version 1.0
Burkholderia cepacia AMMD chromosome 2, complete sequence - 1..2646969 2346 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1202 65.75 0 1360020..1361006 - 328 115359172 - Bamb_4425 - hypothetical protein 1203 61.25 -1 1361036..1362013 - 325 115359173 - Bamb_4426 - hypothetical protein 1204 65.02 0 1362146..1362997 + 283 115359174 - Bamb_4427 - LysR family transcriptional regulator 1205 67.09 0 1363089..1363790 - 233 115359175 - Bamb_4428 - ABC transporter related 1206 66.54 0 1363790..1364563 - 257 115359176 livG Bamb_4429 - leucine/isoleucine/valine transporter ATP-binding subunit 1207 66.51 0 1364560..1365831 - 423 115359177 livM Bamb_4430 - leucine/isoleucine/valine transporter permease subunit 1208 65.05 0 1365843..1366769 - 308 115359178 - Bamb_4431 - inner-membrane translocator 1209 64.43 0 1366942..1368060 - 372 115359179 - Bamb_4432 - extracellular ligand-binding receptor 1210 61.46 -1 1368822..1369493 + 223 115359180 - Bamb_4433 - hypothetical protein 1211 46.69 -2 1370047..1371603 + 518 115359181 - Bamb_4434 - hypothetical protein 1212 65.89 0 1371940..1372452 - 170 115359182 - Bamb_4435 - OmpA/MotB domain-containing protein 1213 68.09 0 1372537..1373805 - 422 115359183 - Bamb_4436 - diguanylate cyclase 1214 69.92 0 1373802..1374509 - 235 115359184 - Bamb_4437 - hypothetical protein 1215 64.30 0 1374957..1375844 + 295 115359185 - Bamb_4438 - LysR family transcriptional regulator 1216 68.89 0 1376006..1377442 + 478 115359186 - Bamb_4439 - N-acyl-D-amino-acid deacylase 1217 66.82 0 1377533..1378873 + 446 115359187 - Bamb_4440 - major facilitator transporter 1218 71.07 +1 1378888..1380228 + 446 115359188 - Bamb_4441 - amidase 1219 70.13 0 1380345..1381586 + 413 115359189 - Bamb_4442 - D-amino-acid dehydrogenase 1220 66.80 0 1381597..1382358 - 253 115359190 - Bamb_4443 - GntR domain-containing protein 1221 70.59 0 1382430..1383320 - 296 115359191 - Bamb_4444 - amidohydrolase 2 1222 64.65 0 1383364..1384305 - 313 115359192 - Bamb_4445 - periplasmic binding protein/LacI transcriptional regulator 1223 67.05 0 1384383..1385420 - 345 115359193 - Bamb_4446 - inner-membrane translocator 1224 67.83 0 1385437..1386978 - 513 115359194 - Bamb_4447 - ABC transporter related 1225 68.34 0 1386991..1387767 - 258 115359195 - Bamb_4448 - short chain dehydrogenase 1226 67.37 0 1387821..1389098 - 425 115359196 - Bamb_4449 - mandelate racemase/muconate lactonizing protein 1227 68.09 0 1389122..1389964 - 280 115359197 - Bamb_4450 - 5-carboxymethyl-2-hydroxymuconate delta-isomerase 1228 70.07 0 1390018..1390782 - 254 115359198 - Bamb_4451 - short-chain dehydrogenase/reductase SDR 1229 70.10 0 1391456..1391746 + 96 115359199 - Bamb_4452 - hypothetical protein 1230 65.02 0 1393112..1393414 + 100 115359200 - Bamb_4454 - hypothetical protein 1231 68.50 0 1393607..1394803 - 398 115359201 - Bamb_4455 - gamma-butyrobetaine dioxygenase 1232 71.47 +1 1394826..1395782 - 318 115359202 - Bamb_4456 - alpha/beta hydrolase domain-containing protein 1233 68.51 0 1395808..1396296 - 162 115359203 - Bamb_4457 - thioesterase-like protein 1234 68.63 0 1396303..1397268 - 321 115359204 - Bamb_4458 - 