version 1.0
Burkholderia cepacia AMMD chromosome 2, complete sequence - 1..2646969 2346 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 990 70.51 0 1131757..1133967 + 736 115358960 - Bamb_4211 - aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding 991 59.84 -1 1134076..1135350 - 424 115358961 - Bamb_4212 - filamentation induced by cAMP protein Fic 992 61.40 -1 1135718..1136116 + 132 115358962 - Bamb_4213 - response regulator receiver protein 993 74.52 +1 1136505..1137650 + 381 115358963 - Bamb_4214 - type III secretion system apparatus protein YscQ/HrcQ 994 65.48 0 1137654..1138328 + 224 115358964 - Bamb_4215 - type III secretion system protein 995 72.01 +1 1138325..1139128 + 267 115358965 - Bamb_4216 - lytic transglycosylase, catalytic 996 70.12 0 1139201..1141168 - 655 115358966 - Bamb_4217 - asparagine synthase (glutamine-hydrolyzing) 997 60.08 -1 1141178..1141435 - 85 115358967 - Bamb_4218 - hypothetical protein 998 67.73 0 1141414..1142445 - 343 115358968 - Bamb_4219 - type III secretion exporter 999 67.28 0 1142470..1143279 - 269 115358969 - Bamb_4220 - type III secretion protein SpaR/YscT/HrcT 1000 74.30 +1 1143273..1143953 - 226 115358970 - Bamb_4221 - hypothetical protein 1001 69.84 0 1143946..1145331 - 461 115358971 - Bamb_4222 - type III secretion apparatus H+-transporting two-sector ATPase 1002 70.00 0 1145328..1145957 - 209 115358972 - Bamb_4223 - HrpE/YscL family type III secretion apparatus protein 1003 72.20 +1 1145939..1146679 - 246 115358973 - Bamb_4224 - hypothetical protein 1004 71.94 +1 1146676..1147605 - 309 115358974 - Bamb_4225 - YscJ/HrcJ family type III secretion apparatus lipoprotein 1005 68.55 0 1147684..1148214 - 176 115358975 - Bamb_4226 - hypothetical protein 1006 72.99 +1 1148661..1150019 - 452 115358976 - Bamb_4227 - YscD/HrpQ family type III secretion apparatus protein 1007 67.45 0 1150000..1152045 - 681 115358977 - Bamb_4228 - YscC/HrcC family type III secretion outer membrane protein 1008 65.23 0 1152045..1152323 - 92 115358978 - Bamb_4229 - HrpO family type III secretion protein 1009 69.73 0 1152320..1154569 - 749 115358979 - Bamb_4230 - type III secretion FHIPEP protein 1010 64.63 0 1154763..1155596 - 277 115358980 - Bamb_4231 - LuxR family transcriptional regulator 1011 66.67 0 1155876..1156781 + 301 115358981 - Bamb_4232 - LuxR family transcriptional regulator 1012 67.09 0 1156860..1158506 - 548 115358982 - Bamb_4233 - natural resistance-associated macrophage protein 1013 66.32 0 1158545..1158832 + 95 115358983 - Bamb_4234 - hypothetical protein 1014 71.06 +1 1159810..1160082 + 90 115358984 - Bamb_4235 - hypothetical protein 1015 69.57 0 1160194..1161672 + 492 115358985 - Bamb_4236 - carbohydrate-selective porin OprB 1016 68.32 0 1161766..1163520 - 584 115358986 - Bamb_4237 - Alpha,alpha-trehalase 1017 67.66 0 1163813..1165228 + 471 115358987 - Bamb_4238 - major facilitator transporter 1018 68.56 0 1165577..1166788 + 403 115358988 - Bamb_4239 - hypothetical protein 1019 61.64 -1 1166891..1167109 - 72 115358989 - Bamb_4240 - hypothetical protein 1020 66.44 0 1167165..1167608 - 147 115358990 - Bamb_4241 - GCN5-related N-acetyltransferase 1021 67.44 0 1167736..1168380 + 214 115358991 - Bamb_4242 - hydrolase 1022 65.97 0 1168793..1169365 + 190 