version 1.0
Burkholderia cepacia AMMD chromosome 1, complete sequence - 1..3556545 3213 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3012 70.02 0 3335889..3336932 + 347 115353068 - Bamb_3017 - bile acid:sodium symporter 3013 71.78 +1 3337226..3339064 + 612 115353069 - Bamb_3018 - diguanylate cyclase/phosphodiesterase 3014 72.75 +1 3339242..3340261 + 339 115353070 - Bamb_3019 - LacI family transcription regulator 3015 68.15 0 3340258..3341538 + 426 115353071 - Bamb_3020 - N-acylglucosamine 2-epimerase 3016 74.59 +1 3341535..3342443 + 302 115353072 - Bamb_3021 - ribokinase-like domain-containing protein 3017 62.16 -1 3342551..3342772 + 73 115353073 - Bamb_3022 - hypothetical protein 3018 67.14 0 3342850..3343062 - 70 115353074 - Bamb_3023 - hypothetical protein 3019 70.78 0 3343240..3344430 - 396 115353075 - Bamb_3024 - hypothetical protein 3020 77.55 +2 3344444..3345187 + 247 115353076 - Bamb_3025 - short-chain dehydrogenase/reductase SDR 3021 64.69 0 3345264..3345668 + 134 115353077 - Bamb_3026 - dihydroneopterin aldolase 3022 66.57 0 3345665..3346669 + 334 115353078 - Bamb_3027 - PP-loop domain-containing protein 3023 68.80 0 3346804..3348165 + 453 115353079 - Bamb_3028 - UDP-N-acetylglucosamine pyrophosphorylase 3024 67.38 0 3348216..3350033 + 605 115353080 - Bamb_3029 - D-fructose-6-phosphate amidotransferase 3025 62.02 -1 3350175..3350540 + 121 115353081 - Bamb_3030 - hypothetical protein 3026 61.68 -1 3350533..3350853 + 106 115353082 - Bamb_3031 - transcriptional regulator-like protein 3027 71.15 0 3350937..3351404 + 155 115353083 - Bamb_3032 - hypothetical protein 3028 65.75 0 3351404..3351622 + 72 115353084 - Bamb_3033 - hypothetical protein 3029 70.85 0 3351715..3352551 - 278 115353085 - Bamb_3034 - iron permease FTR1 3030 61.86 -1 3352563..3352895 - 110 115353086 - Bamb_3035 - hypothetical protein 3031 68.66 0 3353226..3353426 + 66 115353087 - Bamb_3036 - heavy metal transport/detoxification protein 3032 67.87 0 3353487..3354977 - 496 115353088 - Bamb_3037 - aldehyde dehydrogenase 3033 65.40 0 3355063..3355614 - 183 115353089 - Bamb_3038 - XRE family transcriptional regulator 3034 62.84 0 3356073..3356255 + 60 115353090 - Bamb_3039 - hypothetical protein 3035 69.64 0 3356487..3357326 + 279 115353091 - Bamb_3040 - peptidase C26 3036 65.62 0 3357356..3358693 + 445 115353092 - Bamb_3041 - glutamate--ammonia ligase 3037 66.25 0 3358731..3360164 + 477 115353093 - Bamb_3042 - putative aminotransferase 3038 63.71 0 3360227..3361342 + 371 115353094 - Bamb_3043 - extracellular solute-binding protein 3039 65.28 0 3361533..3362687 + 384 115353095 - Bamb_3044 - spermidine/putrescine ABC transporter ATPase subunit 3040 63.55 0 3362695..3363690 + 331 115353096 - Bamb_3045 - binding-protein-dependent transport systems inner membrane component 3041 64.29 0 3363687..3364526 + 279 115353097 - Bamb_3046 - binding-protein-dependent transport systems inner membrane component 3042 66.54 0 3364628..3366202 + 524 115353098 - Bamb_3047 - hypothetical protein 3043 72.20 +1 3366315..3367634 + 439 115353099 - Bamb_3048 - FAD dependent oxidoreductase 3044 69.28 0 3367660..3368961 + 433 115353100 - Bamb_3049 - FAD dependent oxidoreductase 3045 69.76 0 3369228..3370583 - 451 