version 1.0
Burkholderia cepacia AMMD chromosome 1, complete sequence - 1..3556545 3213 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2844 68.17 0 3143687..3144352 + 221 115352900 - Bamb_2849 - OstA family protein 2845 65.77 0 3144349..3145125 + 258 115352901 - Bamb_2850 - ABC transporter related 2846 64.61 0 3145296..3146801 + 501 115352902 - Bamb_2851 - RNA polymerase factor sigma-54 2847 55.56 -2 3146959..3147318 + 119 115352903 - Bamb_2852 - sigma 54 modulation protein/ribosomal protein S30EA 2848 62.41 -1 3147488..3148027 + 179 115352904 - Bamb_2853 - putative PTS IIA-like nitrogen-regulatory protein PtsN 2849 66.67 0 3148157..3149125 + 322 115352905 - Bamb_2854 - HPr kinase/phosphorylase 2850 64.74 0 3149174..3150109 + 311 115352906 - Bamb_2855 - hypothetical protein 2851 66.19 0 3150136..3150771 + 211 115352907 - Bamb_2856 - peptidase S16, lon domain-containing protein 2852 71.45 +1 3150908..3152014 - 368 115352908 - Bamb_2857 - A/G-specific adenine glycosylase 2853 69.71 0 3152050..3152904 - 284 115352909 - Bamb_2858 - formamidopyrimidine-DNA glycosylase 2854 68.86 0 3152964..3154787 + 607 115352910 - Bamb_2859 - TPR repeat-containing protein 2855 70.37 0 3154787..3155407 + 206 115352911 lolB Bamb_2860 - outer membrane lipoprotein LolB 2856 59.98 -1 3155435..3156316 + 293 115352912 - Bamb_2861 - 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 2857 62.82 0 3156491..3157453 + 320 115352913 - Bamb_2862 - ribose-phosphate pyrophosphokinase 2858 62.07 -1 3157615..3158223 + 202 115352914 - Bamb_2863 - 50S ribosomal protein L25/general stress protein Ctc 2859 68.00 0 3158353..3158952 + 199 115352915 - Bamb_2864 - peptidyl-tRNA hydrolase 2860 66.85 0 3159078..3160145 + 355 115352916 - Bamb_2865 - histidinol-phosphate aminotransferase 2861 60.30 -1 3160250..3160516 - 88 115352917 - Bamb_2866 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 2862 60.04 -1 3160576..3161073 - 165 115352918 coaD Bamb_2867 - phosphopantetheine adenylyltransferase 2863 72.81 +1 3161185..3161868 - 227 115352919 - Bamb_2868 - putative methyltransferase 2864 66.93 0 3162001..3163161 + 386 115352920 - Bamb_2869 - signal recognition particle-docking protein FtsY 2865 64.06 0 3163271..3163960 - 229 115352921 - Bamb_2870 - maleylacetoacetate isomerase 2866 72.27 +1 3164081..3165079 + 332 115352922 - Bamb_2871 - hypothetical protein 2867 68.06 0 3165470..3167116 + 548 115352923 - Bamb_2872 - 2-isopropylmalate synthase 2868 65.36 0 3167260..3167643 - 127 115352924 - Bamb_2873 - hypothetical protein 2869 61.58 -1 3167689..3168258 - 189 115352925 - Bamb_2874 - hypothetical protein 2870 65.38 0 3168619..3169554 + 311 115352926 - Bamb_2875 - RNA polymerase factor sigma-32 2871 64.16 0 3169894..3170172 + 92 115352927 - Bamb_2876 - hypothetical protein 2872 63.62 0 3170162..3171739 + 525 115352928 - Bamb_2877 - cytochrome bd ubiquinol oxidase, subunit I 2873 67.19 0 3171771..3172907 + 378 115352929 - Bamb_2878 - cytochrome d ubiquinol oxidase, subunit II 2874 64.23 0 3172963..3173085 + 40 115352930 - Bamb_2879 - cyd operon protein YbgT 2875 70.81 0 3173679..3176162 + 827 115352931 - Bamb_2880 - Beta-N-acetylhexosaminidase 2876 69.00 0 3176473..3178230 - 585 115352932 - Bamb_2881 - PTS system, N-acetylglucosamine-specific IIBC subunit 2877 72.20 +1 3178318..3180900 - 860 115352933 - Bamb_2882 - phosphoenolpyruvate-protein phosphotransferase 2878 71.53 +1 3180916..3181923 - 335 115352934 - Bamb_2883 - glutamine--fructose-6-phosphate transaminase (isomerizing) 2879 69.38 0 3181916..3183019 - 367 115352935 - Bamb_2884 - N-acetylglucosamine-6-phosphate deacetylase 2880 70.88 0 3183137..3183871 - 244 115352936 - Bamb_2885 - GntR family transcriptional regulator 2881 67.69 0 3184200..3187415 - 1071 115352937 dnaE2 Bamb_2886 - error-prone DNA polymerase 2882 75.20 +1 3187422..3188909 - 495 115352938 - Bamb_2887 - hypothetical protein 2883 75.28 +1 3188842..3189549 - 235 115352939 - Bamb_2888 - hypothetical protein 2884 66.99 0 3189754..3190062 + 102 115352940 - Bamb_2889 - hypothetical protein 2885 64.09 0 3190180..3190995 - 271 115352941 - Bamb_2890 - YaeC family lipoprotein 2886 69.92 0 3191172..3192737 - 521 115352942 - Bamb_2891 - methyl-accepting chemotaxis sensory transducer 2887 63.92 0 3192942..3193232 + 96 115352943 - Bamb_2892 - YCII-related 2888 66.34 0 3193392..3194009 - 205 115352944 - Bamb_2893 - electron transport protein SCO1/SenC 2889 65.56 0 3194028..3194930 - 300 115352945 - Bamb_2894 - protoheme IX farnesyltransferase 2890 68.82 0 3194939..3196051 - 370 115352946 - Bamb_2895 - cytochrome oxidase assembly 2891 66.99 0 3196077..3196703 - 208 115352947 - Bamb_2896 - hypothetical protein 2892 66.67 0 3196764..3197807 - 347 115352948 - Bamb_2897 - SURF1 family protein 2893 62.59 -1 3197944..3198801 - 285 115352949 - Bamb_2898 - cytochrome c oxidase, subunit III 2894 67.16 0 3198940..3199140 - 66 115352950 - Bamb_2899 - hypothetical protein 2895 63.22 0 3199157..3199765 - 202 115352951 - Bamb_2900 - cytochrome C oxidase assembly protein 2896 63.81 0 3200021..3201628 - 535 115352952 - Bamb_2901 - cytochrome-c oxidase 2897 64.61 0 3201672..3203279 - 535 115352953 - Bamb_2902 - cytochrome c oxidase, subunit II 2898 64.00 0 3203337..3203861 - 174 115352954 - Bamb_2903 - integral membrane protein-like protein 2899 71.74 +1 3204057..3205022 - 321 115352955 - Bamb_2904 - methyltransferase type 11 2900 73.92 +1 3205107..3205919 + 270 115352956 - Bamb_2905 - phosphoribosyltransferase 2901 70.37 0 3205985..3206497 + 170 115352957 - Bamb_2906 - RNA methyltransferase 2902 70.48 0 3206526..3207050 - 174 115352958 - Bamb_2907 - appr-1-p processing domain-containing protein 2903 72.97 +1 3207157..3208155 - 332 115352959 gpsA Bamb_2908 - NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 2904 61.25 -1 3208182..3208661 - 159 115352960 - Bamb_2909 - preprotein translocase subunit SecB 2905 63.22 0 3208769..3209029 - 86 115352961 - Bamb_2910 - glutaredoxin 3 2906 69.74 0 3209026..3209448 - 140 115352962 - Bamb_2911 - rhodanese domain-containing protein 2907 66.67 0 3209585..3210331 + 248 115352963 - Bamb_2912 - phosphoglycerate mutase 1 family protein 2908 66.02 0 3210607..3212148 + 513 115352964 - Bamb_2913 - carboxyl-terminal protease 2909 69.85 0 3212252..3213004 + 250 115352965 - Bamb_2914 - UBA/THIF-type NAD/FAD binding protein 2910 67.28 0 3213095..3214876 - 593 115352966 - Bamb_2915 - phosphoenolpyruvate-protein