version 1.0
Burkholderia cepacia AMMD chromosome 1, complete sequence - 1..3556545 3213 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 627 62.22 -1 705031..705300 - 89 115350683 - Bamb_0629 - prevent-host-death family protein 628 66.39 0 705424..706497 - 357 115350684 - Bamb_0630 - phospho-2-dehydro-3-deoxyheptonate aldolase 629 57.09 -2 706600..706881 - 93 115350685 - Bamb_0631 - hypothetical protein 630 68.49 0 706943..708481 - 512 115350686 - Bamb_0632 - peptidase U62, modulator of DNA gyrase 631 69.57 0 708503..709330 - 275 115350687 - Bamb_0633 - Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 632 71.50 +1 709382..713578 - 1398 115350688 - Bamb_0634 - hypothetical protein 633 71.15 0 713717..716596 + 959 115350689 - Bamb_0635 - (glutamate--ammonia-ligase) adenylyltransferase 634 70.02 0 716697..718994 + 765 115350690 - Bamb_0636 - carbohydrate-binding family V/XII protein 635 71.21 +1 719105..720754 - 549 115350691 - Bamb_0637 - DNA repair protein RecN 636 67.22 0 720774..721676 - 300 115350692 ppnK Bamb_0638 - inorganic polyphosphate/ATP-NAD kinase 637 66.08 0 721807..722829 + 340 115350693 hrcA Bamb_0639 - heat-inducible transcription repressor 638 67.98 0 722967..724031 + 354 115350694 hemH Bamb_0640 - ferrochelatase 639 68.57 0 724061..724534 + 157 115350695 - Bamb_0641 - RNA-binding S4 domain-containing protein 640 59.88 -1 724506..724667 - 53 115350696 - Bamb_0642 - hypothetical protein 641 57.53 -2 724727..724945 - 72 115350697 - Bamb_0643 - hypothetical protein 642 67.40 0 725021..725566 + 181 115350698 - Bamb_0644 - GrpE protein 643 70.98 0 725577..726017 + 146 115350699 - Bamb_0645 - hypothetical protein 644 63.95 0 726164..728116 + 650 115350700 - Bamb_0646 - molecular chaperone DnaK 645 65.88 0 728370..729506 + 378 115350701 - Bamb_0647 - chaperone protein DnaJ 646 69.48 0 729511..731430 + 639 115350702 - Bamb_0648 - anthranilate synthase component I/chorismate-binding protein 647 67.16 0 731582..732397 - 271 115350703 panB Bamb_0649 - 3-methyl-2-oxobutanoate hydroxymethyltransferase 648 66.81 0 732440..733126 - 228 115350704 - Bamb_0650 - deoxynucleoside kinase 649 66.67 0 733123..733665 - 180 115350705 - Bamb_0651 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 650 67.75 0 733701..735086 - 461 115350706 - Bamb_0652 - poly(A) polymerase 651 63.13 0 735254..735931 - 225 115350707 - Bamb_0653 - HAD family hydrolase 652 69.07 0 735943..736899 - 318 115350708 - Bamb_0654 - hypothetical protein 653 66.86 0 736925..737980 + 351 115350709 - Bamb_0655 - phosphoribosylaminoimidazole synthetase 654 68.18 0 738088..738483 + 131 115350710 - Bamb_0656 - hypothetical protein 655 73.12 +1 738523..739716 - 397 115350711 - Bamb_0657 - major facilitator transporter 656 69.34 0 739780..740415 + 211 115350712 - Bamb_0658 - TetR family transcriptional regulator 657 71.90 +1 740434..741408 - 324 115350713 miaA Bamb_0659 - tRNA delta(2)-isopentenylpyrophosphate transferase 658 71.35 +1 741405..743390 - 661 115350714 mutL Bamb_0660 - DNA mismatch repair protein 659 63.70 0 743474..744247 + 257 