115353101 - Bamb_3050 - glutathione-disulfide reductase 3046 67.56 0 3370835..3371059 - 74 115353102 - Bamb_3051 - hypothetical protein 3047 65.37 0 3371437..3372591 - 384 115353103 - Bamb_3052 - porin 3048 69.38 0 3372733..3373581 - 282 115353104 - Bamb_3053 - hypothetical protein 3049 69.30 0 3373858..3374199 + 113 115353105 - Bamb_3054 - hypothetical protein 3050 68.56 0 3374248..3374775 - 175 115353106 - Bamb_3055 - chromate transporter 3051 71.87 +1 3374772..3375386 - 204 115353107 - Bamb_3056 - chromate transporter 3052 70.28 0 3375482..3376366 + 294 115353108 - Bamb_3057 - DNA-binding transcriptional activator GcvA 3053 68.97 0 3376407..3377711 - 434 115353109 - Bamb_3058 - uracil-xanthine permease 3054 69.16 0 3378037..3379278 - 413 115353110 flgL Bamb_3059 - flagellar hook-associated protein FlgL 3055 69.27 0 3379301..3381298 - 665 115353111 flgK Bamb_3060 - flagellar hook-associated protein FlgK 3056 68.92 0 3381491..3382246 - 251 115353112 - Bamb_3061 - YcgR family protein 3057 70.80 0 3382458..3383450 - 330 115353113 flgJ Bamb_3062 - peptidoglycan hydrolase 3058 69.55 0 3383451..3384629 - 392 115353114 flgI Bamb_3063 - flagellar basal body P-ring protein 3059 66.52 0 3384635..3385324 - 229 115353115 flgH Bamb_3064 - flagellar basal body L-ring protein 3060 65.53 0 3385346..3386134 - 262 115353116 flgG Bamb_3065 - flagellar basal body rod protein FlgG 3061 68.64 0 3386170..3386928 - 252 115353117 flgF Bamb_3066 - flagellar basal body rod protein FlgF 3062 65.46 0 3386949..3388190 - 413 115353118 flgE Bamb_3067 - flagellar hook protein FlgE 3063 67.74 0 3388219..3388965 - 248 115353119 flgD Bamb_3068 - flagellar basal body rod modification protein 3064 66.67 0 3389056..3389481 - 141 115353120 flgC Bamb_3069 - flagellar basal body rod protein FlgC 3065 67.89 0 3389518..3390006 - 162 115353121 flgB Bamb_3070 - flagellar basal body rod protein FlgB 3066 76.16 +2 3390575..3391522 + 315 162389965 flgA Bamb_3071 - flagellar basal body P-ring biosynthesis protein FlgA 3067 68.47 0 3391641..3391973 + 110 115353123 - Bamb_3072 - putative anti-sigma-28 factor, FlgM 3068 69.84 0 3392059..3392499 + 146 115353124 - Bamb_3073 - FlgN family protein 3069 69.37 0 3392651..3394501 - 616 115353125 - Bamb_3074 - peptidase M24 3070 70.12 0 3394938..3395747 + 269 115353126 - Bamb_3075 - XRE family transcriptional regulator 3071 70.13 0 3395793..3397034 - 413 115353127 cca Bamb_3076 - multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase 3072 67.59 0 3397031..3397678 - 215 115353128 - Bamb_3077 - glutathione S-transferase domain-containing protein 3073 70.62 0 3397734..3398693 - 319 115353129 - Bamb_3078 - NAD-dependent epimerase/dehydratase 3074 68.20 0 3398963..3400915 - 650 115353130 - Bamb_3079 - lytic transglycosylase, catalytic 3075 71.10 0 3400924..3401532 + 202 115353131 - Bamb_3080 - 5-formyltetrahydrofolate cyclo-ligase 3076 62.65 0 3401601..3402173 - 190 115353132 - Bamb_3081 - putative transcriptional regulator 3077 72.60 +1 3402262..3402918 + 218 115353133 - Bamb_3082 - hypothetical protein 3078 73.58 +1 3402915..3403985 + 356 115353134 - Bamb_3083 - urea amidolyase related protein 3079 70.33 0 3404041..3404805 + 254 115353135 - Bamb_3084 - hypothetical