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Burkholderia cepacia AMMD chromosome 2, complete sequence - 1..2646969 2346 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1007 67.45 0 1150000..1152045 - 681 115358977 - Bamb_4228 - YscC/HrcC family type III secretion outer membrane protein 1008 65.23 0 1152045..1152323 - 92 115358978 - Bamb_4229 - HrpO family type III secretion protein 1009 69.73 0 1152320..1154569 - 749 115358979 - Bamb_4230 - type III secretion FHIPEP protein 1010 64.63 0 1154763..1155596 - 277 115358980 - Bamb_4231 - LuxR family transcriptional regulator 1011 66.67 0 1155876..1156781 + 301 115358981 - Bamb_4232 - LuxR family transcriptional regulator 1012 67.09 0 1156860..1158506 - 548 115358982 - Bamb_4233 - natural resistance-associated macrophage protein 1013 66.32 0 1158545..1158832 + 95 115358983 - Bamb_4234 - hypothetical protein 1014 71.06 +1 1159810..1160082 + 90 115358984 - Bamb_4235 - hypothetical protein 1015 69.57 0 1160194..1161672 + 492 115358985 - Bamb_4236 - carbohydrate-selective porin OprB 1016 68.32 0 1161766..1163520 - 584 115358986 - Bamb_4237 - Alpha,alpha-trehalase 1017 67.66 0 1163813..1165228 + 471 115358987 - Bamb_4238 - major facilitator transporter 1018 68.56 0 1165577..1166788 + 403 115358988 - Bamb_4239 - hypothetical protein 1019 61.64 -1 1166891..1167109 - 72 115358989 - Bamb_4240 - hypothetical protein 1020 66.44 0 1167165..1167608 - 147 115358990 - Bamb_4241 - GCN5-related N-acetyltransferase 1021 67.44 0 1167736..1168380 + 214 115358991 - Bamb_4242 - hydrolase 1022 65.97 0 1168793..1169365 + 190 115358992 - Bamb_4243 - hypothetical protein 1023 64.00 0 1169483..1170082 - 199 115358993 - Bamb_4244 - GCN5-related N-acetyltransferase 1024 70.16 0 1170193..1171107 - 304 115358994 - Bamb_4245 - DNA-binding transcriptional regulator LysR 1025 67.47 0 1171217..1172455 + 412 115358995 - Bamb_4246 - diaminopimelate decarboxylase 1026 59.45 -1 1172822..1173874 - 350 115358996 - Bamb_4247 - IS605 family transposase OrfB 1027 65.67 0 1174202..1175002 + 266 115358997 - Bamb_4248 - extracellular solute-binding protein 1028 67.27 0 1175077..1175736 + 219 115358998 - Bamb_4249 - polar amino acid ABC transporter, inner membrane subunit 1029 63.70 0 1175733..1176506 + 257 115358999 - Bamb_4250 - ABC transporter related 1030 69.53 0 1176556..1177743 + 395 115359000 - Bamb_4251 - cystathionine beta-lyase 1031 66.67 0 1177822..1178166 + 114 115359001 - Bamb_4252 - hypothetical protein 1032 68.12 0 1178599..1178943 + 114 115359002 - Bamb_4253 - hypothetical protein 1033 73.39 +1 1178945..1179985 + 346 115359003 - Bamb_4254 - hypothetical protein 1034 69.30 0 1180036..1180719 - 227 115359004 - Bamb_4255 - LuxR family transcriptional regulator 1035 66.09 0 1181002..1181694 + 230 115359005 - Bamb_4256 - hypothetical protein 1036 70.76 0 1182124..1182612 + 162 115359006 - Bamb_4257 - hypothetical protein 1037 70.02 0 1182596..1183042 + 148 115359007 - Bamb_4258 - lysozyme 1038 69.35 0 1183374..1184342 + 322 115359008 - Bamb_4259 - poly (3-hydroxybutyrate) depolymerase 1039 73.11 +1 1184398..1184940 + 180 115359009 - Bamb_4260 - hypothetical protein 1040 69.57 0 1184937..1185557 + 206 115359010 - Bamb_4261 - LigA 1041 64.72 0 1185670..1186287 + 