115350715 - Bamb_0661 - DedA family transmembrane protein 660 66.17 0 744317..745129 - 270 115350716 - Bamb_0662 - MscS mechanosensitive ion channel 661 65.89 0 745249..745632 + 127 115350717 - Bamb_0663 - hypothetical protein 662 60.07 -1 745708..746253 - 181 115350718 - Bamb_0664 - adenylyl-sulfate kinase 663 64.87 0 747022..747855 - 277 115350719 - Bamb_0665 - glutamine amidotransferase, class-II 664 68.79 0 748013..748342 - 109 115350720 - Bamb_0666 - alkylhydroperoxidase 665 72.34 +1 748473..749423 + 316 115350721 - Bamb_0667 - AraC family transcriptional regulator 666 63.06 0 749528..749971 + 147 115350722 - Bamb_0668 - YiaAB two helix domain-containing protein 667 69.99 0 750183..751175 + 330 115350723 - Bamb_0669 - glycosyl transferase family protein 668 67.90 0 751200..752255 + 351 115350724 - Bamb_0670 - hypothetical protein 669 70.67 0 752252..753001 + 249 115350725 - Bamb_0671 - hypothetical protein 670 69.17 0 752998..754155 + 385 115350726 - Bamb_0672 - hypothetical protein 671 66.02 0 754152..754769 + 205 115350727 - Bamb_0673 - phosphoesterase, PA-phosphatase related 672 66.67 0 754766..755713 + 315 115350728 - Bamb_0674 - fatty acid desaturase 673 65.47 0 756060..756809 - 249 115350729 - Bamb_0675 - hypothetical protein 674 62.55 -1 756829..757338 - 169 115350730 - Bamb_0676 - OmpA/MotB domain-containing protein 675 65.66 0 757356..758651 - 431 115350731 tolB Bamb_0677 - translocation protein TolB 676 69.94 0 758760..759827 - 355 115350732 - Bamb_0678 - TolA family protein 677 64.67 0 759824..760273 - 149 115350733 - Bamb_0679 - biopolymer transport protein ExbD/TolR 678 64.88 0 760284..761012 - 242 115350734 - Bamb_0680 - MotA/TolQ/ExbB proton channel 679 68.52 0 761106..761591 - 161 115350735 - Bamb_0681 - 4-hydroxybenzoyl-CoA thioesterase 680 68.94 0 761700..762446 - 248 115350736 - Bamb_0682 - short-chain dehydrogenase/reductase SDR 681 63.50 0 762817..764112 + 431 115350737 glyA Bamb_0683 - serine hydroxymethyltransferase 682 64.17 0 764119..764598 + 159 115350738 - Bamb_0684 - transcriptional regulator NrdR 683 70.05 0 764752..765312 + 186 115350739 - Bamb_0685 - Tfp pilus assembly protein FimT-like protein 684 72.18 +1 765309..765725 + 138 115350740 - Bamb_0686 - hypothetical protein 685 68.57 0 765709..766548 + 279 115350741 - Bamb_0687 - prepilin-type cleavage/methylation-like protein 686 71.58 +1 766655..767203 + 182 115350742 - Bamb_0688 - hypothetical protein 687 68.42 0 767200..767655 + 151 115350743 - Bamb_0689 - putative Tfp pilus assembly protein PilE 688 66.89 0 767758..768201 - 147 115350744 - Bamb_0690 - hypothetical protein 689 67.18 0 768245..768634 - 129 115350745 - Bamb_0691 - membrane protein 690 60.73 -1 768758..769060 - 100 115350746 - Bamb_0692 - protein of unknown function DUF883, ElaB 691 59.15 -1 769376..770014 + 212 115350747 - Bamb_0693 - peroxidase 692 65.74 0 770137..771324 - 395 115350748 - Bamb_0694 - acyl-CoA dehydrogenase domain-containing protein 693 69.32 0 771537..772328 + 263 115350749 - Bamb_0695 - IclR family transcriptional regulator 694 68.37 0 