115358992 - Bamb_4243 - hypothetical protein 1023 64.00 0 1169483..1170082 - 199 115358993 - Bamb_4244 - GCN5-related N-acetyltransferase 1024 70.16 0 1170193..1171107 - 304 115358994 - Bamb_4245 - DNA-binding transcriptional regulator LysR 1025 67.47 0 1171217..1172455 + 412 115358995 - Bamb_4246 - diaminopimelate decarboxylase 1026 59.45 -1 1172822..1173874 - 350 115358996 - Bamb_4247 - IS605 family transposase OrfB 1027 65.67 0 1174202..1175002 + 266 115358997 - Bamb_4248 - extracellular solute-binding protein 1028 67.27 0 1175077..1175736 + 219 115358998 - Bamb_4249 - polar amino acid ABC transporter, inner membrane subunit 1029 63.70 0 1175733..1176506 + 257 115358999 - Bamb_4250 - ABC transporter related 1030 69.53 0 1176556..1177743 + 395 115359000 - Bamb_4251 - cystathionine beta-lyase 1031 66.67 0 1177822..1178166 + 114 115359001 - Bamb_4252 - hypothetical protein 1032 68.12 0 1178599..1178943 + 114 115359002 - Bamb_4253 - hypothetical protein 1033 73.39 +1 1178945..1179985 + 346 115359003 - Bamb_4254 - hypothetical protein 1034 69.30 0 1180036..1180719 - 227 115359004 - Bamb_4255 - LuxR family transcriptional regulator 1035 66.09 0 1181002..1181694 + 230 115359005 - Bamb_4256 - hypothetical protein 1036 70.76 0 1182124..1182612 + 162 115359006 - Bamb_4257 - hypothetical protein 1037 70.02 0 1182596..1183042 + 148 115359007 - Bamb_4258 - lysozyme 1038 69.35 0 1183374..1184342 + 322 115359008 - Bamb_4259 - poly (3-hydroxybutyrate) depolymerase 1039 73.11 +1 1184398..1184940 + 180 115359009 - Bamb_4260 - hypothetical protein 1040 69.57 0 1184937..1185557 + 206 115359010 - Bamb_4261 - LigA 1041 64.72 0 1185670..1186287 + 205 115359011 - Bamb_4262 - hypothetical protein 1042 63.92 0 1186358..1186975 + 205 115359012 - Bamb_4263 - hypothetical protein 1043 70.61 0 1187034..1187921 - 295 115359013 - Bamb_4264 - hypothetical protein 1044 71.95 +1 1188049..1189506 + 485 115359014 - Bamb_4265 - GntR family transcriptional regulator 1045 66.60 0 1189549..1190982 - 477 115359015 - Bamb_4266 - putative nicotinate phosphoribosyltransferase 1046 65.99 0 1191057..1192097 - 346 115359016 - Bamb_4267 - bifunctional nicotinamide mononucleotide adenylyltransferase/ADP-ribose pyrophosphatase 1047 66.23 0 1192283..1192735 + 150 115359017 - Bamb_4268 - hypothetical protein 1048 72.22 +1 1192743..1193120 - 125 115359018 - Bamb_4269 - S-adenosylmethionine decarboxylase related 1049 68.90 0 1193263..1194783 - 506 115359019 - Bamb_4270 - hypothetical protein 1050 68.07 0 1194793..1195863 - 356 115359020 - Bamb_4271 - putative virion core protein 1051 62.27 -1 1195890..1196276 - 128 115359021 - Bamb_4272 - hypothetical protein 1052 66.73 0 1196413..1197927 + 504 115359022 - Bamb_4273 - spermidine synthase 1053 71.42 +1 1197927..1199546 + 539 115359023 - Bamb_4274 - hypothetical protein 1054 69.69 0 1199695..1200456 + 253 115359024 - Bamb_4275 - cell wall hydrolase/autolysin 1055 64.36 0 1200506..1200895 + 129 115359025 - Bamb_4276 - hypothetical protein 1056 65.90 0 1200974..1201498 + 174 115359026 - Bamb_4277 - GCN5-related N-acetyltransferase 1057 67.11 0 1201846..1203192 - 448 115359027 - Bamb_4278 - glutamine synthetase, catalytic region 1058 66.31 0 1203339..1203896 - 185 115359028 - Bamb_4279 - XRE family