3-hydroxybutyryl-CoA dehydrogenase 1235 68.60 0 1397358..1398287 - 309 115359205 - Bamb_4459 - hypothetical protein 1236 64.57 0 1398390..1399343 - 317 115359206 - Bamb_4460 - substrate-binding region of ABC-type glycine betaine transport system 1237 66.46 0 1399653..1400624 - 323 115359207 - Bamb_4461 - LysR family transcriptional regulator 1238 65.84 0 1400758..1403058 + 766 115359208 - Bamb_4462 - malic enzyme 1239 57.67 -2 1403548..1404747 + 399 115359209 - Bamb_4463 - major facilitator transporter 1240 62.42 -1 1405028..1406182 - 384 115359210 - Bamb_4464 - aminotransferase, class V 1241 67.57 0 1406483..1408255 + 590 115359211 - Bamb_4465 - sulfate transporter 1242 65.36 0 1408399..1409925 + 508 115359212 - Bamb_4466 - CHAD domain-containing protein 1243 69.76 0 1409954..1410502 - 182 115359213 - Bamb_4467 - cytochrome c, class I 1244 66.27 0 1410499..1410999 - 166 115359214 - Bamb_4468 - cytochrome c, class I 1245 64.29 0 1410996..1411541 - 181 115359215 - Bamb_4469 - amine dehydrogenase 1246 66.04 0 1411581..1412216 - 211 115359216 - Bamb_4470 - methylamine dehydrogenase accessory protein MauD 1247 69.73 0 1412213..1412767 - 184 115359217 - Bamb_4471 - hypothetical protein 1248 65.98 0 1412775..1413932 - 385 115359218 - Bamb_4472 - amine dehydrogenase 1249 68.12 0 1414175..1415137 + 320 115359219 - Bamb_4473 - AraC family transcriptional regulator 1250 68.68 0 1415271..1416215 + 314 115359220 - Bamb_4474 - AraC family transcriptional regulator 1251 68.30 0 1416694..1418412 + 572 115359221 - Bamb_4475 - propeptide, peptidase M4 and M36 1252 66.43 0 1418489..1419742 + 417 115359222 - Bamb_4476 - leucyl aminopeptidase 1253 66.67 0 1419852..1420220 + 122 115359223 - Bamb_4477 - hypothetical protein 1254 68.61 0 1420242..1420961 - 239 115359224 - Bamb_4478 - PepSY-associated TM helix domain-containing protein 1255 66.37 0 1420958..1421641 - 227 115359225 - Bamb_4479 - putative hydroxylase 1256 65.58 0 1421686..1423890 - 734 115359226 - Bamb_4480 - TonB-dependent siderophore receptor 1257 70.26 0 1424412..1425662 - 416 115359227 - Bamb_4481 - major facilitator transporter 1258 63.86 0 1425899..1427038 - 379 115359228 - Bamb_4482 - porin 1259 68.32 0 1427295..1428263 - 322 115359229 - Bamb_4483 - substrate-binding region of ABC-type glycine betaine transport system 1260 69.99 0 1428308..1429843 - 511 115359230 - Bamb_4484 - sulfatase 1261 72.17 +1 1430045..1430971 + 308 115359231 - Bamb_4485 - LysR family transcriptional regulator 1262 65.54 0 1431169..1432053 + 294 115359232 - Bamb_4486 - formyltetrahydrofolate deformylase 1263 64.07 0 1432214..1433869 - 551 115359233 - Bamb_4487 - amino acid permease-associated region 1264 63.77 0 1434048..1434911 - 287 115359234 - Bamb_4488 - substrate-binding region of ABC-type glycine betaine transport system 1265 65.71 0 1435045..1436193 - 382 115359235 - Bamb_4489 - oxidoreductase FAD-binding subunit 1266 63.12 0 1436306..1437547 - 413 115359236 - Bamb_4490 - Rieske (2Fe-2S) domain-containing protein 1267 70.74 0 1437601..1438386 - 261 115359237 - Bamb_4491 - electron transfer flavoprotein beta-subunit 1268 71.20 +1 1438383..1439552 - 389 115359238 - Bamb_4492 - electron transfer flavoprotein, alpha subunit 1269 69.99 0 1439557..1441482 - 641 115359239 - Bamb_4493 - hypothetical protein 1270 66.28 0 1441485..1443548 - 687 115359240 - Bamb_4494 - NADH:flavin oxidoreductase/NADH oxidase 1271 64.79 0 1443623..1444156 - 177 115359241 - Bamb_4495 - 4-vinyl reductase, 4VR 1272 61.21 -1 1444290..1445261 - 323 115359242 - Bamb_4496 - membrane dipeptidase 1273 67.84 0 1445304..1446578 - 424 115359243 - Bamb_4497 - serine hydroxymethyltransferase 1274 66.86 0 1447026..1448048 + 340 115359244 - Bamb_4498 - AraC family transcriptional regulator 1275 65.11 0 1448104..1449516 - 470 115359245 - Bamb_4499 - coagulation factor 5/8 type domain-containing protein 1276 68.22 0 1449802..1451220 + 472 115359246 - Bamb_4500 - GntR family transcriptional regulator 1277 72.86 +1 1451228..1452067 + 279 115359247 - Bamb_4501 - hypothetical protein 1278 66.17 0 1452146..1453342 - 398 115359248 - Bamb_4502 - alcohol dehydrogenase 1279 71.62 +1 1453617..1454807 - 396 115359249 - Bamb_4503 - secretion protein HlyD family protein 1280 72.17 +1 1454807..1456624 - 605 115359250 - Bamb_4504 - RND efflux system outer membrane lipoprotein 1281 70.29 0 1456633..1457571 - 312 115359251 - Bamb_4505 - rhamnosyltransferase 1282 67.92 0 1457582..1459174 - 530 115359252 - Bamb_4506 - EmrB/QacA family drug resistance transporter 1283 72.51 +1 1459171..1460454 - 427 115359253 - Bamb_4507 - glycosyl transferase family protein 1284 68.25 0 1460474..1461043 - 189 115359254 - Bamb_4508 - isoprenylcysteine carboxyl methyltransferase 1285 68.44 0 1461095..1461997 - 300 115359255 - Bamb_4509 - alpha/beta hydrolase fold 1286 68.72 0 1462721..1463305 + 194 115359256 - Bamb_4510 - transcriptional regulator BetI 1287 67.62 0 1463337..1464806 + 489 115359257 - Bamb_4511 - betaine aldehyde dehydrogenase 1288 67.61 0 1464829..1466529 + 566 115359258 - Bamb_4512 - choline dehydrogenase 1289 71.56 +1 1466611..1467735 - 374 115359259 - Bamb_4513 - hypothetical protein 1290 64.68 0 1467966..1468469 - 167 115359260 - Bamb_4514 - hypothetical protein 1291 65.21 0 1468593..1469417 - 274 115359261 - Bamb_4515 - OmpW family protein 1292 68.26 0 1469492..1470745 - 417 115359262 - Bamb_4516 - hypothetical protein 1293 65.73 0 1470817..1472415 - 532 115359263 - Bamb_4517 - hypothetical protein 1294 70.18 0 1472415..1472699 - 94 115359264 - Bamb_4518 - hypothetical protein 1295 53.25 -2 1472930..1473175 - 81 115359265 - Bamb_4519 - hypothetical protein 1296 66.35 0 1473278..1474222 + 314 115359266 - Bamb_4520 - ABC transporter related 1297 63.29 0 1474228..1474998 + 256 115359267 - Bamb_4521 - ABC-2 type transporter 1298 67.94 0 1475167..1475871 + 234 115359268 - Bamb_4522 - beta-lactamase domain-containing protein 1299 66.23 0 1475920..1476150 - 76 115359269 - Bamb_4523 - hypothetical protein 1300 68.98 0 1476304..1478073 + 589 115359270 - Bamb_4524 - PAS/PAC sensor hybrid histidine kinase 1301 63.19 0 1478332..1478763 + 143 115359271 - Bamb_4525 - DGPFAETKE family protein 66.96 MEAN 4.07 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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