version 1.0
Burkholderia cepacia AMMD chromosome 2, complete sequence - 1..2646969 2346 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1228 70.07 0 1390018..1390782 - 254 115359198 - Bamb_4451 - short-chain dehydrogenase/reductase SDR 1229 70.10 0 1391456..1391746 + 96 115359199 - Bamb_4452 - hypothetical protein 1230 65.02 0 1393112..1393414 + 100 115359200 - Bamb_4454 - hypothetical protein 1231 68.50 0 1393607..1394803 - 398 115359201 - Bamb_4455 - gamma-butyrobetaine dioxygenase 1232 71.47 +1 1394826..1395782 - 318 115359202 - Bamb_4456 - alpha/beta hydrolase domain-containing protein 1233 68.51 0 1395808..1396296 - 162 115359203 - Bamb_4457 - thioesterase-like protein 1234 68.63 0 1396303..1397268 - 321 115359204 - Bamb_4458 - 3-hydroxybutyryl-CoA dehydrogenase 1235 68.60 0 1397358..1398287 - 309 115359205 - Bamb_4459 - hypothetical protein 1236 64.57 0 1398390..1399343 - 317 115359206 - Bamb_4460 - substrate-binding region of ABC-type glycine betaine transport system 1237 66.46 0 1399653..1400624 - 323 115359207 - Bamb_4461 - LysR family transcriptional regulator 1238 65.84 0 1400758..1403058 + 766 115359208 - Bamb_4462 - malic enzyme 1239 57.67 -2 1403548..1404747 + 399 115359209 - Bamb_4463 - major facilitator transporter 1240 62.42 -1 1405028..1406182 - 384 115359210 - Bamb_4464 - aminotransferase, class V 1241 67.57 0 1406483..1408255 + 590 115359211 - Bamb_4465 - sulfate transporter 1242 65.36 0 1408399..1409925 + 508 115359212 - Bamb_4466 - CHAD domain-containing protein 1243 69.76 0 1409954..1410502 - 182 115359213 - Bamb_4467 - cytochrome c, class I 1244 66.27 0 1410499..1410999 - 166 115359214 - Bamb_4468 - cytochrome c, class I 1245 64.29 0 1410996..1411541 - 181 115359215 - Bamb_4469 - amine dehydrogenase 1246 66.04 0 1411581..1412216 - 211 115359216 - Bamb_4470 - methylamine dehydrogenase accessory protein MauD 1247 69.73 0 1412213..1412767 - 184 115359217 - Bamb_4471 - hypothetical protein 1248 65.98 0 1412775..1413932 - 385 115359218 - Bamb_4472 - amine dehydrogenase 1249 68.12 0 1414175..1415137 + 320 115359219 - Bamb_4473 - AraC family transcriptional regulator 1250 68.68 0 1415271..1416215 + 314 115359220 - Bamb_4474 - AraC family transcriptional regulator 1251 68.30 0 1416694..1418412 + 572 115359221 - Bamb_4475 - propeptide, peptidase M4 and M36 1252 66.43 0 1418489..1419742 + 417 115359222 - Bamb_4476 - leucyl aminopeptidase 1253 66.67 0 1419852..1420220 + 122 115359223 - Bamb_4477 - hypothetical protein 1254 68.61 0 1420242..1420961 - 239 115359224 - Bamb_4478 - PepSY-associated TM helix domain-containing protein 1255 66.37 0 1420958..1421641 - 227 115359225 - Bamb_4479 - putative hydroxylase 1256 65.58 0 1421686..1423890 - 734 115359226 - Bamb_4480 - TonB-dependent siderophore receptor 1257 70.26 0 1424412..1425662 - 416 115359227 - Bamb_4481 - major facilitator transporter 1258 63.86 0 1425899..1427038 - 379 115359228 - Bamb_4482 - porin 1259 68.32 0 1427295..1428263 - 322 115359229 - Bamb_4483 - substrate-binding region of ABC-type glycine betaine transport system 1260 69.99 0 1428308..1429843 - 511 115359230 - Bamb_4484 - sulfatase 1261 72.17 +1 1430045..1430971 + 308 