version 1.0
Burkholderia cepacia AMMD chromosome 1, complete sequence - 1..3556545 3213 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 903 58.76 -1 994982..995272 + 96 115350959 - Bamb_0905 - hypothetical protein 904 55.94 -2 995527..995787 + 86 115350960 - Bamb_0906 - hypothetical protein 905 59.58 -1 996458..997798 - 446 115350961 - Bamb_0907 - hypothetical protein 906 64.47 0 999170..999670 + 166 115350962 - Bamb_0908 - hypothetical protein 907 64.14 0 999675..999872 + 65 115350963 - Bamb_0909 - phage transcriptional regulator, AlpA 908 55.36 -2 1000007..1000519 - 170 115350964 - Bamb_0910 - hypothetical protein 909 54.59 -2 1000780..1001541 - 253 115350965 - Bamb_0911 - hypothetical protein 910 64.90 0 1002058..1003299 - 413 115350966 - Bamb_0912 - phage integrase family protein 911 70.01 0 1003850..1004566 - 238 115350967 - Bamb_0913 - phosphoglycolate phosphatase 912 65.52 0 1004580..1005278 - 232 115350968 - Bamb_0914 - 3-demethylubiquinone-9 3-methyltransferase 913 61.73 -1 1005433..1006101 - 222 115350969 - Bamb_0915 - OmpA/MotB domain-containing protein 914 64.48 0 1006639..1009242 + 867 115350970 - Bamb_0916 - DNA gyrase subunit A 915 61.86 -1 1009323..1009925 + 200 115350971 - Bamb_0917 - hypothetical protein 916 65.47 0 1010087..1011169 + 360 115350972 - Bamb_0918 - phosphoserine aminotransferase 917 68.33 0 1011204..1012286 + 360 115350973 - Bamb_0919 - chorismate mutase 918 71.31 +1 1012410..1013399 + 329 115350974 - Bamb_0920 - prephenate dehydrogenase 919 67.97 0 1013413..1014717 + 434 115350975 - Bamb_0921 - 3-phosphoshikimate 1-carboxyvinyltransferase 920 66.81 0 1014731..1015417 + 228 115350976 - Bamb_0922 - cytidylate kinase 921 60.31 -1 1015542..1017272 + 576 115350977 rpsA Bamb_0923 - 30S ribosomal protein S1 922 61.73 -1 1017295..1017618 + 107 115350978 ihfB Bamb_0924 - integration host factor subunit beta 923 63.61 0 1017829..1018122 + 97 115350979 - Bamb_0925 - hypothetical protein 924 64.11 0 1018176..1019348 + 390 115350980 - Bamb_0926 - hypothetical protein 925 65.88 0 1019439..1020839 + 466 115350981 - Bamb_0927 - UDP-glucose 6-dehydrogenase 926 67.72 0 1020847..1021797 + 316 115350982 - Bamb_0928 - rfaE bifunctional protein 927 63.65 0 1021853..1022845 + 330 115350983 - Bamb_0929 - ADP-L-glycero-D-manno-heptose-6-epimerase 928 68.12 0 1022919..1023263 + 114 115350984 - Bamb_0930 - helix-hairpin-helix DNA-binding motif-containing protein 929 64.89 0 1023449..1024351 + 300 115350985 cysM Bamb_0931 - cysteine synthase B 930 66.00 0 1024428..1025774 - 448 115350986 - Bamb_0932 - lytic murein transglycosylase B 931 66.56 0 1025818..1026741 + 307 115350987 - Bamb_0933 - histone deacetylase superfamily protein 932 71.34 +1 1026768..1027730 - 320 115350988 - Bamb_0934 - alpha/beta hydrolase fold 933 67.05 0 1027904..1028938 + 344 115350989 - Bamb_0935 - ABC transporter related 934 66.97 0 1028928..1029581 + 217 115350990 - Bamb_0936 - binding-protein-dependent transport systems inner membrane component 935 65.66 0 1029610..1030404 + 264 115350991 - Bamb_0937 - YaeC family lipoprotein 936 64.00 0 1030634..1031383 + 