version 1.0
Burkholderia cepacia AMMD chromosome 1, complete sequence - 1..3556545 3213 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 839 66.06 0 928460..929620 - 386 115350895 - Bamb_0841 - alkane 1-monooxygenase 840 66.67 0 930295..930810 + 171 115350896 - Bamb_0842 - GCN5-related N-acetyltransferase 841 64.97 0 930967..931731 + 254 115350897 - Bamb_0843 - septum formation inhibitor 842 63.60 0 931791..932606 + 271 115350898 - Bamb_0844 - septum site-determining protein MinD 843 61.57 -1 932619..932873 + 84 115350899 - Bamb_0845 - cell division topological specificity factor MinE 844 69.90 0 933042..933443 + 133 115350900 - Bamb_0846 - hypothetical protein 845 63.96 0 933456..933566 + 36 115350901 - Bamb_0847 - hypothetical protein 846 70.56 0 933560..935125 - 521 115350902 - Bamb_0848 - Cl- channel, voltage-gated family protein 847 70.77 0 935296..936294 + 332 115350903 - Bamb_0849 - lipopolysaccharide heptosyltransferase I 848 68.89 0 936343..936522 - 59 115350904 - Bamb_0850 - hypothetical protein 849 69.18 0 936627..937940 - 437 115350905 - Bamb_0851 - general substrate transporter 850 69.44 0 938252..938755 - 167 115350906 - Bamb_0852 - TonB family protein 851 64.29 0 938984..939277 - 97 115350907 - Bamb_0853 - hypothetical protein 852 66.92 0 939435..939836 - 133 115350908 - Bamb_0854 - hypothetical protein 853 66.83 0 940125..941339 - 404 115350909 - Bamb_0855 - coproporphyrinogen III oxidase 854 70.00 0 941374..942003 - 209 115350910 - Bamb_0856 - putative deoxyribonucleotide triphosphate pyrophosphatase 855 68.56 0 941996..942736 - 246 115350911 rph Bamb_0857 - ribonuclease PH 856 66.56 0 942911..943834 + 307 115350912 - Bamb_0858 - hypothetical protein 857 64.77 0 943916..944599 + 227 115350913 gmk Bamb_0859 - guanylate kinase 858 63.24 0 944658..944861 + 67 115350914 - Bamb_0860 - DNA-directed RNA polymerase subunit omega 859 65.15 0 944925..947291 + 788 115350915 - Bamb_0861 - (p)ppGpp synthetase I, SpoT/RelA 860 65.78 0 947976..948539 + 187 115350916 greB Bamb_0862 - transcription elongation factor GreB 861 65.00 0 948642..949784 - 380 115350917 - Bamb_0863 - porin 862 65.53 0 950292..950555 - 87 115350918 - Bamb_0864 - hypothetical protein 863 49.02 -2 950946..951149 + 67 115350919 - Bamb_0865 - cold-shock DNA-binding domain-containing protein 864 69.33 0 951312..952439 + 375 115350920 - Bamb_0866 - DNA polymerase III, epsilon subunit 865 71.04 0 952476..953069 - 197 115350921 - Bamb_0867 - chorismate mutase 866 61.90 -1 953290..953436 - 48 115350922 - Bamb_0868 - hypothetical protein 867 67.95 0 953556..954023 + 155 115350923 - Bamb_0869 - hypothetical protein 868 68.79 0 954151..956505 + 784 115350924 - Bamb_0870 - TonB-dependent receptor 869 70.48 0 956493..957752 + 419 115350925 - Bamb_0871 - hypothetical protein 870 69.77 0 957749..958231 + 160 115350926 - Bamb_0872 - hypothetical protein 871 64.31 0 958314..958568 - 84 115350927 - Bamb_0873 - transglycosylase-associated protein 872 66.20 0 958830..959042 - 70 115350928 - Bamb_0874 - hypothetical protein 873 68.10 0 959039..960784 - 581 115350929 - Bamb_0875 - hypothetical protein 874 68.52 0 960959..961768 - 269 115350930 - Bamb_0876 - LuxR family transcriptional regulator 875 64.71 0 962241..963260 - 339 115350931 - Bamb_0877 - fructose-1,6-bisphosphatase 876 68.41 0 963549..966242 - 897 115350932 - Bamb_0878 - aminopeptidase N 877 70.66 0 966430..967131 + 233 115350933 - Bamb_0879 - hypothetical protein 878 66.97 0 967204..967860 - 218 115350934 - Bamb_0880 - hypothetical protein 879 69.55 0 968099..969415 - 438 115350935 - Bamb_0881 - guanine deaminase 880 72.90 +1 969412..969732 - 106 115350936 - Bamb_0882 - hypothetical protein 881 65.98 0 969823..970848 - 341 115350937 - Bamb_0883 - adenosine deaminase 882 70.75 0 970867..971871 - 334 115350938 - Bamb_0884 - hypothetical protein 883 66.86 0 972506..973018 - 170 115350939 - Bamb_0885 - disulfide bond formation protein B 884 73.42 +1 973162..974538 - 458 115350940 - Bamb_0886 - amidase 885 67.82 0 974546..975322 - 258 115350941 - Bamb_0887 - GntR family transcriptional regulator 886 69.00 0 975445..976728 + 427 115350942 - Bamb_0888 - peptidase C26 887 68.20 0 976893..977543 + 216 115350943 - Bamb_0889 - hypothetical protein 888 69.82 0 977621..978604 - 327 115350944 - Bamb_0890 - hypothetical protein 889 65.90 0 978824..980119 + 431 115350945 - Bamb_0891 - general substrate transporter 890 71.38 +1 