phosphotransferase 2911 58.52 -1 3215072..3215341 - 89 115352967 - Bamb_2916 - HPr family phosphocarrier protein 2912 71.34 +1 3215416..3215886 - 156 115352968 - Bamb_2917 - PTS system fructose subfamily IIA component 2913 68.03 0 3216118..3217074 - 318 115352969 - Bamb_2918 - glutathione synthetase 2914 65.81 0 3217100..3218389 - 429 115352970 - Bamb_2919 - glutamate--cysteine ligase 2915 68.81 0 3218634..3220127 - 497 115352971 - Bamb_2920 - ammonium transporter 2916 64.31 0 3220161..3220499 - 112 115352972 - Bamb_2921 - nitrogen regulatory protein P-II 2917 62.30 -1 3220856..3221107 + 83 115352973 - Bamb_2922 - hypothetical protein 2918 75.17 +1 3221363..3222973 + 536 115352974 - Bamb_2923 - Mg chelatase, subunit ChlI 2919 71.55 +1 3223307..3223879 - 190 115352975 - Bamb_2924 - hypothetical protein 2920 64.80 0 3224040..3224576 + 178 115352976 - Bamb_2925 - redoxin domain-containing protein 2921 70.50 0 3224658..3226013 - 451 115352977 - Bamb_2926 - two component, sigma54 specific, Fis family transcriptional regulator 2922 70.48 0 3226093..3228111 - 672 115352978 - Bamb_2927 - periplasmic sensor signal transduction histidine kinase 2923 64.65 0 3228116..3229405 - 429 115352979 - Bamb_2928 - C4-dicarboxylate transporter DctA 2924 68.27 0 3229759..3231444 - 561 115352980 actP Bamb_2929 - acetate permease 2925 69.28 0 3231456..3231761 - 101 115352981 - Bamb_2930 - hypothetical protein 2926 72.14 +1 3232000..3233205 - 401 115352982 - Bamb_2931 - L-carnitine dehydratase/bile acid-inducible protein F 2927 71.38 +1 3233236..3234381 - 381 115352983 - Bamb_2932 - acyl-CoA dehydrogenase domain-containing protein 2928 67.17 0 3234396..3235592 - 398 115352984 - Bamb_2933 - acyl-CoA dehydrogenase domain-containing protein 2929 71.86 +1 3235622..3237757 - 711 115352985 - Bamb_2934 - 3-hydroxyacyl-CoA dehydrogenase, NAD-binding 2930 68.64 0 3237986..3238948 + 320 115352986 - Bamb_2935 - LysR family transcriptional regulator 2931 71.03 0 3239019..3240899 + 626 115352987 - Bamb_2936 - gamma-glutamyltransferase 2932 65.56 0 3241179..3242171 - 330 115352988 - Bamb_2937 - lipoyl synthase 2933 67.33 0 3242164..3242919 - 251 115352989 lipB Bamb_2938 - lipoyltransferase 2934 68.50 0 3243003..3243329 - 108 115352990 - Bamb_2939 - hypothetical protein 2935 67.27 0 3243432..3244418 + 328 115352991 - Bamb_2940 - DNA-binding transcriptional activator GcvA 2936 57.28 -2 3244402..3244710 - 102 115352992 - Bamb_2941 - hypothetical protein 2937 66.02 0 3244710..3245636 - 308 115352993 - Bamb_2942 - aminotransferase, class IV 2938 66.97 0 3245685..3246995 - 436 115352994 - Bamb_2943 - Serine-type D-Ala-D-Ala carboxypeptidase 2939 69.30 0 3247513..3248157 - 214 115352995 - Bamb_2944 - alpha/beta fold family hydrolase-like protein 2940 62.89 0 3248171..3248488 - 105 115352996 - Bamb_2945 - ferredoxin-like protein 2941 73.18 +1 3248643..3249794 - 383 115352997 - Bamb_2946 - VanZ like protein 2942 72.66 +1 3249814..3250530 - 238 115352998 - Bamb_2947 - ABC-type uncharacterized transport system auxiliary component-like protein 2943 69.24 0 3250527..3251459 - 310 115352999 - Bamb_2948 - hypothetical protein 66.92 MEAN 4.28 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0