363 - IS605 family transposase OrfB 144 70.03 0 159479..161947 + 822 115358114 - Bamb_3364 - glycosyl transferase, group 1 145 68.03 0 162364..163539 - 391 115358115 - Bamb_3365 - acyltransferase 3 146 62.50 -1 163753..163896 + 47 115358116 - Bamb_3366 - hypothetical protein 147 64.19 0 164126..165013 + 295 115358117 - Bamb_3367 - UTP-glucose-1-phosphate uridylyltransferase 148 68.57 0 165223..165537 + 104 115358118 - Bamb_3368 - hypothetical protein 149 67.20 0 165501..166619 - 372 115358119 - Bamb_3369 - acyltransferase 3 150 57.14 -2 166646..167107 - 153 115358120 - Bamb_3370 - acyltransferase family protein 151 63.19 0 167138..167425 - 95 115358121 - Bamb_3371 - acyltransferase family protein 152 67.93 0 167797..168192 + 131 115358122 - Bamb_3372 - streptomycin 3''-adenylyltransferase 153 66.46 0 168645..169118 - 157 115358123 - Bamb_3373 - 3-demethylubiquinone-9 3-methyltransferase 154 64.51 0 169507..170664 - 385 115358124 - Bamb_3374 - porin 155 67.52 0 171109..172041 - 310 115358125 - Bamb_3375 - putative ribonuclease BN 156 62.77 -1 172181..172771 + 196 115358126 - Bamb_3376 - formate dehydrogenase 157 63.71 0 172784..175252 + 822 115358127 - Bamb_3377 - formate dehydrogenase, alpha subunit 158 65.79 0 175263..176177 + 304 115358128 - Bamb_3378 - formate dehydrogenase, beta subunit 159 63.16 0 176174..176800 + 208 115358129 - Bamb_3379 - formate dehydrogenase, gamma subunit 160 67.26 0 176827..177843 + 338 115358130 - Bamb_3380 - formate dehydrogenase accessory protein FdhE 161 70.08 0 177920..179356 + 478 115358131 - Bamb_3381 - selenocysteine synthase 162 71.13 +1 179357..181282 + 641 115358132 - Bamb_3382 - selenocysteine-specific translation elongation factor 163 63.52 0 181580..182596 - 338 115358133 - Bamb_3383 - dTDP-glucose 4,6-dehydratase 164 69.94 0 182593..183477 - 294 115358134 - Bamb_3384 - dTDP-4-dehydrorhamnose reductase 165 68.38 0 183474..184055 - 193 115358135 - Bamb_3385 - dTDP-4-dehydrorhamnose 3,5-epimerase 166 64.10 0 184052..184948 - 298 115358136 - Bamb_3386 - glucose-1-phosphate thymidylyltransferase 167 69.17 0 185048..186445 - 465 115358137 - Bamb_3387 - major facilitator transporter 168 68.47 0 186442..187161 - 239 115358138 - Bamb_3388 - ABC transporter related 169 69.21 0 187158..187943 - 261 115358139 - Bamb_3389 - ABC transporter related 170 71.85 +1 187940..188827 - 295 115358140 - Bamb_3390 - inner-membrane translocator 171 68.12 0 188820..189713 - 297 115358141 - Bamb_3391 - inner-membrane translocator 172 67.39 0 189749..190849 - 366 115358142 - Bamb_3392 - extracellular ligand-binding receptor 173 64.67 0 191168..191518 + 116 115358143 - Bamb_3393 - endoribonuclease L-PSP 174 66.59 0 191596..192840 + 414 115358144 - Bamb_3394 - FAD dependent oxidoreductase 175 69.00 0 192837..193652 + 271 115358145 - Bamb_3395 - Asp/Glu racemase 176 62.25 -1 193742..194443 + 233 115358146 - Bamb_3396 - GntR family transcriptional regulator 177 65.31 0 194598..195482 + 294 115358147 - Bamb_3397 - rhamnosyltransferase 178 66.88 0 195561..196496 + 311 115358148 - Bamb_3398 - dihydrodipicolinate synthetase 179 65.73 0 196602..197780 + 392 115358149 - Bamb_3399 - mandelate racemase/muconate lactonizing protein 180 67.68 0 197799..198587 + 262 115358150 - Bamb_3400 - short-chain dehydrogenase/reductase SDR 181 61.37 -1 198599..198919 + 106 115358151 - Bamb_3401 - L-rhamnose 1-epimerase 66.96 MEAN 4.07 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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