115359231 - Bamb_4485 - LysR family transcriptional regulator 1262 65.54 0 1431169..1432053 + 294 115359232 - Bamb_4486 - formyltetrahydrofolate deformylase 1263 64.07 0 1432214..1433869 - 551 115359233 - Bamb_4487 - amino acid permease-associated region 1264 63.77 0 1434048..1434911 - 287 115359234 - Bamb_4488 - substrate-binding region of ABC-type glycine betaine transport system 1265 65.71 0 1435045..1436193 - 382 115359235 - Bamb_4489 - oxidoreductase FAD-binding subunit 1266 63.12 0 1436306..1437547 - 413 115359236 - Bamb_4490 - Rieske (2Fe-2S) domain-containing protein 1267 70.74 0 1437601..1438386 - 261 115359237 - Bamb_4491 - electron transfer flavoprotein beta-subunit 1268 71.20 +1 1438383..1439552 - 389 115359238 - Bamb_4492 - electron transfer flavoprotein, alpha subunit 1269 69.99 0 1439557..1441482 - 641 115359239 - Bamb_4493 - hypothetical protein 1270 66.28 0 1441485..1443548 - 687 115359240 - Bamb_4494 - NADH:flavin oxidoreductase/NADH oxidase 1271 64.79 0 1443623..1444156 - 177 115359241 - Bamb_4495 - 4-vinyl reductase, 4VR 1272 61.21 -1 1444290..1445261 - 323 115359242 - Bamb_4496 - membrane dipeptidase 1273 67.84 0 1445304..1446578 - 424 115359243 - Bamb_4497 - serine hydroxymethyltransferase 1274 66.86 0 1447026..1448048 + 340 115359244 - Bamb_4498 - AraC family transcriptional regulator 1275 65.11 0 1448104..1449516 - 470 115359245 - Bamb_4499 - coagulation factor 5/8 type domain-containing protein 1276 68.22 0 1449802..1451220 + 472 115359246 - Bamb_4500 - GntR family transcriptional regulator 1277 72.86 +1 1451228..1452067 + 279 115359247 - Bamb_4501 - hypothetical protein 1278 66.17 0 1452146..1453342 - 398 115359248 - Bamb_4502 - alcohol dehydrogenase 1279 71.62 +1 1453617..1454807 - 396 115359249 - Bamb_4503 - secretion protein HlyD family protein 1280 72.17 +1 1454807..1456624 - 605 115359250 - Bamb_4504 - RND efflux system outer membrane lipoprotein 1281 70.29 0 1456633..1457571 - 312 115359251 - Bamb_4505 - rhamnosyltransferase 1282 67.92 0 1457582..1459174 - 530 115359252 - Bamb_4506 - EmrB/QacA family drug resistance transporter 1283 72.51 +1 1459171..1460454 - 427 115359253 - Bamb_4507 - glycosyl transferase family protein 1284 68.25 0 1460474..1461043 - 189 115359254 - Bamb_4508 - isoprenylcysteine carboxyl methyltransferase 1285 68.44 0 1461095..1461997 - 300 115359255 - Bamb_4509 - alpha/beta hydrolase fold 1286 68.72 0 1462721..1463305 + 194 115359256 - Bamb_4510 - transcriptional regulator BetI 1287 67.62 0 1463337..1464806 + 489 115359257 - Bamb_4511 - betaine aldehyde dehydrogenase 1288 67.61 0 1464829..1466529 + 566 115359258 - Bamb_4512 - choline dehydrogenase 1289 71.56 +1 1466611..1467735 - 374 115359259 - Bamb_4513 - hypothetical protein 1290 64.68 0 1467966..1468469 - 167 115359260 - Bamb_4514 - hypothetical protein 1291 65.21 0 1468593..1469417 - 274 115359261 - Bamb_4515 - OmpW family protein 1292 68.26 0 1469492..1470745 - 417 115359262 - Bamb_4516 - hypothetical protein 1293 65.73 0 1470817..1472415 - 532 115359263 - Bamb_4517 - hypothetical protein 1294 70.18 0 1472415..1472699 - 94 115359264 - Bamb_4518 - hypothetical protein 1295 53.25 -2 1472930..1473175 - 