version 1.0
Burkholderia cepacia AMMD chromosome 1, complete sequence - 1..3556545 3213 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2873 67.19 0 3171771..3172907 + 378 115352929 - Bamb_2878 - cytochrome d ubiquinol oxidase, subunit II 2874 64.23 0 3172963..3173085 + 40 115352930 - Bamb_2879 - cyd operon protein YbgT 2875 70.81 0 3173679..3176162 + 827 115352931 - Bamb_2880 - Beta-N-acetylhexosaminidase 2876 69.00 0 3176473..3178230 - 585 115352932 - Bamb_2881 - PTS system, N-acetylglucosamine-specific IIBC subunit 2877 72.20 +1 3178318..3180900 - 860 115352933 - Bamb_2882 - phosphoenolpyruvate-protein phosphotransferase 2878 71.53 +1 3180916..3181923 - 335 115352934 - Bamb_2883 - glutamine--fructose-6-phosphate transaminase (isomerizing) 2879 69.38 0 3181916..3183019 - 367 115352935 - Bamb_2884 - N-acetylglucosamine-6-phosphate deacetylase 2880 70.88 0 3183137..3183871 - 244 115352936 - Bamb_2885 - GntR family transcriptional regulator 2881 67.69 0 3184200..3187415 - 1071 115352937 dnaE2 Bamb_2886 - error-prone DNA polymerase 2882 75.20 +1 3187422..3188909 - 495 115352938 - Bamb_2887 - hypothetical protein 2883 75.28 +1 3188842..3189549 - 235 115352939 - Bamb_2888 - hypothetical protein 2884 66.99 0 3189754..3190062 + 102 115352940 - Bamb_2889 - hypothetical protein 2885 64.09 0 3190180..3190995 - 271 115352941 - Bamb_2890 - YaeC family lipoprotein 2886 69.92 0 3191172..3192737 - 521 115352942 - Bamb_2891 - methyl-accepting chemotaxis sensory transducer 2887 63.92 0 3192942..3193232 + 96 115352943 - Bamb_2892 - YCII-related 2888 66.34 0 3193392..3194009 - 205 115352944 - Bamb_2893 - electron transport protein SCO1/SenC 2889 65.56 0 3194028..3194930 - 300 115352945 - Bamb_2894 - protoheme IX farnesyltransferase 2890 68.82 0 3194939..3196051 - 370 115352946 - Bamb_2895 - cytochrome oxidase assembly 2891 66.99 0 3196077..3196703 - 208 115352947 - Bamb_2896 - hypothetical protein 2892 66.67 0 3196764..3197807 - 347 115352948 - Bamb_2897 - SURF1 family protein 2893 62.59 -1 3197944..3198801 - 285 115352949 - Bamb_2898 - cytochrome c oxidase, subunit III 2894 67.16 0 3198940..3199140 - 66 115352950 - Bamb_2899 - hypothetical protein 2895 63.22 0 3199157..3199765 - 202 115352951 - Bamb_2900 - cytochrome C oxidase assembly protein 2896 63.81 0 3200021..3201628 - 535 115352952 - Bamb_2901 - cytochrome-c oxidase 2897 64.61 0 3201672..3203279 - 535 115352953 - Bamb_2902 - cytochrome c oxidase, subunit II 2898 64.00 0 3203337..3203861 - 174 115352954 - Bamb_2903 - integral membrane protein-like protein 2899 71.74 +1 3204057..3205022 - 321 115352955 - Bamb_2904 - methyltransferase type 11 2900 73.92 +1 3205107..3205919 + 270 115352956 - Bamb_2905 - phosphoribosyltransferase 2901 70.37 0 3205985..3206497 + 170 115352957 - Bamb_2906 - RNA methyltransferase 2902 70.48 0 3206526..3207050 - 174 115352958 - Bamb_2907 - appr-1-p processing domain-containing protein 2903 72.97 +1 3207157..3208155 - 332 115352959 gpsA Bamb_2908 - NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 2904 61.25 -1 3208182..3208661 - 159 115352960 - Bamb_2909 - preprotein translocase subunit SecB 2905 63.22 0 3208769..3209029 - 86 115352961 - Bamb_2910 - glutaredoxin 3 2906 69.74 0 3209026..3209448 - 140 115352962 - Bamb_2911 - rhodanese domain-containing protein 2907 66.67 0 3209585..3210331 + 248 115352963 - Bamb_2912 - phosphoglycerate mutase 1 family protein 2908 66.02 0 3210607..3212148 + 513 115352964 - Bamb_2913 - carboxyl-terminal protease 2909 69.85 0 3212252..3213004 + 250 115352965 - Bamb_2914 - UBA/THIF-type NAD/FAD binding protein 2910 67.28 0 3213095..3214876 - 593 115352966 - Bamb_2915 - phosphoenolpyruvate-protein phosphotransferase 2911 58.52 -1 3215072..3215341 - 89 115352967 - Bamb_2916 - HPr family phosphocarrier protein 2912 71.34 +1 3215416..3215886 - 156 115352968 - Bamb_2917 - PTS system fructose subfamily IIA component 2913 68.03 0 3216118..3217074 - 318 115352969 - Bamb_2918 - glutathione synthetase 2914 65.81 0 3217100..3218389 - 429 115352970 - Bamb_2919 - glutamate--cysteine ligase 2915 68.81 0 3218634..3220127 - 497 115352971 - Bamb_2920 - ammonium transporter 2916 64.31 0 3220161..3220499 - 112 115352972 - Bamb_2921 - nitrogen regulatory protein P-II 2917 62.30 -1 3220856..3221107 + 83 115352973 - Bamb_2922 - hypothetical protein 2918 75.17 +1 3221363..3222973 + 536 115352974 - Bamb_2923 - Mg chelatase, subunit ChlI 2919 71.55 +1 3223307..3223879 - 190 115352975 - Bamb_2924 - hypothetical protein 2920 64.80 0 3224040..3224576 + 178 115352976 - Bamb_2925 - redoxin domain-containing protein 2921 70.50 0 3224658..3226013 - 451 115352977 - Bamb_2926 - two component, sigma54 specific, Fis family transcriptional regulator 2922 70.48 0 3226093..3228111 - 672 115352978 - Bamb_2927 - periplasmic sensor signal transduction histidine kinase 2923 64.65 0 3228116..3229405 - 429 115352979 - Bamb_2928 - C4-dicarboxylate transporter DctA 2924 68.27 0 3229759..3231444 - 561 115352980 actP Bamb_2929 - acetate permease 2925 69.28 0 3231456..3231761 - 101 115352981 - Bamb_2930 - hypothetical protein 2926 72.14 +1 3232000..3233205 - 401 115352982 - Bamb_2931 - L-carnitine dehydratase/bile acid-inducible protein F 2927 71.38 +1 3233236..3234381 - 381 115352983 - Bamb_2932 - acyl-CoA dehydrogenase domain-containing protein 2928 67.17 0 3234396..3235592 - 398 115352984 - Bamb_2933 - acyl-CoA dehydrogenase domain-containing protein 2929 71.86 +1 3235622..3237757 - 711 115352985 - Bamb_2934 - 3-hydroxyacyl-CoA dehydrogenase, NAD-binding 2930 68.64 0 3237986..3238948 + 320 115352986 - Bamb_2935 - LysR family transcriptional regulator 2931 71.03 0 3239019..3240899 + 626 115352987 - Bamb_2936 - gamma-glutamyltransferase 2932 65.56 0 3241179..3242171 - 330 115352988 - Bamb_2937 - lipoyl synthase 2933 67.33 0 3242164..3242919 - 251 115352989 lipB Bamb_2938 - lipoyltransferase 2934 68.50 0 3243003..3243329 - 108 115352990 - Bamb_2939 - hypothetical protein 2935 67.27 0 3243432..3244418 + 328 115352991 - Bamb_2940 - DNA-binding transcriptional activator GcvA 2936 57.28 -2 3244402..3244710 - 102 115352992 - Bamb_2941 - hypothetical protein 2937 66.02 0 3244710..3245636 - 308 115352993 - Bamb_2942 - aminotransferase, class IV 2938 66.97 0 3245685..3246995 - 436 115352994 - Bamb_2943 - Serine-type D-Ala-D-Ala