version 1.0
Burkholderia cepacia AMMD chromosome 1, complete sequence - 1..3556545 3213 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2952 63.48 0 3259758..3260636 - 292 115353008 - Bamb_2957 - hypothetical protein 2953 70.58 0 3261156..3262382 - 408 115353009 - Bamb_2958 - patatin 2954 72.80 +1 3262407..3263156 - 249 115353010 - Bamb_2959 - hypothetical protein 2955 69.32 0 3263236..3264063 - 275 115353011 - Bamb_2960 - enoyl-CoA hydratase 2956 68.68 0 3264182..3265174 - 330 115353012 - Bamb_2961 - fumarylacetoacetate (FAA) hydrolase 2957 70.32 0 3265302..3266177 + 291 115353013 - Bamb_2962 - IclR family transcriptional regulator 2958 69.80 0 3266249..3267622 + 457 115353014 - Bamb_2963 - hypothetical protein 2959 56.98 -2 3267869..3268126 + 85 115353015 - Bamb_2964 - hypothetical protein 2960 67.79 0 3268390..3269457 + 355 115353016 - Bamb_2965 - methionine synthase 2961 65.16 0 3269504..3272221 + 905 115353017 - Bamb_2966 - methionine synthase 2962 66.05 0 3272335..3272658 - 107 115353018 - Bamb_2967 - hypothetical protein 2963 67.90 0 3272860..3274641 + 593 115353019 argS Bamb_2968 - arginyl-tRNA synthetase 2964 68.92 0 3274726..3275613 + 295 115353020 - Bamb_2969 - sporulation domain-containing protein 2965 63.40 0 3275683..3276324 + 213 115353021 - Bamb_2970 - DSBA oxidoreductase 2966 71.71 +1 3276344..3277117 + 257 115353022 - Bamb_2971 - short chain dehydrogenase 2967 65.85 0 3277381..3278976 + 531 115353023 - Bamb_2972 - extracellular solute-binding protein 2968 72.58 +1 3279167..3280807 + 546 115353024 - Bamb_2973 - ABC transporter related 2969 68.23 0 3281156..3282310 - 384 115353025 - Bamb_2974 - beta-lactamase domain-containing protein 2970 62.71 0 3282543..3284411 + 622 115353026 aceK Bamb_2975 - bifunctional isocitrate dehydrogenase kinase/phosphatase protein 2971 67.06 0 3284491..3285261 + 256 115353027 - Bamb_2976 - carbonate dehydratase 2972 70.35 0 3285391..3286068 + 225 115353028 - Bamb_2977 - short chain dehydrogenase 2973 70.78 0 3286108..3286545 + 145 115353029 - Bamb_2978 - hypothetical protein 2974 69.53 0 3286654..3287910 + 418 115353030 - Bamb_2979 - dienelactone hydrolase and related enzyme-like protein 2975 70.58 0 3288695..3290074 + 459 115353031 - Bamb_2980 - adenosylmethionine--8-amino-7-oxononanoate transaminase 2976 71.82 +1 3290071..3291486 + 471 115353032 - Bamb_2981 - 8-amino-7-oxononanoate synthase 2977 72.50 +1 3291483..3292202 + 239 115353033 bioD Bamb_2982 - dithiobiotin synthetase 2978 67.55 0 3292258..3293277 + 339 115353034 - Bamb_2983 - biotin synthase 2979 74.10 +1 3293379..3294104 - 241 115353035 - Bamb_2984 - CutC family protein 2980 71.48 +1 3294203..3295489 - 428 115353036 - Bamb_2985 - diguanylate phosphodiesterase 2981 68.76 0 3295781..3297448 + 555 115353037 - Bamb_2986 - Na+/H+ antiporter 2982 69.42 0 3297781..3299199 + 472 115353038 - Bamb_2987 - glycoside hydrolase family protein 2983 69.52 0 3299337..3302909 - 1190 115353039 - Bamb_2988 - 2-oxoacid ferredoxin oxidoreductase 2984 65.59 0 3305387..3305944 - 185 115353040 - Bamb_2989 - hexapaptide repeat-containing transferase 2985 68.46 0 3306396..3307010 + 204 