version 1.0
Burkholderia cepacia AMMD chromosome 1, complete sequence - 1..3556545 3213 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 750 60.74 -1 834153..835046 + 297 115350806 - Bamb_0752 - glucose-1-phosphate thymidylyltransferase 751 59.60 -1 835031..835582 + 183 115350807 - Bamb_0753 - dTDP-4-dehydrorhamnose 3,5-epimerase 752 63.66 0 835579..836475 + 298 115350808 - Bamb_0754 - dTDP-4-dehydrorhamnose reductase 753 62.31 -1 836693..838138 + 481 115350809 - Bamb_0755 - mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 754 60.24 -1 838208..838456 + 82 115350810 - Bamb_0756 - hypothetical protein 755 61.40 -1 838456..839784 + 442 115350811 - Bamb_0757 - methyltransferase type 11 756 60.52 -1 839784..843509 + 1241 115350812 - Bamb_0758 - glycosyl transferase, group 1 757 60.04 -1 843522..844562 + 346 115350813 - Bamb_0759 - GDP-mannose 4,6-dehydratase 758 63.29 0 844540..845457 + 305 115350814 - Bamb_0760 - NAD-dependent epimerase/dehydratase 759 63.90 0 845731..846780 + 349 115350815 - Bamb_0761 - glycosyl transferase, group 1 760 63.67 0 846777..848045 + 422 115350816 - Bamb_0762 - glycosyl transferase, group 1 761 69.37 0 848045..849007 + 320 115350817 - Bamb_0763 - NAD-dependent epimerase/dehydratase 762 64.90 0 849013..850029 + 338 115350818 - Bamb_0764 - glycosyl transferase family protein 763 63.50 0 850042..851934 + 630 115350819 - Bamb_0765 - polysaccharide biosynthesis protein CapD 764 61.64 -1 852500..854866 + 788 115350820 - Bamb_0766 - curculin domain-containing protein 765 62.69 0 854931..856037 - 368 115350821 - Bamb_0767 - glycosyl transferase family protein 766 67.55 0 856065..857087 - 340 115350822 - Bamb_0768 - UDP-glucose 4-epimerase 767 69.83 0 857102..858238 - 378 115350823 - Bamb_0769 - glycosyl transferase, group 1 768 69.82 0 858300..859124 - 274 115350824 - Bamb_0770 - glycosyl transferase family protein 769 67.54 0 859121..860377 - 418 115350825 - Bamb_0771 - membrane protein 770 66.94 0 860551..862014 + 487 115350826 - Bamb_0772 - phosphomannomutase 771 71.69 +1 862189..863184 + 331 115350827 - Bamb_0773 - lipopolysaccharide heptosyltransferase I 772 67.68 0 863246..864130 + 294 115350828 - Bamb_0774 - hypothetical protein 773 73.76 +1 864168..865535 + 455 115350829 - Bamb_0775 - 3-deoxy-D-manno-octulosonic-acid transferase 774 65.12 0 865596..866243 - 215 115350830 - Bamb_0776 - urease accessory protein UreG 775 71.37 +1 866258..866938 - 226 115350831 - Bamb_0777 - urease accessory protein UreF 776 70.61 0 866925..867533 - 202 115350832 ureE Bamb_0778 - urease accessory protein UreE 777 67.55 0 867551..869257 - 568 115350833 ureC Bamb_0779 - urease subunit alpha 778 69.61 0 869287..869592 - 101 115350834 ureB Bamb_0780 - urease subunit beta 779 65.68 0 869607..869909 - 100 115350835 ureA Bamb_0781 - urease subunit gamma 780 72.60 +1 870150..871025 - 291 115350836 - Bamb_0782 - urease accessory protein UreD 781 68.98 0 871254..871946 - 230 115350837 - Bamb_0783 - ABC transporter related 782 67.25 0 871951..872808 - 285 115350838 - Bamb_0784 - ABC transporter related 783 67.59 0 