772454..772864 + 136 115350750 - Bamb_0696 - glutathione-dependent formaldehyde-activating, GFA 695 67.14 0 773041..773886 - 281 115350751 - Bamb_0697 - diguanylate phosphodiesterase 696 70.26 0 774239..775906 + 555 115350752 - Bamb_0698 - hypothetical protein 697 70.13 0 775953..776183 + 76 115350753 - Bamb_0699 - hypothetical protein 698 71.15 0 776180..777541 + 453 115350754 - Bamb_0700 - major facilitator transporter 699 68.24 0 777557..778891 + 444 115350755 - Bamb_0701 - homogentisate 1,2-dioxygenase 700 68.81 0 778888..780192 + 434 115350756 - Bamb_0702 - fumarylacetoacetase 701 71.58 +1 780332..781492 - 386 115350757 - Bamb_0703 - major facilitator transporter 702 71.07 0 781712..782461 - 249 115350758 - Bamb_0704 - cob(II)yrinic acid a,c-diamide reductase 703 68.07 0 782586..783584 - 332 115350759 - Bamb_0705 - D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 704 71.33 +1 783615..784601 - 328 115350760 - Bamb_0706 - LysR family transcriptional regulator 705 68.73 0 785357..786568 + 403 115350761 - Bamb_0707 - aminotransferase, class V 706 71.26 +1 786627..787562 - 311 115350762 - Bamb_0708 - AraC family transcriptional regulator 707 68.56 0 787696..788592 + 298 115350763 - Bamb_0709 - hypothetical protein 708 70.78 0 788926..790140 - 404 115350764 - Bamb_0710 - hypothetical protein 709 69.48 0 790489..792051 + 520 115350765 - Bamb_0711 - molybdopterin dehydrogenase, FAD-binding 710 68.70 0 792070..794433 + 787 115350766 - Bamb_0712 - xanthine dehydrogenase 711 72.85 +1 794518..795180 + 220 115350767 - Bamb_0713 - xanthine and Co dehydrogenase maturation factor 712 69.40 0 795277..795678 + 133 115350768 - Bamb_0714 - hypothetical protein 713 69.20 0 795721..796668 - 315 115350769 - Bamb_0715 - LysR family transcriptional regulator 714 66.20 0 796737..797375 - 212 115350770 - Bamb_0716 - DSBA oxidoreductase 715 71.62 +1 797467..798939 - 490 115350771 - Bamb_0717 - TRAP-type uncharacterized transport system periplasmic component-like protein 716 66.94 0 799404..799769 + 121 115350772 - Bamb_0718 - transport-associated 717 71.65 +1 800018..802105 + 695 115350773 - Bamb_0719 - hypothetical protein 718 72.37 +1 802323..803111 - 262 115350774 - Bamb_0720 - hypothetical protein 719 72.65 +1 803458..804192 - 244 115350775 - Bamb_0721 - DSBA oxidoreductase 720 67.04 0 804286..805080 - 264 115350776 - Bamb_0722 - YheO domain-containing protein 721 73.73 +1 805077..806039 - 320 115350777 - Bamb_0723 - ornithine cyclodeaminase/mu-crystallin 722 67.31 0 806420..807199 + 259 115350778 - Bamb_0724 - extracellular solute-binding protein 723 72.45 +1 807267..808511 + 414 115350779 - Bamb_0725 - D-amino-acid dehydrogenase 724 67.84 0 808717..809142 + 141 115350780 - Bamb_0726 - hypothetical protein 725 70.93 0 809186..809701 + 171 115350781 - Bamb_0727 - ECF subfamily RNA polymerase sigma-24 factor 726 73.16 +1 809698..810483 + 261 115350782 - Bamb_0728 - putative transmembrane anti-sigma factor 66.92 MEAN 4.28 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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