980194..982104 - 636 115350946 - Bamb_0892 - TPR repeat-containing protein 891 71.45 +1 982163..983815 + 550 115350947 - Bamb_0893 - monooxygenase, FAD-binding 892 67.86 0 983824..984075 - 83 115350948 - Bamb_0894 - formate dehydrogenase, delta subunit 893 67.28 0 984083..987034 - 983 115350949 - Bamb_0895 - formate dehydrogenase, alpha subunit 894 70.09 0 987052..988629 - 525 115350950 - Bamb_0896 - NADH dehydrogenase (quinone) 895 72.46 +1 988626..989126 - 166 115350951 - Bamb_0897 - NADH-ubiquinone oxidoreductase 24 kD subunit-like protein 896 70.73 0 989258..990364 + 368 115350952 - Bamb_0898 - molybdate metabolism transcriptional regulator 897 64.44 0 990465..990734 + 89 115350953 - Bamb_0899 - hypothetical protein 898 67.80 0 991060..991413 + 117 115350954 - Bamb_0900 - hypothetical protein 899 52.07 -2 991833..992990 - 385 115350955 - Bamb_0901 - hypothetical protein 900 60.55 -1 993180..993866 - 228 115350956 - Bamb_0902 - hypothetical protein 901 59.81 -1 993916..994644 + 242 115350957 - Bamb_0903 - hypothetical protein 902 61.90 -1 994686..994979 + 97 115350958 - Bamb_0904 - hypothetical protein 903 58.76 -1 994982..995272 + 96 115350959 - Bamb_0905 - hypothetical protein 904 55.94 -2 995527..995787 + 86 115350960 - Bamb_0906 - hypothetical protein 905 59.58 -1 996458..997798 - 446 115350961 - Bamb_0907 - hypothetical protein 906 64.47 0 999170..999670 + 166 115350962 - Bamb_0908 - hypothetical protein 907 64.14 0 999675..999872 + 65 115350963 - Bamb_0909 - phage transcriptional regulator, AlpA 908 55.36 -2 1000007..1000519 - 170 115350964 - Bamb_0910 - hypothetical protein 909 54.59 -2 1000780..1001541 - 253 115350965 - Bamb_0911 - hypothetical protein 910 64.90 0 1002058..1003299 - 413 115350966 - Bamb_0912 - phage integrase family protein 911 70.01 0 1003850..1004566 - 238 115350967 - Bamb_0913 - phosphoglycolate phosphatase 912 65.52 0 1004580..1005278 - 232 115350968 - Bamb_0914 - 3-demethylubiquinone-9 3-methyltransferase 913 61.73 -1 1005433..1006101 - 222 115350969 - Bamb_0915 - OmpA/MotB domain-containing protein 914 64.48 0 1006639..1009242 + 867 115350970 - Bamb_0916 - DNA gyrase subunit A 915 61.86 -1 1009323..1009925 + 200 115350971 - Bamb_0917 - hypothetical protein 916 65.47 0 1010087..1011169 + 360 115350972 - Bamb_0918 - phosphoserine aminotransferase 917 68.33 0 1011204..1012286 + 360 115350973 - Bamb_0919 - chorismate mutase 918 71.31 +1 1012410..1013399 + 329 115350974 - Bamb_0920 - prephenate dehydrogenase 919 67.97 0 1013413..1014717 + 434 115350975 - Bamb_0921 - 3-phosphoshikimate 1-carboxyvinyltransferase 920 66.81 0 1014731..1015417 + 228 115350976 - Bamb_0922 - cytidylate kinase 921 60.31 -1 1015542..1017272 + 576 115350977 rpsA Bamb_0923 - 30S ribosomal protein S1 922 61.73 -1 1017295..1017618 + 107 115350978 ihfB Bamb_0924 - integration host factor subunit beta 923 63.61 0 1017829..1018122 + 97 115350979 - Bamb_0925 - hypothetical protein 924 64.11 0 1018176..1019348 + 390 115350980 - Bamb_0926 - hypothetical protein 925 65.88 0 1019439..1020839 + 466 115350981 - Bamb_0927 - UDP-glucose 6-dehydrogenase 926 67.72 0 1020847..1021797 + 316 115350982 - Bamb_0928 - rfaE bifunctional protein 927 63.65 0 1021853..1022845 + 330 115350983 - Bamb_0929 - ADP-L-glycero-D-manno-heptose-6-epimerase 928 68.12 0 1022919..1023263 + 114 115350984 - Bamb_0930 - helix-hairpin-helix DNA-binding motif-containing protein 929 64.89 0 1023449..1024351 + 300 115350985 cysM Bamb_0931 - cysteine synthase B 930 66.00 0 1024428..1025774 - 448 115350986 - Bamb_0932 - lytic murein transglycosylase B 931 66.56 0 1025818..1026741 + 307 115350987 - Bamb_0933 - histone deacetylase superfamily protein 932 71.34 +1 1026768..1027730 - 320 115350988 - Bamb_0934 - alpha/beta hydrolase fold 933 67.05 0 1027904..1028938 + 344 115350989 - Bamb_0935 - ABC transporter related 934 66.97 0 1028928..1029581 + 217 115350990 - Bamb_0936 - binding-protein-dependent transport systems inner membrane component 935 65.66 0 1029610..1030404 + 264 115350991 - Bamb_0937 - YaeC family lipoprotein 936 64.00 0 1030634..1031383 + 249 115350992 - Bamb_0938 - electron transfer flavoprotein beta-subunit 937 65.06 0 1031400..1032335 + 311 115350993 - Bamb_0939 - electron transfer flavoprotein, alpha subunit 938 67.29 0 1032668..1033954 - 428 115350994 - Bamb_0940 - D-amino acid dehydrogenase small subunit 66.92 MEAN 4.28 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.