872805..873989 - 394 115350839 - Bamb_0785 - inner-membrane translocator 784 70.49 0 873991..875610 - 539 115350840 - Bamb_0786 - inner-membrane translocator 785 64.37 0 875752..877059 - 435 115350841 - Bamb_0787 - branched chain amino acid ABC transporter periplasmic ligand-binding protein 786 66.05 0 877450..877773 - 107 115350842 - Bamb_0788 - rhodanese domain-containing protein 787 64.69 0 877785..878441 - 218 115350843 - Bamb_0789 - protein-L-isoaspartate(D-aspartate) O-methyltransferase 788 65.89 0 878546..878803 - 85 115350844 - Bamb_0790 - hypothetical protein 789 67.74 0 878876..880267 - 463 115350845 - Bamb_0791 - coproporphyrinogen III oxidase 790 75.79 +2 880439..880756 + 105 115350846 - Bamb_0792 - hypothetical protein 791 65.66 0 880891..881484 + 197 115350847 - Bamb_0793 - hypothetical protein 792 65.34 0 881565..882395 + 276 115350848 - Bamb_0794 - undecaprenyl pyrophosphate phosphatase 793 70.31 0 882511..883278 - 255 115350849 trmB Bamb_0795 - tRNA (guanine-N(7))-methyltransferase 794 60.00 -1 883778..884122 + 114 115350850 - Bamb_0796 - protein of unknown function DUF861, cupin_3 795 64.79 0 884707..884919 - 70 115350851 - Bamb_0797 - ribosomal protein S21 796 63.16 0 885211..885495 - 94 115350852 - Bamb_0798 - hypothetical protein 797 61.51 -1 885604..885855 + 83 115350853 - Bamb_0799 - hypothetical protein 798 68.56 0 885972..887132 + 386 115350854 - Bamb_0800 - mandelate racemase/muconate lactonizing protein 799 68.78 0 887137..887892 - 251 115350855 - Bamb_0801 - DeoR family transcriptional regulator 800 66.17 0 887974..888579 + 201 115350856 - Bamb_0802 - nucleoside diphosphate pyrophosphatase 801 70.92 0 888731..889552 + 273 115350857 - Bamb_0803 - silent information regulator protein Sir2 802 68.65 0 889587..890798 - 403 115350858 - Bamb_0804 - peptidase S8 and S53, subtilisin, kexin, sedolisin 803 66.18 0 891182..891595 + 137 115350859 - Bamb_0805 - CrcB protein 804 66.67 0 891620..891970 + 116 115350860 - Bamb_0806 - hypothetical protein 805 66.84 0 891981..892544 - 187 115350861 - Bamb_0807 - protein of unknown function YGGT 806 74.84 +1 892621..893550 - 309 115350862 - Bamb_0808 - NADP oxidoreductase, coenzyme F420-dependent 807 66.12 0 893987..894352 + 121 115350863 - Bamb_0809 - hypothetical protein 808 70.68 0 894456..895127 - 223 115350864 - Bamb_0810 - lysine exporter protein LysE/YggA 809 68.27 0 895162..896718 - 518 115350865 - Bamb_0811 - UbiD family decarboxylase 810 69.97 0 897315..898433 + 372 115350866 - Bamb_0812 - lytic transglycosylase, catalytic 811 59.62 -1 898528..899052 + 174 115350867 - Bamb_0813 - HMG-I and HMG-Y, DNA-binding domain-containing protein 812 57.95 -2 899052..899888 + 278 115350868 - Bamb_0814 - integrase catalytic subunit 813 70.18 0 899990..901186 - 398 115350869 - Bamb_0815 - aminotransferase 814 66.67 0 901257..901694 - 145 115350870 nusB Bamb_0816 - transcription antitermination protein NusB 815 63.95 0 901691..902206 - 171 115350871 ribH Bamb_0817 - riboflavin synthase subunit beta 816 67.10 0 902259..903401 - 380 115350872 - Bamb_0818 - bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein 817 65.51 0 903589..904107 - 172 115350873 - Bamb_0819 - hypothetical protein 818 66.51 0 904290..904919 - 209 115350874 - Bamb_0820 - riboflavin synthase subunit alpha 819 72.55 +1 904934..906055 - 373 115350875 - Bamb_0821 - riboflavin biosynthesis protein RibD 820 69.31 0 906068..907351 - 427 115350876 - Bamb_0822 - glutamate-1-semialdehyde 2,1-aminomutase 821 69.54 0 907542..907994 - 150 115350877 - Bamb_0823 - hypothetical protein 822 71.03 0 908155..909459 + 434 115350878 - Bamb_0824 - Bcr/CflA subfamily drug resistance transporter 823 68.07 0 909567..911495 - 642 115350879 - Bamb_0825 - glucokinase 824 71.81 +1 911473..912153 - 226 115350880 - Bamb_0826 - 6-phosphogluconolactonase 825 67.35 0 912241..913710 - 489 115350881 - Bamb_0827 - glucose-6-phosphate 1-dehydrogenase 826 65.87 0 914140..915387 + 415 115350882 - Bamb_0828 - extracellular solute-binding protein 827 64.96 0 915526..916464 + 312 115350883 - Bamb_0829 - binding-protein-dependent transport systems inner membrane component 828 62.59 -1 916454..917311 + 285 115350884 - Bamb_0830 - binding-protein-dependent transport systems inner membrane component 829 65.86 0 917424..918539 + 371 115350885 - Bamb_0831 - ABC transporter related 830 66.19 0 918630..919253 - 207 115350886 - Bamb_0832 - hypothetical protein 831 72.69 +1 919240..920019 - 259 115350887 - Bamb_0833 - Smr protein/MutS2 832 65.23 0 920156..921196 - 346 115350888 - Bamb_0834 - thioredoxin reductase 833 67.23 0 921420..923729 + 769 115350889 - Bamb_0835 - cell divisionFtsK/SpoIIIE 834 65.80 0 923776..924465 + 229 115350890 lolA Bamb_0836 - outer-membrane lipoprotein carrier protein 835 66.82 0 924732..926042 + 436 115350891 - Bamb_0837 - recombination factor protein RarA 836 66.93 0 926080..926454 - 124 115350892 - Bamb_0838 - hypothetical protein 837 66.21 0 926608..927909 + 433 115350893 - Bamb_0839 - seryl-tRNA synthetase 838 70.68 0 928175..928423 + 82 115350894 - Bamb_0840 - putative methyl-accepting chemotaxis sensory transducer 839 66.06 0 928460..929620 - 386 115350895 - Bamb_0841 - alkane 1-monooxygenase 840 66.67 0 930295..930810 + 171 115350896 - Bamb_0842 - GCN5-related N-acetyltransferase 841 64.97 0 930967..931731 + 254 115350897 - Bamb_0843 - septum formation inhibitor 842 63.60 0 931791..932606 + 271 115350898 - Bamb_0844 - septum site-determining protein MinD 843 61.57 -1 932619..932873 + 84 115350899 - Bamb_0845 - cell division topological specificity factor MinE 844 69.90 0 933042..933443 + 133 115350900 - Bamb_0846 - hypothetical protein 845 63.96 0 933456..933566 + 36 115350901 - Bamb_0847 - hypothetical protein 846 70.56 0 933560..935125 - 521 115350902 - Bamb_0848 - Cl- channel, voltage-gated family protein 847 70.77 0 935296..936294 + 332 115350903 - Bamb_0849 - lipopolysaccharide heptosyltransferase I 848 68.89 0 936343..936522 - 59 115350904 - Bamb_0850 - hypothetical protein 849 69.18 0 936627..937940 - 437 115350905 - Bamb_0851 - general substrate transporter 66.92 MEAN 4.28 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0