protein 3080 71.99 +1 3405363..3406508 - 381 115353136 - Bamb_3085 - GumN family protein 3081 67.75 0 3406501..3407517 - 338 115353137 dppF Bamb_3086 - dipeptide transporter ATP-binding subunit 3082 66.07 0 3407514..3408512 - 332 115353138 - Bamb_3087 - oligopeptide/dipeptide ABC transporter, ATPase subunit 3083 68.85 0 3408515..3409432 - 305 115353139 - Bamb_3088 - binding-protein-dependent transport systems inner membrane component 3084 66.67 0 3409437..3410447 - 336 115353140 - Bamb_3089 - binding-protein-dependent transport systems inner membrane component 3085 62.86 0 3410565..3412193 - 542 115353141 - Bamb_3090 - extracellular solute-binding protein 3086 67.13 0 3412509..3413816 - 435 115353142 - Bamb_3091 - general substrate transporter 3087 64.42 0 3414008..3414319 - 103 115353143 - Bamb_3092 - high potential iron-sulfur protein 3088 70.90 0 3414470..3415579 - 369 115353144 - Bamb_3093 - FAD dependent oxidoreductase 3089 67.79 0 3415704..3416684 - 326 115353145 - Bamb_3094 - ATPase central domain-containing protein 3090 71.37 +1 3417103..3417591 + 162 115353146 - Bamb_3095 - hypothetical protein 3091 70.47 0 3417597..3418412 + 271 115353147 - Bamb_3096 - endonuclease/exonuclease/phosphatase 3092 70.68 0 3418514..3419161 + 215 115353148 - Bamb_3097 - lysine exporter protein LysE/YggA 3093 62.91 0 3419389..3420159 + 256 115353149 - Bamb_3098 - ferredoxin--NADP(+) reductase 3094 72.92 +1 3420576..3421391 + 271 115353150 - Bamb_3099 - putative signal transduction histidine kinase 3095 65.14 0 3421399..3422055 + 218 115353151 - Bamb_3100 - two component LuxR family transcriptional regulator 3096 67.52 0 3422279..3423679 + 466 115353152 - Bamb_3101 - amino acid permease-associated region 3097 70.86 0 3423968..3424993 + 341 115353153 - Bamb_3102 - hypothetical protein 3098 69.54 0 3425085..3425780 - 231 115353154 - Bamb_3103 - PepSY-associated TM helix domain-containing protein 3099 69.78 0 3426084..3426404 - 106 115353155 - Bamb_3104 - putative flagellar protein FhlB 3100 77.83 +2 3426401..3427771 - 456 115353156 - Bamb_3105 - hypothetical protein 3101 69.67 0 3427845..3428177 - 110 115353157 - Bamb_3106 - hypothetical protein 3102 71.26 +1 3428174..3428608 - 144 115353158 - Bamb_3107 - flagellar protein FliS 3103 67.50 0 3428757..3429116 - 119 115353159 - Bamb_3108 - flagellar hook-basal body complex subunit FliE 3104 69.44 0 3429351..3431114 + 587 115353160 fliF Bamb_3109 - flagellar MS-ring protein 3105 65.16 0 3431104..3432099 + 331 115353161 fliG Bamb_3110 - flagellar motor switch protein G 3106 73.98 +1 3432092..3432775 + 227 115353162 fliH Bamb_3111 - flagellar assembly protein H 3107 71.66 +1 3432769..3434310 + 513 115353163 - Bamb_3112 - flagellar protein export ATPase FliI 3108 68.85 0 3434316..3434774 + 152 115353164 - Bamb_3113 - flagellar export protein FliJ 3109 75.37 +1 3434806..3436173 + 455 115353165 - Bamb_3114 - flagellar hook-length control protein 3110 69.71 0 3436207..3437847 - 546 115353166 - Bamb_3115 - glucose-methanol-choline oxidoreductase 3111 63.54 0 3437849..3438136 - 95 115353167 - Bamb_3116 - hypothetical protein 66.92 MEAN 4.28 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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