transcriptional regulator 1059 70.89 0 1203922..1205247 - 441 115359029 - Bamb_4280 - FAD dependent oxidoreductase 1060 62.33 -1 1205501..1205938 - 145 115359030 - Bamb_4281 - AsnC family transcriptional regulator 1061 68.60 0 1205935..1206864 - 309 115359031 - Bamb_4282 - homocysteine S-methyltransferase 1062 64.62 0 1206968..1208137 - 389 115359032 - Bamb_4283 - cystathionine gamma-synthase 1063 64.66 0 1208182..1208877 - 231 115359033 - Bamb_4284 - polar amino acid ABC transporter, inner membrane subunit 1064 62.83 -1 1208891..1209568 - 225 115359034 - Bamb_4285 - polar amino acid ABC transporter, inner membrane subunit 1065 63.46 0 1209640..1210419 - 259 115359035 - Bamb_4286 - extracellular solute-binding protein 1066 63.16 0 1210451..1211248 - 265 115359036 - Bamb_4287 - ABC transporter related 1067 67.71 0 1211329..1212759 - 476 115359037 - Bamb_4288 - aldehyde dehydrogenase 1068 66.49 0 1212756..1213880 - 374 115359038 - Bamb_4289 - homoserine dehydrogenase 1069 61.85 -1 1213987..1214484 - 165 115359039 - Bamb_4290 - AsnC family transcriptional regulator 1070 67.65 0 1214516..1215226 - 236 115359040 - Bamb_4291 - hypothetical protein 1071 59.13 -1 1215720..1216064 - 114 115359041 - Bamb_4292 - small multidrug resistance protein 1072 60.21 -1 1216126..1217829 - 567 115359042 - Bamb_4293 - glucose-methanol-choline oxidoreductase 1073 57.86 -2 1217923..1218762 - 279 115359043 - Bamb_4294 - binding-protein-dependent transport systems inner membrane component 1074 59.62 -1 1218767..1220029 - 420 115359044 - Bamb_4295 - binding-protein-dependent transport systems inner membrane component 1075 58.96 -1 1220047..1221084 - 345 115359045 - Bamb_4296 - ABC spermidine/putrescine transporter, periplasmic ligand binding protein 1076 57.08 -2 1221119..1222213 - 364 115359046 - Bamb_4297 - spermidine/putrescine ABC transporter ATPase subunit 1077 61.70 -1 1222393..1224891 - 832 115359047 - Bamb_4298 - L-carnitine dehydratase/bile acid-inducible protein F 1078 58.61 -2 1225163..1226068 - 301 115359048 - Bamb_4299 - LysR family transcriptional regulator 1079 59.10 -1 1226255..1228264 - 669 115359049 - Bamb_4300 - Beta-glucosidase 1080 58.50 -2 1228339..1229820 - 493 115359050 - Bamb_4301 - hypothetical protein 1081 59.94 -1 1230106..1230417 - 103 115359051 - Bamb_4302 - putative methyl-accepting chemotaxis sensory transducer 1082 66.03 0 1230453..1231859 - 468 115359052 - Bamb_4303 - major facilitator transporter 1083 67.56 0 1231979..1233541 - 520 115359053 - Bamb_4304 - monooxygenase, FAD-binding 1084 65.75 0 1233547..1234422 - 291 115359054 - Bamb_4305 - 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase 1085 66.67 0 1234419..1235354 - 311 115359055 - Bamb_4306 - glyoxalase/bleomycin resistance protein/dioxygenase 1086 65.81 0 1235351..1236406 - 351 115359056 - Bamb_4307 - aminocarboxymuconate-semialdehyde decarboxylase 1087 69.25 0 1236399..1236824 - 141 115359057 - Bamb_4308 - hypothetical protein 1088 63.25 0 1236992..1237723 + 243 115359058 - Bamb_4309 - GntR family transcriptional regulator 1089 57.03 -2 1238076..1238843 + 255 115359059 - Bamb_4311 - hypothetical protein 66.96 MEAN 4.07 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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