carboxypeptidase 2939 69.30 0 3247513..3248157 - 214 115352995 - Bamb_2944 - alpha/beta fold family hydrolase-like protein 2940 62.89 0 3248171..3248488 - 105 115352996 - Bamb_2945 - ferredoxin-like protein 2941 73.18 +1 3248643..3249794 - 383 115352997 - Bamb_2946 - VanZ like protein 2942 72.66 +1 3249814..3250530 - 238 115352998 - Bamb_2947 - ABC-type uncharacterized transport system auxiliary component-like protein 2943 69.24 0 3250527..3251459 - 310 115352999 - Bamb_2948 - hypothetical protein 2944 69.63 0 3251483..3252394 - 303 115353000 - Bamb_2949 - ABC transporter related 2945 68.71 0 3252391..3253515 - 374 115353001 - Bamb_2950 - hypothetical protein 2946 67.64 0 3253797..3255857 + 686 115353002 - Bamb_2951 - 5'-nucleotidase domain-containing protein 2947 74.48 +1 3255854..3256711 + 285 115353003 - Bamb_2952 - Sel1 domain-containing protein 2948 74.70 +1 3256908..3257828 + 306 115353004 - Bamb_2953 - biotin--protein ligase 2949 73.00 +1 3257825..3258613 + 262 115353005 - Bamb_2954 - pantothenate kinase 2950 74.49 +1 3258848..3259090 + 80 115353006 - Bamb_2955 - hypothetical protein 2951 67.28 0 3259107..3259592 - 161 115353007 - Bamb_2956 - rfaE bifunctional protein 2952 63.48 0 3259758..3260636 - 292 115353008 - Bamb_2957 - hypothetical protein 2953 70.58 0 3261156..3262382 - 408 115353009 - Bamb_2958 - patatin 2954 72.80 +1 3262407..3263156 - 249 115353010 - Bamb_2959 - hypothetical protein 2955 69.32 0 3263236..3264063 - 275 115353011 - Bamb_2960 - enoyl-CoA hydratase 2956 68.68 0 3264182..3265174 - 330 115353012 - Bamb_2961 - fumarylacetoacetate (FAA) hydrolase 2957 70.32 0 3265302..3266177 + 291 115353013 - Bamb_2962 - IclR family transcriptional regulator 2958 69.80 0 3266249..3267622 + 457 115353014 - Bamb_2963 - hypothetical protein 2959 56.98 -2 3267869..3268126 + 85 115353015 - Bamb_2964 - hypothetical protein 2960 67.79 0 3268390..3269457 + 355 115353016 - Bamb_2965 - methionine synthase 2961 65.16 0 3269504..3272221 + 905 115353017 - Bamb_2966 - methionine synthase 2962 66.05 0 3272335..3272658 - 107 115353018 - Bamb_2967 - hypothetical protein 2963 67.90 0 3272860..3274641 + 593 115353019 argS Bamb_2968 - arginyl-tRNA synthetase 2964 68.92 0 3274726..3275613 + 295 115353020 - Bamb_2969 - sporulation domain-containing protein 2965 63.40 0 3275683..3276324 + 213 115353021 - Bamb_2970 - DSBA oxidoreductase 2966 71.71 +1 3276344..3277117 + 257 115353022 - Bamb_2971 - short chain dehydrogenase 2967 65.85 0 3277381..3278976 + 531 115353023 - Bamb_2972 - extracellular solute-binding protein 2968 72.58 +1 3279167..3280807 + 546 115353024 - Bamb_2973 - ABC transporter related 2969 68.23 0 3281156..3282310 - 384 115353025 - Bamb_2974 - beta-lactamase domain-containing protein 2970 62.71 0 3282543..3284411 + 622 115353026 aceK Bamb_2975 - bifunctional isocitrate dehydrogenase kinase/phosphatase protein 2971 67.06 0 3284491..3285261 + 256 115353027 - Bamb_2976 - carbonate dehydratase 2972 70.35 0 3285391..3286068 + 225 115353028 - Bamb_2977 - short chain dehydrogenase 66.92 MEAN 4.28 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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