115353041 - Bamb_2990 - glutathione S-transferase domain-containing protein 2986 66.46 0 3307098..3308063 - 321 115353042 - Bamb_2991 - K+ channel inward rectifier domain-containing protein 2987 66.76 0 3308266..3309285 - 339 115353043 - Bamb_2992 - sulfate ABC transporter, periplasmic sulfate-binding protein 2988 72.15 +1 3309738..3310631 + 297 115353044 - Bamb_2993 - dihydrodipicolinate synthase 2989 73.73 +1 3310764..3311810 - 348 115353045 - Bamb_2994 - LysR family transcriptional regulator 2990 74.10 +1 3311918..3313195 + 425 115353046 - Bamb_2995 - major facilitator transporter 2991 68.80 0 3313239..3315440 - 733 115353047 - Bamb_2996 - TonB-dependent siderophore receptor 2992 71.83 +1 3315609..3316247 - 212 115353048 - Bamb_2997 - glutathione S-transferase domain-containing protein 2993 73.83 +1 3316361..3317281 + 306 115353049 - Bamb_2998 - LysR family transcriptional regulator 2994 71.74 +1 3317287..3319512 - 741 115353050 - Bamb_2999 - aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding 2995 72.95 +1 3319509..3320510 - 333 115353051 - Bamb_3000 - molybdopterin dehydrogenase, FAD-binding 2996 71.43 +1 3320529..3321284 - 251 115353052 - Bamb_3001 - ferredoxin 2997 73.68 +1 3321844..3322128 + 94 115353053 - Bamb_3002 - hypothetical protein 2998 68.51 0 3322179..3324299 + 706 115353054 - Bamb_3003 - phospholipase C 2999 72.28 +1 3324337..3324960 - 207 115353055 - Bamb_3004 - hypothetical protein 3000 66.89 0 3325382..3325819 + 145 115353056 - Bamb_3005 - glyoxalase/bleomycin resistance protein/dioxygenase 3001 72.19 +1 3325824..3326765 + 313 115353057 - Bamb_3006 - D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 3002 68.92 0 3326795..3327727 + 310 115353058 - Bamb_3007 - hydroxymethylglutaryl-CoA lyase 3003 69.63 0 3327750..3328256 + 168 115353059 - Bamb_3008 - YbaK/prolyl-tRNA synthetase associated region 3004 74.40 +1 3328253..3328459 + 68 115353060 - Bamb_3009 - hypothetical protein 3005 69.77 0 3328703..3329605 - 300 115353061 - Bamb_3010 - hypothetical protein 3006 70.53 0 3329719..3330210 + 163 115353062 - Bamb_3011 - AsnC family transcriptional regulator 3007 68.56 0 3330243..3331139 - 298 115353063 - Bamb_3012 - alpha/beta hydrolase fold 3008 66.67 0 3331419..3332378 + 319 115353064 - Bamb_3013 - 2-nitropropane dioxygenase, NPD 3009 67.91 0 3332494..3333456 - 320 115353065 - Bamb_3014 - LysR family transcriptional regulator 3010 65.74 0 3333628..3334704 - 358 115353066 - Bamb_3015 - porin 3011 73.21 +1 3335071..3335559 - 162 115353067 - Bamb_3016 - hypothetical protein 3012 70.02 0 3335889..3336932 + 347 115353068 - Bamb_3017 - bile acid:sodium symporter 3013 71.78 +1 3337226..3339064 + 612 115353069 - Bamb_3018 - diguanylate cyclase/phosphodiesterase 3014 72.75 +1 3339242..3340261 + 339 115353070 - Bamb_3019 - LacI family transcription regulator 3015 68.15 0 3340258..3341538 + 426 115353071 - Bamb_3020 - N-acylglucosamine 2-epimerase 3016 74.59 +1 3341535..3342443 + 302 115353072 - Bamb_3021 - ribokinase-like domain-containing protein 3017 62.16 -1 3342551..3342772 + 73 115353073 - Bamb_3022 - hypothetical protein 3018 67.14 0 3342850..3343062 - 70 