81 115359265 - Bamb_4519 - hypothetical protein 1296 66.35 0 1473278..1474222 + 314 115359266 - Bamb_4520 - ABC transporter related 1297 63.29 0 1474228..1474998 + 256 115359267 - Bamb_4521 - ABC-2 type transporter 1298 67.94 0 1475167..1475871 + 234 115359268 - Bamb_4522 - beta-lactamase domain-containing protein 1299 66.23 0 1475920..1476150 - 76 115359269 - Bamb_4523 - hypothetical protein 1300 68.98 0 1476304..1478073 + 589 115359270 - Bamb_4524 - PAS/PAC sensor hybrid histidine kinase 1301 63.19 0 1478332..1478763 + 143 115359271 - Bamb_4525 - DGPFAETKE family protein 1302 68.29 0 1478973..1479833 + 286 115359272 - Bamb_4526 - putative esterase 1303 68.90 0 1479949..1480887 + 312 115359273 - Bamb_4527 - LysR family transcriptional regulator 1304 67.26 0 1480999..1482006 + 335 115359274 - Bamb_4528 - aldo/keto reductase 1305 64.07 0 1482126..1482356 - 76 115359275 - Bamb_4529 - hypothetical protein 1306 70.65 0 1482634..1483536 - 300 115359276 - Bamb_4530 - hypothetical protein 1307 64.66 0 1483606..1483953 + 115 115359277 - Bamb_4531 - hypothetical protein 1308 70.65 0 1484562..1486517 + 651 115359278 - Bamb_4532 - x-prolyl-dipeptidyl aminopeptidase 1309 63.39 0 1486565..1486900 + 111 115359279 - Bamb_4533 - hypothetical protein 1310 68.92 0 1486917..1487849 - 310 115359280 - Bamb_4534 - D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 1311 65.69 0 1488016..1488936 + 306 115359281 - Bamb_4535 - substrate-binding region of ABC-type glycine betaine transport system 1312 72.01 +1 1488933..1490111 + 392 115359282 - Bamb_4536 - binding-protein-dependent transport systems inner membrane component 1313 70.50 0 1490108..1491046 + 312 115359283 - Bamb_4537 - ABC transporter related 1314 72.40 +1 1491043..1491810 + 255 115359284 - Bamb_4538 - binding-protein-dependent transport systems inner membrane component 1315 66.37 0 1492030..1492704 + 224 115359285 - Bamb_4539 - lytic transglycosylase, catalytic 1316 63.56 0 1492900..1494252 - 450 115359286 - Bamb_4540 - HipA domain-containing protein 1317 67.28 0 1494252..1494578 - 108 115359287 - Bamb_4541 - XRE family transcriptional regulator 1318 69.35 0 1494822..1495268 - 148 115359288 - Bamb_4542 - dihydroneopterin aldolase 1319 68.57 0 1495265..1495894 - 209 115359289 - Bamb_4543 - sarcosine oxidase, gamma subunit 1320 67.23 0 1495884..1498895 - 1003 115359290 - Bamb_4544 - sarcosine oxidase alpha subunit family protein 1321 64.74 0 1498892..1499203 - 103 115359291 - Bamb_4545 - sarcosine oxidase, delta subunit, heterotetrameric 1322 65.62 0 1499229..1500473 - 414 115359292 - Bamb_4546 - sarcosine oxidase beta subunit family protein 1323 66.67 0 1500489..1501874 - 461 115359293 - Bamb_4547 - L-serine dehydratase 1 1324 68.99 0 1502137..1503210 + 357 115359294 - Bamb_4548 - AraC family transcriptional regulator 1325 69.08 0 1503416..1504120 + 234 115359295 - Bamb_4549 - GntR domain-containing protein 1326 70.37 0 1504191..1505081 + 296 115359296 - Bamb_4550 - 3-hydroxyisobutyrate dehydrogenase 1327 70.52 0 1505101..1506399 + 432 115359297 - Bamb_4551 - type III effector Hrp-dependent outers 66.96 MEAN 4.07 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0