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Burkholderia cepacia AMMD chromosome 2, complete sequence - 1..2646969 2346 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1052 66.73 0 1196413..1197927 + 504 115359022 - Bamb_4273 - spermidine synthase 1053 71.42 +1 1197927..1199546 + 539 115359023 - Bamb_4274 - hypothetical protein 1054 69.69 0 1199695..1200456 + 253 115359024 - Bamb_4275 - cell wall hydrolase/autolysin 1055 64.36 0 1200506..1200895 + 129 115359025 - Bamb_4276 - hypothetical protein 1056 65.90 0 1200974..1201498 + 174 115359026 - Bamb_4277 - GCN5-related N-acetyltransferase 1057 67.11 0 1201846..1203192 - 448 115359027 - Bamb_4278 - glutamine synthetase, catalytic region 1058 66.31 0 1203339..1203896 - 185 115359028 - Bamb_4279 - XRE family transcriptional regulator 1059 70.89 0 1203922..1205247 - 441 115359029 - Bamb_4280 - FAD dependent oxidoreductase 1060 62.33 -1 1205501..1205938 - 145 115359030 - Bamb_4281 - AsnC family transcriptional regulator 1061 68.60 0 1205935..1206864 - 309 115359031 - Bamb_4282 - homocysteine S-methyltransferase 1062 64.62 0 1206968..1208137 - 389 115359032 - Bamb_4283 - cystathionine gamma-synthase 1063 64.66 0 1208182..1208877 - 231 115359033 - Bamb_4284 - polar amino acid ABC transporter, inner membrane subunit 1064 62.83 -1 1208891..1209568 - 225 115359034 - Bamb_4285 - polar amino acid ABC transporter, inner membrane subunit 1065 63.46 0 1209640..1210419 - 259 115359035 - Bamb_4286 - extracellular solute-binding protein 1066 63.16 0 1210451..1211248 - 265 115359036 - Bamb_4287 - ABC transporter related 1067 67.71 0 1211329..1212759 - 476 115359037 - Bamb_4288 - aldehyde dehydrogenase 1068 66.49 0 1212756..1213880 - 374 115359038 - Bamb_4289 - homoserine dehydrogenase 1069 61.85 -1 1213987..1214484 - 165 115359039 - Bamb_4290 - AsnC family transcriptional regulator 1070 67.65 0 1214516..1215226 - 236 115359040 - Bamb_4291 - hypothetical protein 1071 59.13 -1 1215720..1216064 - 114 115359041 - Bamb_4292 - small multidrug resistance protein 1072 60.21 -1 1216126..1217829 - 567 115359042 - Bamb_4293 - glucose-methanol-choline oxidoreductase 1073 57.86 -2 1217923..1218762 - 279 115359043 - Bamb_4294 - binding-protein-dependent transport systems inner membrane component 1074 59.62 -1 1218767..1220029 - 420 115359044 - Bamb_4295 - binding-protein-dependent transport systems inner membrane component 1075 58.96 -1 1220047..1221084 - 345 115359045 - Bamb_4296 - ABC spermidine/putrescine transporter, periplasmic ligand binding protein 1076 57.08 -2 1221119..1222213 - 364 115359046 - Bamb_4297 - spermidine/putrescine ABC transporter ATPase subunit 1077 61.70 -1 1222393..1224891 - 832 115359047 - Bamb_4298 - L-carnitine dehydratase/bile acid-inducible protein F 1078 58.61 -2 1225163..1226068 - 301 115359048 - Bamb_4299 - LysR family transcriptional regulator 1079 59.10 -1 1226255..1228264 - 669 115359049 - Bamb_4300 - Beta-glucosidase 1080 58.50 -2 1228339..1229820 - 493 115359050 - Bamb_4301 - hypothetical protein 1081 59.94 -1 1230106..1230417 - 103 115359051 - Bamb_4302 - putative methyl-accepting chemotaxis sensory transducer 1082 66.03 0 1230453..1231859 - 468 115359052 - Bamb_4303 - major facilitator transporter 1083 67.56 0 1231979..1233541 - 520 115359053 - Bamb_4304 - monooxygenase, FAD-binding 1084 65.75 0 1233547..1234422 - 291 115359054 - Bamb_4305 - 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase 1085 66.67 0 1234419..1235354 - 311 115359055 - Bamb_4306 - glyoxalase/bleomycin resistance protein/dioxygenase 1086 65.81 0 1235351..1236406 - 351 115359056 - Bamb_4307 - aminocarboxymuconate-semialdehyde decarboxylase 1087 69.25 0 1236399..1236824 - 141 115359057 - Bamb_4308 - hypothetical protein 1088 63.25 0 1236992..1237723 + 243 115359058 - Bamb_4309 - GntR family transcriptional regulator 1089 57.03 -2 1238076..1238843 + 255 115359059 - Bamb_4311 - hypothetical protein 1090 54.74 -2 1238860..1239228 + 122 115359060 - Bamb_4312 - hypothetical protein 1091 66.86 0 1239496..1240524 - 342 115359061 proX Bamb_4313 - glycine betaine transporter periplasmic subunit 1092 66.48 0 1240643..1241170 - 175 115359062 - Bamb_4314 - AsnC family transcriptional regulator 1093 67.14 0 1241321..1241533 - 70 115359063 - Bamb_4315 - succinate-semialdehyde dehydrogenase (NAD(P)+) 1094 64.36 0 1241682..1242071 - 129 115359064 - Bamb_4316 - carboxymuconolactone decarboxylase 1095 65.11 0 1242139..1243167 - 342 115359065 proX Bamb_4317 - glycine betaine transporter periplasmic subunit 1096 69.30 0 1243297..1244247 - 316 115359066 - Bamb_4318 - binding-protein-dependent transport systems inner membrane component 1097 70.03 0 1244240..1245427 - 395 115359067 - Bamb_4319 - glycine betaine/L-proline ABC transporter, ATPase subunit 1098 69.92 0 1245433..1245801 - 122 115359068 - Bamb_4320 - NIPSNAP family protein 1099 71.17 +1 1245798..1246640 - 280 115359069 - Bamb_4321 - alpha/beta hydrolase fold 1100 68.25 0 1246644..1247720 - 358 115359070 - Bamb_4322 - luciferase family protein 1101 68.19 0 1247752..1249263 - 503 115359071 - Bamb_4323 - aldehyde dehydrogenase 1102 69.92 0 1249292..1250275 - 327 115359072 - Bamb_4324 - flavin reductase domain-containing protein 1103 70.48 0 1250740..1252548 - 602 115359073 - Bamb_4325 - hypothetical protein 1104 69.47 0 1252693..1253298 + 201 115359074 - Bamb_4326 - hypothetical protein 1105 72.59 +1 1253400..1254344 + 314 115359075 - Bamb_4327 - D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 1106 67.01 0 1254476..1255651 + 391 115359076 - Bamb_4328 - porin 1107 56.28 -2 1255784..1256746 - 320 115359077 - Bamb_4329 - ferredoxin 1108 55.31 -2 1256786..1257886 - 366 115359078 - Bamb_4330 - vanillate monooxygenase 1109 55.30 -2 1258653..1259549 - 298 115359079 - Bamb_4331 - LysR family transcriptional regulator 1110 65.01 0 1260053..1260415 - 120 115359080 - Bamb_4332 - hypothetical protein 1111 62.93 0 1260449..1260769 + 106 115359081 - Bamb_4333 - hypothetical protein 1112 60.06 -1 1260797..1261870 + 357 115359082 - Bamb_4334 - hypothetical protein 1113 58.99 -1 1261946..1262362 + 138 115359083 - Bamb_4335 - hypothetical protein 1114 60.53 -1 1262854..1263081 + 75 115359084 - Bamb_4336 - hypothetical protein 1115 65.63 0 1263078..1263656 + 192 115359085 - Bamb_4337 - hypothetical protein 1116 68.97 0 1263870..1264607 + 245 115359086 - Bamb_4338 - hypothetical protein 1117 67.36 0 1264734..1265312 - 192 115359087 - Bamb_4339 - NnrU family protein 1118 70.09 0 1265549..1265986 - 145 115359088 - Bamb_4340 - TfoX domain-containing protein 1119 71.62 +1 1265983..1267092 - 369 115359089 - Bamb_4341 - hypothetical protein 1120 69.55 0 1267163..1268617 - 484 115359090 - Bamb_4342 - peptidase M20 1121 74.46 +1 1268768..1269832 - 354 115359091 - Bamb_4343 - 2-nitropropane dioxygenase, NPD 1122 67.26 0 1270277..1271803 + 508 115359092 - Bamb_4344 - arginine:agmatin antiporter 1123 67.35 0 1271806..1274145 + 779 115359093 - Bamb_4345 - lysine decarboxylase 1124 67.04 0 1274215..1275009 - 264 115359094 - Bamb_4346 - hypothetical protein 1125 61.48 -1 1275276..1276181 + 301 115359095 - Bamb_4347 - hypothetical protein 1126 72.00 +1 1276201..1277175 - 324 115359096 ftrA Bamb_4348 - transcriptional activator FtrA 1127 70.00 0 1277287..1277706 + 139 115359097 - Bamb_4349 - rhodanese domain-containing protein 1128 64.22 0 1277797..1278123 + 108 115359098 - Bamb_4350 - hypothetical protein 1129 72.84 +1 1278139..1279320 - 393 115359099 - Bamb_4351 - cytochrome P450-like protein 1130 65.53 0 1279485..1279748 - 87 115359100 - Bamb_4352 - hypothetical protein 1131 71.20 +1 1280081..1280941 - 286 115359101 - Bamb_4353 - PEP phosphonomutase 1132 67.83 0 1281342..1282202 - 286 115359102 - Bamb_4354 - RpiR family transcriptional regulator 1133 64.69 0 1282258..1282611 - 117 115359103 - Bamb_4355 - hypothetical protein 1134 68.02 0 1282837..1283499 + 220 115359104 - Bamb_4356 - two component transcriptional regulator 1135 70.66 0 1283496..1284872 + 458 115359105 - Bamb_4357 - periplasmic sensor signal transduction histidine kinase 1136 67.11 0 1285083..1285529 + 148 115359106 - Bamb_4358 - MarR family transcriptional regulator 1137 61.79 -1 1285568..1285936 + 122 115359107 - Bamb_4359 - antibiotic biosynthesis monooxygenase 1138 71.48 +1 1286725..1287618 - 297 115359108 - Bamb_4360 - Beta-lactamase 1139 70.15 0 1287735..1288625 + 296 115359109 - Bamb_4361 - LysR family transcriptional regulator 1140 67.06 0 1289122..1289373 - 83 115359110 - Bamb_4362 - hypothetical protein 1141 71.38 +1 1289472..1291697 - 741 115359111 - Bamb_4363 - Amylo-alpha-1,6-glucosidase 1142 71.51 +1 1291854..1298969 - 2371 115359112 - Bamb_4364 - outer membrane autotransporter 1143 68.09 0 1299703..1300335 - 210 115359113 - Bamb_4365 - hypothetical protein 1144 71.21 +1 1300568..1301602 - 344 115359114 - Bamb_4366 - cell shape determining protein MreB 1145 69.26 0 1301859..1304249 + 796 115359115 - Bamb_4367 - patatin 1146 68.08 0 1304328..1305458 - 376 115359116 - Bamb_4368 - periplasmic sensor signal transduction histidine kinase 1147 67.08 0 1305523..1306251 - 242 115359117 - Bamb_4369 - two component transcriptional regulator 1148 65.77 0 1306365..1307366 + 333 115359118 - Bamb_4370 - glutaminase 1149 64.39 0 1307534..1308454 + 306 115359119 - Bamb_4371 - LysR family transcriptional regulator 1150 65.25 0 1308584..1309219 + 211 115359120 - Bamb_4372 - isochorismatase hydrolase 1151 64.89 0 1309288..1310019 - 243 115359121 - Bamb_4373 - ribonuclease T2 66.96 MEAN 4.07 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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