115353074 - Bamb_3023 - hypothetical protein 3019 70.78 0 3343240..3344430 - 396 115353075 - Bamb_3024 - hypothetical protein 3020 77.55 +2 3344444..3345187 + 247 115353076 - Bamb_3025 - short-chain dehydrogenase/reductase SDR 3021 64.69 0 3345264..3345668 + 134 115353077 - Bamb_3026 - dihydroneopterin aldolase 3022 66.57 0 3345665..3346669 + 334 115353078 - Bamb_3027 - PP-loop domain-containing protein 3023 68.80 0 3346804..3348165 + 453 115353079 - Bamb_3028 - UDP-N-acetylglucosamine pyrophosphorylase 3024 67.38 0 3348216..3350033 + 605 115353080 - Bamb_3029 - D-fructose-6-phosphate amidotransferase 3025 62.02 -1 3350175..3350540 + 121 115353081 - Bamb_3030 - hypothetical protein 3026 61.68 -1 3350533..3350853 + 106 115353082 - Bamb_3031 - transcriptional regulator-like protein 3027 71.15 0 3350937..3351404 + 155 115353083 - Bamb_3032 - hypothetical protein 3028 65.75 0 3351404..3351622 + 72 115353084 - Bamb_3033 - hypothetical protein 3029 70.85 0 3351715..3352551 - 278 115353085 - Bamb_3034 - iron permease FTR1 3030 61.86 -1 3352563..3352895 - 110 115353086 - Bamb_3035 - hypothetical protein 3031 68.66 0 3353226..3353426 + 66 115353087 - Bamb_3036 - heavy metal transport/detoxification protein 3032 67.87 0 3353487..3354977 - 496 115353088 - Bamb_3037 - aldehyde dehydrogenase 3033 65.40 0 3355063..3355614 - 183 115353089 - Bamb_3038 - XRE family transcriptional regulator 3034 62.84 0 3356073..3356255 + 60 115353090 - Bamb_3039 - hypothetical protein 3035 69.64 0 3356487..3357326 + 279 115353091 - Bamb_3040 - peptidase C26 3036 65.62 0 3357356..3358693 + 445 115353092 - Bamb_3041 - glutamate--ammonia ligase 3037 66.25 0 3358731..3360164 + 477 115353093 - Bamb_3042 - putative aminotransferase 3038 63.71 0 3360227..3361342 + 371 115353094 - Bamb_3043 - extracellular solute-binding protein 3039 65.28 0 3361533..3362687 + 384 115353095 - Bamb_3044 - spermidine/putrescine ABC transporter ATPase subunit 3040 63.55 0 3362695..3363690 + 331 115353096 - Bamb_3045 - binding-protein-dependent transport systems inner membrane component 3041 64.29 0 3363687..3364526 + 279 115353097 - Bamb_3046 - binding-protein-dependent transport systems inner membrane component 3042 66.54 0 3364628..3366202 + 524 115353098 - Bamb_3047 - hypothetical protein 3043 72.20 +1 3366315..3367634 + 439 115353099 - Bamb_3048 - FAD dependent oxidoreductase 3044 69.28 0 3367660..3368961 + 433 115353100 - Bamb_3049 - FAD dependent oxidoreductase 3045 69.76 0 3369228..3370583 - 451 115353101 - Bamb_3050 - glutathione-disulfide reductase 3046 67.56 0 3370835..3371059 - 74 115353102 - Bamb_3051 - hypothetical protein 3047 65.37 0 3371437..3372591 - 384 115353103 - Bamb_3052 - porin 3048 69.38 0 3372733..3373581 - 282 115353104 - Bamb_3053 - hypothetical protein 3049 69.30 0 3373858..3374199 + 113 115353105 - Bamb_3054 - hypothetical protein 3050 68.56 0 3374248..3374775 - 175 115353106 - Bamb_3055 - chromate transporter 3051 71.87 +1 3374772..3375386 - 204 115353107 - Bamb_3056 - chromate transporter 66.92 MEAN 4.28 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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