205 115359011 - Bamb_4262 - hypothetical protein 1042 63.92 0 1186358..1186975 + 205 115359012 - Bamb_4263 - hypothetical protein 1043 70.61 0 1187034..1187921 - 295 115359013 - Bamb_4264 - hypothetical protein 1044 71.95 +1 1188049..1189506 + 485 115359014 - Bamb_4265 - GntR family transcriptional regulator 1045 66.60 0 1189549..1190982 - 477 115359015 - Bamb_4266 - putative nicotinate phosphoribosyltransferase 1046 65.99 0 1191057..1192097 - 346 115359016 - Bamb_4267 - bifunctional nicotinamide mononucleotide adenylyltransferase/ADP-ribose pyrophosphatase 1047 66.23 0 1192283..1192735 + 150 115359017 - Bamb_4268 - hypothetical protein 1048 72.22 +1 1192743..1193120 - 125 115359018 - Bamb_4269 - S-adenosylmethionine decarboxylase related 1049 68.90 0 1193263..1194783 - 506 115359019 - Bamb_4270 - hypothetical protein 1050 68.07 0 1194793..1195863 - 356 115359020 - Bamb_4271 - putative virion core protein 1051 62.27 -1 1195890..1196276 - 128 115359021 - Bamb_4272 - hypothetical protein 1052 66.73 0 1196413..1197927 + 504 115359022 - Bamb_4273 - spermidine synthase 1053 71.42 +1 1197927..1199546 + 539 115359023 - Bamb_4274 - hypothetical protein 1054 69.69 0 1199695..1200456 + 253 115359024 - Bamb_4275 - cell wall hydrolase/autolysin 1055 64.36 0 1200506..1200895 + 129 115359025 - Bamb_4276 - hypothetical protein 1056 65.90 0 1200974..1201498 + 174 115359026 - Bamb_4277 - GCN5-related N-acetyltransferase 1057 67.11 0 1201846..1203192 - 448 115359027 - Bamb_4278 - glutamine synthetase, catalytic region 1058 66.31 0 1203339..1203896 - 185 115359028 - Bamb_4279 - XRE family transcriptional regulator 1059 70.89 0 1203922..1205247 - 441 115359029 - Bamb_4280 - FAD dependent oxidoreductase 1060 62.33 -1 1205501..1205938 - 145 115359030 - Bamb_4281 - AsnC family transcriptional regulator 1061 68.60 0 1205935..1206864 - 309 115359031 - Bamb_4282 - homocysteine S-methyltransferase 1062 64.62 0 1206968..1208137 - 389 115359032 - Bamb_4283 - cystathionine gamma-synthase 1063 64.66 0 1208182..1208877 - 231 115359033 - Bamb_4284 - polar amino acid ABC transporter, inner membrane subunit 1064 62.83 -1 1208891..1209568 - 225 115359034 - Bamb_4285 - polar amino acid ABC transporter, inner membrane subunit 1065 63.46 0 1209640..1210419 - 259 115359035 - Bamb_4286 - extracellular solute-binding protein 1066 63.16 0 1210451..1211248 - 265 115359036 - Bamb_4287 - ABC transporter related 1067 67.71 0 1211329..1212759 - 476 115359037 - Bamb_4288 - aldehyde dehydrogenase 1068 66.49 0 1212756..1213880 - 374 115359038 - Bamb_4289 - homoserine dehydrogenase 1069 61.85 -1 1213987..1214484 - 165 115359039 - Bamb_4290 - AsnC family transcriptional regulator 1070 67.65 0 1214516..1215226 - 236 115359040 - Bamb_4291 - hypothetical protein 1071 59.13 -1 1215720..1216064 - 114 115359041 - Bamb_4292 - small multidrug resistance protein 1072 60.21 -1 1216126..1217829 - 567 115359042 - Bamb_4293 - glucose-methanol-choline oxidoreductase 1073 57.86 -2 1217923..1218762 - 279 115359043 - Bamb_4294 - binding-protein-dependent transport systems inner membrane component 1074 59.62 -1 1218767..1220029 - 420 115359044 - Bamb_4295 - binding-protein-dependent transport systems inner membrane component 1075 58.96 -1 1220047..1221084 - 345 115359045 - Bamb_4296 - ABC spermidine/putrescine transporter, periplasmic ligand binding protein 1076 57.08 -2 1221119..1222213 - 364 115359046 - Bamb_4297 - spermidine/putrescine ABC transporter ATPase subunit 1077 61.70 -1 1222393..1224891 - 832 115359047 - Bamb_4298 - L-carnitine dehydratase/bile acid-inducible protein F 1078 58.61 -2 1225163..1226068 - 301 115359048 - Bamb_4299 - LysR family transcriptional regulator 1079 59.10 -1 1226255..1228264 - 669 115359049 - Bamb_4300 - Beta-glucosidase 1080 58.50 -2 1228339..1229820 - 493 115359050 - Bamb_4301 - hypothetical protein 1081 59.94 -1 1230106..1230417 - 103 115359051 - Bamb_4302 - putative methyl-accepting chemotaxis sensory transducer 1082 66.03 0 1230453..1231859 - 468 115359052 - Bamb_4303 - major facilitator transporter 1083 67.56 0 1231979..1233541 - 520 115359053 - Bamb_4304 - monooxygenase, FAD-binding 1084 65.75 0 1233547..1234422 - 291 115359054 - Bamb_4305 - 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase 1085 66.67 0 1234419..1235354 - 311 115359055 - Bamb_4306 - glyoxalase/bleomycin resistance protein/dioxygenase 1086 65.81 0 1235351..1236406 - 351 115359056 - Bamb_4307 - aminocarboxymuconate-semialdehyde decarboxylase 1087 69.25 0 1236399..1236824 - 141 115359057 - Bamb_4308 - hypothetical protein 1088 63.25 0 1236992..1237723 + 243 115359058 - Bamb_4309 - GntR family transcriptional regulator 1089 57.03 -2 1238076..1238843 + 255 115359059 - Bamb_4311 - hypothetical protein 1090 54.74 -2 1238860..1239228 + 122 115359060 - Bamb_4312 - hypothetical protein 1091 66.86 0 1239496..1240524 - 342 115359061 proX Bamb_4313 - glycine betaine transporter periplasmic subunit 1092 66.48 0 1240643..1241170 - 175 115359062 - Bamb_4314 - AsnC family transcriptional regulator 1093 67.14 0 1241321..1241533 - 70 115359063 - Bamb_4315 - succinate-semialdehyde dehydrogenase (NAD(P)+) 1094 64.36 0 1241682..1242071 - 129 115359064 - Bamb_4316 - carboxymuconolactone decarboxylase 1095 65.11 0 1242139..1243167 - 342 115359065 proX Bamb_4317 - glycine betaine transporter periplasmic subunit 1096 69.30 0 1243297..1244247 - 316 115359066 - Bamb_4318 - binding-protein-dependent transport systems inner membrane component 1097 70.03 0 1244240..1245427 - 395 115359067 - Bamb_4319 - glycine betaine/L-proline ABC transporter, ATPase subunit 1098 69.92 0 1245433..1245801 - 122 115359068 - Bamb_4320 - NIPSNAP family protein 1099 71.17 +1 1245798..1246640 - 280 115359069 - Bamb_4321 - alpha/beta hydrolase fold 1100 68.25 0 1246644..1247720 - 358 115359070 - Bamb_4322 - luciferase family protein 1101 68.19 0 1247752..1249263 - 503 115359071 - Bamb_4323 - aldehyde dehydrogenase 1102 69.92 0 1249292..1250275 - 327 115359072 - Bamb_4324 - flavin reductase domain-containing protein 1103 70.48 0 1250740..1252548 - 602 115359073 - Bamb_4325 - hypothetical protein 1104 69.47 0 1252693..1253298 + 201 115359074 - Bamb_4326 - hypothetical protein 1105 72.59 +1 1253400..1254344 + 314 115359075 - Bamb_4327 - D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 1106 67.01 0 1254476..1255651 + 391 115359076 - Bamb_4328 - porin 66.96 MEAN 4.07 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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