249 115350992 - Bamb_0938 - electron transfer flavoprotein beta-subunit 937 65.06 0 1031400..1032335 + 311 115350993 - Bamb_0939 - electron transfer flavoprotein, alpha subunit 938 67.29 0 1032668..1033954 - 428 115350994 - Bamb_0940 - D-amino acid dehydrogenase small subunit 939 58.65 -1 1034040..1034588 + 182 115350995 - Bamb_0941 - AsnC family transcriptional regulator 940 67.43 0 1034698..1035876 + 392 115350996 - Bamb_0942 - radical SAM domain-containing protein 941 66.48 0 1035893..1036429 - 178 115350997 - Bamb_0943 - hypothetical protein 942 69.82 0 1036470..1037609 - 379 115350998 - Bamb_0944 - glucose/sorbosone dehydrogenases-like protein 943 61.57 -1 1037763..1038017 + 84 115350999 rpsP Bamb_0945 - 30S ribosomal protein S16 944 65.27 0 1038027..1038740 + 237 115351000 rimM Bamb_0946 - 16S rRNA-processing protein 945 65.03 0 1038737..1039531 + 264 115351001 trmD Bamb_0947 - tRNA (guanine-N(1)-)-methyltransferase 946 59.29 -1 1039665..1040057 + 130 115351002 rplS Bamb_0948 - 50S ribosomal protein L19 947 67.10 0 1040144..1040830 + 228 115351003 - Bamb_0949 - NUDIX hydrolase 948 64.00 0 1040951..1041889 + 312 115351004 - Bamb_0950 - adenosylcobinamide-phosphate synthase 949 71.07 0 1041975..1042292 - 105 115351005 - Bamb_0951 - hypothetical protein 950 68.26 0 1042345..1043286 - 313 115351006 - Bamb_0952 - ribosome-associated GTPase 951 66.43 0 1043283..1044542 - 419 115351007 - Bamb_0953 - Ste24 endopeptidase 952 65.86 0 1044642..1045262 + 206 115351008 - Bamb_0954 - oligoribonuclease 953 69.79 0 1045297..1045905 - 202 115351009 mogA Bamb_0955 - molybdenum cofactor biosynthesis protein 954 67.48 0 1045889..1046500 - 203 115351010 - Bamb_0956 - hypothetical protein 955 68.78 0 1046622..1047992 + 456 115351011 - Bamb_0957 - peptidase U62, modulator of DNA gyrase 956 68.71 0 1048080..1048667 - 195 115351012 - Bamb_0958 - dihydrofolate reductase 957 62.24 -1 1048863..1049246 - 127 115351013 - Bamb_0959 - hypothetical protein 958 67.53 0 1049696..1051093 + 465 115351014 - Bamb_0960 - sigma-54 dependent trancsriptional regulator 959 66.26 0 1051136..1052107 + 323 115351015 - Bamb_0961 - thymidylate synthase 960 72.77 +1 1052216..1054786 - 856 115351016 - Bamb_0962 - hypothetical protein 961 74.15 +1 1054949..1055656 - 235 115351017 - Bamb_0963 - ArsR family transcriptional regulator 962 70.76 0 1055803..1055973 + 56 115351018 - Bamb_0964 - hypothetical protein 963 66.28 0 1056118..1056630 + 170 115351019 - Bamb_0965 - thioesterase superfamily protein 964 67.96 0 1056686..1058080 - 464 115351020 fumC Bamb_0966 - fumarate hydratase 965 71.06 0 1058237..1059625 - 462 115351021 - Bamb_0967 - MATE efflux family protein 966 63.64 0 1059754..1060017 - 87 115351022 - Bamb_0968 - hypothetical protein 967 70.56 0 1060260..1060670 + 136 115351023 - Bamb_0969 - hypothetical protein 968 67.57 0 1060786..1061562 - 258 115351024 - Bamb_0970 - hypothetical protein 969 69.91 0 1061720..1062058 - 112 115351025 - Bamb_0971 - branched-chain amino acid transport 970 70.41 0 1062055..1062828 - 257 115351026 - Bamb_0972 - AzlC family protein 971 70.87 0 1062951..1063853 - 300 115351027 - Bamb_0973 - AraC family transcriptional regulator 972 66.87 0 1063915..1064400 - 161 115351028 - Bamb_0974 - CreA family protein 973 61.11 -1 1064836..1065159 - 107 115351029 - Bamb_0975 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 974 63.42 0 1065447..1066646 + 399 115351030 - Bamb_0976 - nicotinate phosphoribosyltransferase 975 72.10 +1 1066733..1067395 + 220 115351031 - Bamb_0977 - hypothetical protein 976 67.30 0 1067448..1068878 + 476 115351032 - Bamb_0978 - Na+/H+ antiporter NhaD and related arsenite permeases-like protein 977 69.29 0 1068960..1069949 + 329 115351033 - Bamb_0979 - D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 978 68.82 0 1069946..1071433 + 495 115351034 - Bamb_0980 - hypothetical protein 979 68.11 0 1071528..1072013 - 161 115351035 - Bamb_0981 - GCN5-related N-acetyltransferase 980 63.41 0 1072010..1072285 - 91 115351036 - Bamb_0982 - hypothetical protein 981 72.53 +1 1072323..1073618 - 431 115351037 - Bamb_0983 - molybdenum cofactor synthesis domain-containing protein 982 71.52 +1 1073724..1074341 - 205 115351038 mobA Bamb_0984 - molybdopterin-guanine dinucleotide biosynthesis protein A 983 69.72 0 1074370..1075482 - 370 115351039 moaA Bamb_0985 - molybdenum cofactor biosynthesis protein A 984 69.66 0 1075614..1078820 - 1068 115351040 - Bamb_0986 - ribonuclease 985 62.45 -1 1079179..1079415 + 78 115351041 - Bamb_0987 - ribosomal large subunit pseudouridine synthase C 986 66.17 0 1079542..1080546 + 334 115351042 - Bamb_0988 - RluA family pseudouridine synthase 987 68.31 0 1080543..1081211 + 222 115351043 - Bamb_0989 - HAD family hydrolase 988 71.78 +1 1081208..1081618 + 136 115351044 - Bamb_0990 - Rieske (2Fe-2S) domain-containing protein 989 66.77 0 1081631..1082623 + 330 115351045 - Bamb_0991 - peptidase S49 990 68.33 0 1082694..1083416 - 240 115351046 - Bamb_0992 - uroporphyrin-III C/tetrapyrrole methyltransferase 991 69.84 0 1083413..1084042 - 209 115351047 - Bamb_0993 - Maf-like protein 992 61.79 -1 1084285..1084920 + 211 115351048 - Bamb_0994 - hypothetical protein 993 58.33 -2 1085019..1085198 + 59 115351049 rpmF Bamb_0995 - 50S ribosomal protein L32 994 64.68 0 1085328..1086434 + 368 115351050 - Bamb_0996 - putative glycerol-3-phosphate acyltransferase PlsX 995 66.77 0 1086435..1087424 + 329 115351051 - Bamb_0997 - 3-oxoacyl-(acyl carrier protein) synthase III 996 68.70 0 1087510..1088442 + 310 115351052 - Bamb_0998 - malonyl CoA-acyl carrier protein transacylase 997 68.27 0 1088479..1089228 + 249 115351053 fabG Bamb_0999 - 3-ketoacyl-(acyl-carrier-protein) reductase 998 54.58 -2 1089373..1089612 + 79 115351054 acpP Bamb_1000 - acyl carrier protein 999 65.17 0 1089742..1091007 + 421 115351055 - Bamb_1001 - 3-oxoacyl-(acyl carrier protein) synthase II 1000 74.41 +1 1091020..1091484 + 154 115351056 - Bamb_1002 - hypothetical protein 1001 60.17 -1 1091576..1092175 + 199 115351057 - Bamb_1003 - RNA polymerase sigma factor RpoE 1002 69.68 0 1092251..1092880 + 209 115351058 - Bamb_1004 - anti sigma-E protein, RseA 66.92 MEAN 4.28 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.